Gene

KWMTBOMO07769

Pre Gene Modal

BGIBMGA001245

Annotation

PREDICTED:_spondin-1-like_[Papilio_xuthus]

Location

Bomo_Chr13(-):6554108-6567732      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.98

CDS

ATGCACGAGACGGAAGCGTTGAGGTTTTTATTGGTCTTGGTAGTTTCTTTTGAGAATGCGATATTTGTTGCTGGTGAGTCCTTGGCTAAGTGTGAACAGGCTCCGGCGCACGCGCAGCCCACCGATGATCATTTCAGCTTGCGTATATCGGGCGAACCAGATTTGTTTATACCAGGAGAGCTGTATACCGTTACGCTCCGAGGGGCTAACAGCGGTCAAGGCCCCTATCCGTTTACCGGCTTCAAGATATGGGCTGAAGTCGCGAGTGATTTTTCAAAAGACGAAACAGAGCAAGGAGACCTGAGAGCAACAGCTGACCCTCACCAGCCGCTGGGAGTATTCCAGGCTTACGATGCTCAGACTAAACTTCATGAATCCTGTGCTCCAGCCGTCGATAATGCTACTGCCCACCCTAAGACAGAAGTGCAGGTAATATGGAATGCACCTTTAAGTGTGAGAGGAGTTTGCGTGCGGCTGTCTGCTCGTGTCGGTCCCACGCTGACTGCAAATAAATGGTCTGTTTTGGCTCGTAAGATCTGCCCCACTTCGGCTGGACCTTCTAGCCTGAATCGACAACCACCCATTGTTGAGCCCTGCTGTGCTTGTGATGAAGCAAAATATGAGGTAAATTTCGAAGGAATGTGGTCTCGCAACACCCATCCTCGTGAGTTTCCTCCGGAGAATGCTCATGCCCATTTTGGTGATATAATTGGCGCCTCACATACTGCACAGTACAGGGTCTGGCAAGAAGGTCGGGTAGCGACGACTGGTTTAAGGCGTCTCGCCGATGACGGCTCTACCACAGCCCTCGAAAAAGAATTAAAAGCAGAGAGTGATCATATCCGTACGATAATCAAAGCCCGTGGTATATCGTGGCAGCAAGTGACGGGAACTGGCATTCCAAGTACGTTTGCTGTGTTTCGTGTAGACGCCAAGCACCATCTGGTATCTTTGGCTGCCAAATTAGCTCCTTCGCCAGACTGGATCGTAGGAGTTTCGGCGTTGGAGCTCTGCAACGTGAATTGTACATGGAGAACGTCGGCCTCACTGTCGTTGTACCCTTACGATGCTGGTACAGATAATGGCATAAGTTATACTTCTCGCCGTATGCCAACGATTCCAGCGGCGCCCGTACGAGCCCTTAGGACGGATTGGCCTCGCGATGTGCGCTCACCGTTTTTCAGCACGACCGGGGAAATGAGACCCTTTGCGCGCGTTCGATTAACCAGATTGCGTTTATATGAGAAGAGCTGTGATGTCACAGAGCCCGGAACGGATCAGAACGTTCAAGAAGGTGTCGGTGCGGGAGGCTGGTGCGCGACACACGGGTGGGGTCCGTGGGGTCCGTGCAGCGTGACGTGCGGTGCGGGCCGCGCCTCCCGCCAGCGCGACTACGTCTGGCCGGCGCGGGCCCACGCTGAGGCTTGTCGCGTACAACTCACAGATTACAAACACTGCCACGGACCGAGGATGCATTGCCGAGCTGTATCGGAATACGAGCCGGACCCAGCGGAGTCGAGCGGCCCGTGTGCGATGTCTCCGTGGTCGGAGTGGTCCCCGTGCGACGGGTGCGGGGTGCGGGCCCGCACGCGGCACTACCTCGCCCCGCGAGCGTACAAACGATGTCACATCGGCTTCCGCGCCCGCACTATACTCAGCCAGGCCATGCCCTGCGCCGAGGGACCGTGTGAACAACCACCGCCCCGATACGCGAACATGTCGAGTTTCGATTGGTTTTTCGTGGACAATCCTAGAGGAGAGTGTAGAGTGACGTCATGGAGCGACTGGTCGCCGTGCTCGGCGCGGTGCGGGCGCGGCCGCCGACTGCGCACGCGCGTGTACGTAGTGCGGGAGACGCGCGTGCAACAGCTCATGTCGAAACGATTGCTGGCTCAGTGGAATCAACGTTTTGCCGAATTGCAGAACTTGGAAGTTGCTACAGAAAACGTAACCTCAGAGGACCCAGAAATTGAAAATCTCGTAGAGGAACATCTGGAACGATGCCAGTTCACTTTGACTCAACAAGAGGCCTTTTGCGACGGAGAAGACAGAAGCTGCATCAATTTTAATGACTCTTCAAAAATCTGCAAGCTACCGATGTCGGTCGGCCATTGTCGCAGGTATCAGGAGCGTTGGTTCTTTGACTGGCCCCGCAAGTCCTGTGAACCGTTCGGATACTCCGGCTGCGGAGGGAACGACAATAATTTCCGTGACAGAGATGAGTGTTTGAGCGTATGTCACAAGAACACCTCGGTAGGAAAGAAATCGGAATCTGTGAGCGAAACGAGAATTAAAAAAATGAAGGCGACCCCTTCATCTGATGACAACGAGGTCATGTTGAATGACAAGCCAACGGTGCGCGATTCAATGAAGTGTGCAACTGATTAG

