Gene

KWMTBOMO07771  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA000897

Annotation

PREDICTED:_NADH_dehydrogenase_[ubiquinone]_1_alpha_subcomplex_subunit_9?_mitochondrial_[Amyelois_transitella]

Location

Bomo_Chr13(+):6586903-6592244      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.161 Mitochondrial   Reliability : 1.778

CDS

ATGGCTGCGATAGCACTAAAAACTCAAGCTACTAGCAAATTACTTCATTTGAATGGGTCTATGAGTGTTGTGTACATCAAAGCCGCTAACTACAGTTCGGATCGTAAACCCAACCTTGCAGCATATAAGCGAGGTACTGGTGGCCGCAGTAGCTTTAACGGCATCGTAGCCACAGTTTTCGGTTGCACCGGATTTGTCGGACGCTATGTGTGCAACAAATTGGGAAAAATTGGTACCCAGTTAATTTTACCATACAGAGGCGATTTCTATGATGCCCAAAGGTTGAAAGTGTGCGGAGATTTAGGCCAGGTCCTGTTTACTCCTTACCATCTCCTTGATGAGGAGTCTATTGCAAAAGCGGTCCGATACTCTAATGTTGTCATCAATCTAGTTGGACGAGATTATGAAACTAAGAATTTCAAATACAATGATGTTCACGTTGATGGTGTAAGAAGAATTGCCAGAATCTGCAGAGAAGAAGGAGTTGAGAGATTCATTCATCTGTCTTATTTAAATGCTGAAGAACATCCGAAACCTCTTGTCCTGAAGAAACCGTCTGCTTGGAAAATAAGCAAGTATTTGGGAGAGTGTGCAGTCAGAGAGGAATACCCAACTGCCACTATTATCCGAGCATCAGACATCTATGGTTCCGAAGACAGATTTTTGAGGTCATTAGTTAATAAGATGCGATCTCACAGCAACCTGATGCCCCTCTATAAAAACGGATTAGCGACTGTGAAACAGCCTGTGTTTGTGTCGGACGTCGCTCAGGGTATCGTGAACGCCGCGCGCGACGACGACACTAAATGTGAAGTCTACCAAGCCGTTGGGCCAAAACGCTACTTACTTGCCGATTTGGTTGATTGGTTTTACAAACTAATGAGGAAGGACGAAAAATGGGGTGGATACATTCGCTACGACATGAAGTACGACCCGATACTGCCCCTGAAAGTTGCTTTGGTTAATGCCATTTCACCAGCTTATCCACTCGGAAATCTTCACTGGGAAGGAATTGAAAGGGAAGCTACTTCAGATAATGTGGTGATCGGCGTGCCCACCCTTGAGGATTTGGGCGTCACCTTGACGCACATGGAAGACCAGGTTCCGTGGGAACTGAAACCTTTTCGCGCCCATCAGTACTACATGGATCGGCTTGGAGAGTTCCCGAAACCAGACCCTCCACCAGTTTACTCAGCTTGA

Protein

MAAIALKTQATSKLLHLNGSMSVVYIKAANYSSDRKPNLAAYKRGTGGRSSFNGIVATVFGCTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVRRIARICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDIYGSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPVFVSDVAQGIVNAARDDDTKCEVYQAVGPKRYLLADLVDWFYKLMRKDEKWGGYIRYDMKYDPILPLKVALVNAISPAYPLGNLHWEGIEREATSDNVVIGVPTLEDLGVTLTHMEDQVPWELKPFRAHQYYMDRLGEFPKPDPPPVYSA