Protein

MHETEALRFLLVLVVSFENAIFVAGESLAKCEQAPAHAQPTDDHFSLRISGEPDLFIPGELYTVTLRGANSGQGPYPFTGFKIWAEVASDFSKDETEQGDLRATADPHQPLGVFQAYDAQTKLHESCAPAVDNATAHPKTEVQVIWNAPLSVRGVCVRLSARVGPTLTANKWSVLARKICPTSAGPSSLNRQPPIVEPCCACDEAKYEVNFEGMWSRNTHPREFPPENAHAHFGDIIGASHTAQYRVWQEGRVATTGLRRLADDGSTTALEKELKAESDHIRTIIKARGISWQQVTGTGIPSTFAVFRVDAKHHLVSLAAKLAPSPDWIVGVSALELCNVNCTWRTSASLSLYPYDAGTDNGISYTSRRMPTIPAAPVRALRTDWPRDVRSPFFSTTGEMRPFARVRLTRLRLYEKSCDVTEPGTDQNVQEGVGAGGWCATHGWGPWGPCSVTCGAGRASRQRDYVWPARAHAEACRVQLTDYKHCHGPRMHCRAVSEYEPDPAESSGPCAMSPWSEWSPCDGCGVRARTRHYLAPRAYKRCHIGFRARTILSQAMPCAEGPCEQPPPRYANMSSFDWFFVDNPRGECRVTSWSDWSPCSARCGRGRRLRTRVYVVRETRVQQLMSKRLLAQWNQRFAELQNLEVATENVTSEDPEIENLVEEHLERCQFTLTQQEAFCDGEDRSCINFNDSSKICKLPMSVGHCRRYQERWFFDWPRKSCEPFGYSGCGGNDNNFRDRDECLSVCHKNTSVGKKSESVSETRIKKMKATPSSDDNEVMLNDKPTVRDSMKCATD

Uniprot

A0A2A4JGL1   A0A2H1V6W0   A0A3S2TK83   A0A194PD14   A0A194RR62   E0VCJ0   + More
A0A2J7PR62   U5EYT8   A0A2J7PR47   A0A2J7PR48   A0A2J7PR63   A0A1Q3FPJ2   A0A1Q3FP78   A0A182R5C7   A0A1Q3FPU6   Q170L4   A0A2M4CJ21   A0A182UWY8   A0A182TS53   A0A182XNC5   A0A182JZY3   A0A182KSL1   A0A182PBS9   A0A182MYL4   A0A182QL14   A0A336LL51   A0A182HQ46   A0A182FU59   A0A182W944   A0A182M9X5   A0A182Y1R5   A0A0K8STY7   A0A0P5PPB9   A0A182JBS3   A0A0A9Z7L3   A0A0P5G5S6   A0A1L8E3B7   A0A1L8E3B6   A0A0P5H4F8   A0A0P5CIT8   T1JBH1   Q7Q082   A0A0P5Z9I4   A0A0N8CXC5   A0A0P5SZF3   A0A0P4ZG86   A0A0P5IU67   A0A0P6CTJ0   A0A0N8CEJ0   A0A0P5QQF6   A0A0P5WQD1   A0A0N8ARA9   A0A1B0EWS7   A0A0P5TWQ4   A0A0N8AJJ8   A0A0P6I4P9   A0A0P5SCA1   A0A0P6GS18   A0A0P5MPN1   A0A0N8BMI8   A0A0P5S9E5   A0A0P5E4B7   A0A0P5UAZ6   A0A0P6DCY0   A0A0P5EMH8   A0A0N8BPV7   A0A0P5XD67   B0WNK9   A0A0P6EAL7   A0A0P5EU30   A0A0P5KVB3   A0A0P5MWG3   A0A0P5KSU2   A0A0P6FLY3   A0A023F2I8   A0A084WHT0   A0A0P5K323   A0A0P5T3I4   A0A0N8D582   A0A0P6FNM0   T1K1N8   A0A0P5UGB3   A0A067RIU1   A0A182T7Y8   A0A0P6G7S6   A0A0P5A418   A0A0P5TFB0   A0A0P5AL01   A0A0P5EHT2   W5J1Y7   A0A0P5ULQ1   A0A2M4AIB3   A0A224XEU1   A0A2M4BE31   A0A182GYU9   A0A0P5I8X5   A0A0P5R1Y0   E2BUL2  