Uniprot

H9IUG7   A0A194RGX8   I4DK06   S4PL76   A0A2A4JI70   A0A212FI25   + More
A0A2H1V6Y3   A0A0L0BMX8   A0A2J7QIX5   I4DRB5   A0A1I8P848   A0A1L8EE22   U5EV20   A0A0K8TTJ5   A0A182IKN8   A0A1Q3FI43   A0A067RSM5   A0A1I8MLV6   B0X750   A0A336L840   A0A2M4BQH8   T1PFJ6   A0A182JQU4   A0A2M3Z2L7   A0A2M4BQD4   A0A1L8E0I7   A0A2P8ZAT2   T1E7B9   A0A182X0H8   A0A182UXZ9   A0A182KV97   A0A182TUB9   A0A182I5R7   A0A2M4A972   A0A182YIX4   A0A1L8E0F2   W5JDN0   A0A182W9J6   Q7Q229   A0A1L8E0R4   A0A182REI7   W8B7U2   A0A182P1X3   A0A182FVV8   A0A0A1WQM3   A0A182QNV9   A0A182M0S8   B4LGC0   B4KY50   A0A084VB40   A0A023ERK2   Q16VZ4   A0A023EQE5   A0A034VW24   A0A182NV78   A0A1A9UM39   A0A1Y1KG50   A0A1A9WH60   D3TQE0   A0A1B0G2S6   A0A1A9ZDK7   B4N6L5   A0A1A9YLS9   A0A1B0C3X0   B3M9B1   B4IYY9   B4IUH0   A0A1B0AFU1   B3NIN3   Q29DC3   A0A024E3A5   B4PET2   B4IAC1   A0A1W4W6S1   A0A0J9RYS1   D2A3E2   B4H7N4   Q9VPE2   A0A0M4EC20   A0A3B0JVT2   A0A1B0G1G5   A0A1J1HX26   V5GWM3   A0A0P6DC76   A0A0P5G5L8   A0A1B6DM59   A0A0P5KYJ3   A0A0P5TSG6   A0A0P5F4A9   A0A0P5NYG7   A0A0P5N7K0   A0A0P5Y9R2   A0A0P5ARE0   A0A0P5J9Q0   A0A0P5AKQ8   A0A0P5HPJ5   A0A0P6FL69   A0A0P5WRD9   A0A1B0DP10   A0A0P6FYH9  

Pubmed

19121390    26354079    22651552    23622113    22118469    26108605    + More
26369729    24845553    25315136    29403074    20966253    25244985    20920257    23761445    12364791    24495485    25830018    17994087    24438588    24945155    26483478    17510324    25348373    28004739    20353571    17550304    15632085    22936249    18362917    19820115    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356   

EMBL

BABH01001043    KQ460205    KPJ16842.1    AK401624    KQ459606    BAM18246.1    + More
KPI91213.1    GAIX01004195    JAA88365.1    NWSH01001481    PCG71123.1    AGBW02008449    OWR53359.1    ODYU01000982    SOQ36559.1    JRES01001711    KNC20629.1    NEVH01013570    PNF28532.1    AK405052    BAM20455.1    GFDG01001905    JAV16894.1    GANO01002068    JAB57803.1    GDAI01000127    JAI17476.1    GFDL01007809    JAV27236.1    KK852444    KDR23820.1    DS232438    EDS41744.1    UFQS01000218    UFQS01001264    UFQT01000218    UFQT01001264    SSX01495.1    SSX10035.1    SSX21875.1    GGFJ01006040    MBW55181.1    KA647449    AFP62078.1    GGFM01001937    MBW22688.1    GGFJ01006042    MBW55183.1    GFDF01001831    JAV12253.1    PYGN01000121    PSN53607.1    GAMD01003182    JAA98408.1    APCN01003489    GGFK01003847    MBW37168.1    GFDF01001876    JAV12208.1    ADMH02001521    ETN62206.1    AAAB01008979    EAA13714.3    GFDF01001830    JAV12254.1    GAMC01013447    JAB93108.1    GBXI01013120    JAD01172.1    AXCN02001805    AXCM01001817    CH940647    EDW70449.1    CH933809    EDW18752.1    ATLV01005273    KE524276    KFB35184.1    JXUM01157484    JXUM01157485    JXUM01157486    GAPW01001790    KQ572762    JAC11808.1    KXJ68000.1    CH477579    EAT38719.1    JXUM01070465    JXUM01070466    GAPW01001791    KQ562608    JAC11807.1    KXJ75488.1    GAKP01012897    JAC46055.1    GEZM01087931    JAV58386.1    EZ423642    ADD19918.1    CCAG010015567    CH964161    EDW80004.1    JXJN01025135    CH902618    EDV40095.1    CH916366    EDV97697.1    CH891906    EDX00034.1    CH954178    EDV52529.1    CH379070    EAL30491.1    BT150449    AHZ64223.1    CM000159    EDW95156.1    CH480826    EDW44234.1    CM002912    KMZ00812.1    KQ971338    EFA02874.1    CH479219    EDW34674.1    AE014296    BT150453    AAF51613.1    AGB94809.1    AIG12978.1    CP012525    ALC45116.1    OUUW01000002    SPP76841.1    CCAG010012985    CVRI01000033    CRK92632.1    GALX01003813    JAB64653.1    GDIQ01082806    JAN11931.1    GDIP01254837    GDIP01200297    GDIQ01267820    GDIP01100499    GDIP01045524    GDIQ01053580    LRGB01001579    JAI68564.1    JAJ83904.1    KZS11557.1    GEDC01010566    JAS26732.1    GDIQ01185621    JAK66104.1    GDIP01122205    JAL81509.1    GDIQ01265926    JAJ85798.1    GDIQ01157374    JAK94351.1    GDIQ01157375    JAK94350.1    GDIP01060858    JAM42857.1    GDIP01195046    JAJ28356.1    GDIQ01267083    GDIQ01203265    JAK48460.1    GDIP01211342    GDIP01147051    JAJ12060.1    GDIQ01247705    JAK04020.1    GDIQ01045877    JAN48860.1    GDIP01082698    JAM21017.1    AJVK01017960    GDIQ01043771    JAN50966.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000218220    UP000007151    UP000037069    + More
UP000235965    UP000095300    UP000075880    UP000027135    UP000095301    UP000002320    UP000075881    UP000245037    UP000076407    UP000075903    UP000075882    UP000075902    UP000075840    UP000076408    UP000000673    UP000075920    UP000007062    UP000075900    UP000075885    UP000069272    UP000075886    UP000075883    UP000008792    UP000009192    UP000030765    UP000069940    UP000249989    UP000008820    UP000075884    UP000078200    UP000091820    UP000092444    UP000092445    UP000007798    UP000092443    UP000092460    UP000007801    UP000001070    UP000002282    UP000008711    UP000001819    UP000001292    UP000192221    UP000007266    UP000008744    UP000000803    UP000092553    UP000268350    UP000183832    UP000076858    UP000092462   