Pubmed

26354079    20566863    17510324    20966253    25244985    25401762    + More
26823975    12364791    25474469    24438588    24845553    20920257    23761445    26483478    20798317   

EMBL

NWSH01001481    PCG71121.1    ODYU01000982    SOQ36561.1    RSAL01000084    RVE48406.1    + More
KQ459606    KPI91211.1    KQ459700    KPJ20368.1    DS235053    EEB11096.1    NEVH01022633    PNF18806.1    GANO01000077    JAB59794.1    PNF18807.1    PNF18808.1    PNF18809.1    GFDL01005525    JAV29520.1    GFDL01005644    JAV29401.1    GFDL01005537    JAV29508.1    CH477472    EAT40381.1    GGFL01000700    MBW64878.1    AXCN02001040    UFQT01000038    SSX18435.1    APCN01003292    AXCM01008352    GBRD01009167    JAG56654.1    GDIQ01125376    JAL26350.1    GBHO01005824    GDHC01010700    JAG37780.1    JAQ07929.1    GDIQ01267746    JAJ83978.1    GFDF01000867    JAV13217.1    GFDF01000866    JAV13218.1    GDIQ01233233    GDIQ01119073    GDIP01095690    JAK18492.1    JAM08025.1    GDIP01185568    JAJ37834.1    JH432010    AAAB01008986    EAA00346.3    GDIP01046852    JAM56863.1    GDIP01089647    JAM14068.1    GDIP01134289    JAL69425.1    GDIP01213072    JAJ10330.1    GDIQ01210190    JAK41535.1    GDIQ01087539    JAN07198.1    GDIP01139527    JAL64187.1    GDIQ01113789    JAL37937.1    GDIP01095689    JAM08026.1    GDIQ01250587    GDIQ01233232    GDIQ01163152    GDIQ01132337    JAK01138.1    AJWK01006547    AJWK01006548    AJWK01006549    GDIP01138432    JAL65282.1    GDIQ01269475    JAJ82249.1    GDIQ01009616    JAN85121.1    GDIP01141635    JAL62079.1    GDIQ01029118    JAN65619.1    GDIQ01156604    JAK95121.1    GDIQ01265527    GDIQ01233231    GDIQ01203000    GDIQ01188747    GDIQ01163155    GDIQ01160359    GDIQ01119072    JAK88570.1    GDIP01142732    JAL60982.1    GDIP01147227    JAJ76175.1    GDIP01132845    JAL70869.1    GDIQ01079590    GDIQ01048851    JAN15147.1    GDIQ01267301    JAJ84423.1    GDIQ01156603    JAK95122.1    GDIP01073851    JAM29864.1    DS232012    EDS31836.1    GDIQ01065551    JAN29186.1    GDIQ01267300    GDIQ01197652    JAJ84424.1    GDIQ01180097    JAK71628.1    GDIQ01158613    JAK93112.1    GDIQ01180096    JAK71629.1    GDIQ01045511    JAN49226.1    GBBI01003473    JAC15239.1    ATLV01023878    KE525347    KFB49774.1    GDIQ01215998    GDIQ01112476    JAK35727.1    GDIP01131532    JAL72182.1    GDIP01067591    JAM36124.1    GDIQ01045510    JAN49227.1    CAEY01001353    GDIP01113440    JAL90274.1    KK852606    KDR20370.1    GDIQ01037345    JAN57392.1    GDIP01208772    JAJ14630.1    GDIP01127234    JAL76480.1    GDIP01197830    JAJ25572.1    GDIQ01270118    JAJ81606.1    ADMH02002215    ETN57751.1    GDIP01128621    JAL75093.1    GGFK01007202    MBW40523.1    GFTR01008128    JAW08298.1    GGFJ01002112    MBW51253.1    JXUM01098242    KQ564405    KXJ72335.1    GDIQ01217146    JAK34579.1    GDIQ01108980    JAL42746.1    GL450721    EFN80621.1   