PRIDE

H9IUG7    Q9VPE2   

Pfam

PF01370   Epimerase

Interpro

IPR001509   Epimerase_deHydtase        + More
IPR036291   NAD(P)-bd_dom_sf       
IPR001810   F-box_dom       
IPR036047   F-box-like_dom_sf       
IPR032675   LRR_dom_sf       

SUPFAM

SSF51735   SSF51735        + More
SSF81383   SSF81383       

Gene 3D

3.80.10.10    

ProteinModelPortal

H9IUG7   A0A194RGX8   I4DK06   S4PL76   A0A2A4JI70   A0A212FI25   + More
A0A2H1V6Y3   A0A0L0BMX8   A0A2J7QIX5   I4DRB5   A0A1I8P848   A0A1L8EE22   U5EV20   A0A0K8TTJ5   A0A182IKN8   A0A1Q3FI43   A0A067RSM5   A0A1I8MLV6   B0X750   A0A336L840   A0A2M4BQH8   T1PFJ6   A0A182JQU4   A0A2M3Z2L7   A0A2M4BQD4   A0A1L8E0I7   A0A2P8ZAT2   T1E7B9   A0A182X0H8   A0A182UXZ9   A0A182KV97   A0A182TUB9   A0A182I5R7   A0A2M4A972   A0A182YIX4   A0A1L8E0F2   W5JDN0   A0A182W9J6   Q7Q229   A0A1L8E0R4   A0A182REI7   W8B7U2   A0A182P1X3   A0A182FVV8   A0A0A1WQM3   A0A182QNV9   A0A182M0S8   B4LGC0   B4KY50   A0A084VB40   A0A023ERK2   Q16VZ4   A0A023EQE5   A0A034VW24   A0A182NV78   A0A1A9UM39   A0A1Y1KG50   A0A1A9WH60   D3TQE0   A0A1B0G2S6   A0A1A9ZDK7   B4N6L5   A0A1A9YLS9   A0A1B0C3X0   B3M9B1   B4IYY9   B4IUH0   A0A1B0AFU1   B3NIN3   Q29DC3   A0A024E3A5   B4PET2   B4IAC1   A0A1W4W6S1   A0A0J9RYS1   D2A3E2   B4H7N4   Q9VPE2   A0A0M4EC20   A0A3B0JVT2   A0A1B0G1G5   A0A1J1HX26   V5GWM3   A0A0P6DC76   A0A0P5G5L8   A0A1B6DM59   A0A0P5KYJ3   A0A0P5TSG6   A0A0P5F4A9   A0A0P5NYG7   A0A0P5N7K0   A0A0P5Y9R2   A0A0P5ARE0   A0A0P5J9Q0   A0A0P5AKQ8   A0A0P5HPJ5   A0A0P6FL69   A0A0P5WRD9   A0A1B0DP10   A0A0P6FYH9  

PDB

5LNK     E-value=2.73355e-68,     Score=657

KEGG

101738045    K03953 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9 | (RefSeq) NADH dehydrogenase [u

PATHWAY

00190    Oxidative phosphorylation - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0003824   GO:0050662   GO:0003954   GO:1901006   GO:0005747   GO:0006120   GO:0016021   GO:0004890   GO:0005216   GO:0006811   GO:0022891   GO:0003707   GO:0051537  

Length:

399

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

10.39847

Exp number, first 60 AAs:

5.58534

Total prob of N-in:

0.49106

outside

1  -  399

 

 

Pi

200.417525

Theta

169.44916

Tajima's D

0.446918

CLR

0.006042

CSRT

0.500474976251187

Interpretation

Uncertain