Proteomes

UP000218220    UP000283053    UP000053268    UP000053240    UP000009046    UP000235965    + More
UP000075900    UP000008820    UP000075903    UP000075902    UP000076407    UP000075881    UP000075882    UP000075885    UP000075884    UP000075886    UP000075840    UP000069272    UP000075920    UP000075883    UP000076408    UP000075880    UP000007062    UP000092461    UP000002320    UP000030765    UP000015104    UP000027135    UP000075901    UP000000673    UP000069940    UP000249989    UP000008237   

Pfam

PF00090   TSP_1        + More
PF06468   Spond_N
PF02014   Reeler
PF00014   Kunitz_BPTI
PF02582   DUF155

Interpro

IPR038678   Spondin_N_sf        + More
IPR002223   Kunitz_BPTI       
IPR042307   Reeler_sf       
IPR002861   Reeler_dom       
IPR036383   TSP1_rpt_sf       
IPR036880   Kunitz_BPTI_sf       
IPR020901   Prtase_inh_Kunz-CS       
IPR000884   TSP1_rpt       
IPR009465   Spondin_N       
IPR003734   DUF155       

SUPFAM

SSF57362   SSF57362        + More
SSF82895   SSF82895       

Gene 3D

2.20.100.10     2.60.40.2130     2.60.40.4060     4.10.410.10    

CDD

cd08544  Reeler
cd00109  KU

ProteinModelPortal

A0A2A4JGL1   A0A2H1V6W0   A0A3S2TK83   A0A194PD14   A0A194RR62   E0VCJ0   + More
A0A2J7PR62   U5EYT8   A0A2J7PR47   A0A2J7PR48   A0A2J7PR63   A0A1Q3FPJ2   A0A1Q3FP78   A0A182R5C7   A0A1Q3FPU6   Q170L4   A0A2M4CJ21   A0A182UWY8   A0A182TS53   A0A182XNC5   A0A182JZY3   A0A182KSL1   A0A182PBS9   A0A182MYL4   A0A182QL14   A0A336LL51   A0A182HQ46   A0A182FU59   A0A182W944   A0A182M9X5   A0A182Y1R5   A0A0K8STY7   A0A0P5PPB9   A0A182JBS3   A0A0A9Z7L3   A0A0P5G5S6   A0A1L8E3B7   A0A1L8E3B6   A0A0P5H4F8   A0A0P5CIT8   T1JBH1   Q7Q082   A0A0P5Z9I4   A0A0N8CXC5   A0A0P5SZF3   A0A0P4ZG86   A0A0P5IU67   A0A0P6CTJ0   A0A0N8CEJ0   A0A0P5QQF6   A0A0P5WQD1   A0A0N8ARA9   A0A1B0EWS7   A0A0P5TWQ4   A0A0N8AJJ8   A0A0P6I4P9   A0A0P5SCA1   A0A0P6GS18   A0A0P5MPN1   A0A0N8BMI8   A0A0P5S9E5   A0A0P5E4B7   A0A0P5UAZ6   A0A0P6DCY0   A0A0P5EMH8   A0A0N8BPV7   A0A0P5XD67   B0WNK9   A0A0P6EAL7   A0A0P5EU30   A0A0P5KVB3   A0A0P5MWG3   A0A0P5KSU2   A0A0P6FLY3   A0A023F2I8   A0A084WHT0   A0A0P5K323   A0A0P5T3I4   A0A0N8D582   A0A0P6FNM0   T1K1N8   A0A0P5UGB3   A0A067RIU1   A0A182T7Y8   A0A0P6G7S6   A0A0P5A418   A0A0P5TFB0   A0A0P5AL01   A0A0P5EHT2   W5J1Y7   A0A0P5ULQ1   A0A2M4AIB3   A0A224XEU1   A0A2M4BE31   A0A182GYU9   A0A0P5I8X5   A0A0P5R1Y0   E2BUL2  

PDB

3Q13     E-value=1.92889e-38,     Score=403

KEGG

101738853    no KO assigned | (RefSeq) spondin-1-like

GO

GO:0004867   GO:0004064   GO:0016021   GO:0031012   GO:0007155   GO:0008324   GO:0004890   GO:0005216   GO:0006811   GO:0022891   GO:0003707   GO:0051537  

SignalP

Position:   1 - 25,         Likelihood:  0.592879

 

 

Length:

795

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.72416

Exp number, first 60 AAs:

2.72375

Total prob of N-in:

0.13165

outside

1  -  795

 

 

Pi

215.195058

Theta

177.021515

Tajima's D

0.85202

CLR

0.315081

CSRT

0.619169041547923

Interpretation

Uncertain