SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07767
Pre Gene Modal
BGIBMGA001247
Annotation
PREDICTED:_cingulin-like_isoform_X1_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.292
 

Sequence

CDS
ATGGTTGCCGGGATTGCTGAAAATTTAAAAGCTAAAATTAACTTTTCTCTGGAAATAGCCAAAATACCGTGGTTGGATCGCGACACTATGATAAAGAAAATAGAACGATTGCAAAAAGAAAATTCAATACTTCAACACAAGGTTGATGAAACTTCTAAAAAAGAAAACGAAGAACCGCCTTGTCATCCAGTCCAGTCTGGTTCCTATAATTATCAGGTACTGAACGAGGAACTGTCAAAAGAGCGAGCGGCGCGCGAAGCACTGAAGGAGGTAGTGGCATCAGCGGAGAGCATGCTGCGTGTAGCGCGCGCCCGCATCGCGACCTTGGAGAGGCAGCTCAAAGATACCAAGGCTGAATTCGAAATCGCCAAGAAGAAGCACAAAGACCTCGAGCAACTCTATCGTCATCGCGAGAACAGTTACGATGCCAGATCAAAAAAGCTCCTCGAAGTCTCAAAAACCGGCGAAATTACAATAGAGACTTTGTCGCGACAGCGAGATGCCCTTGAGCTTAGGGTTAAAGAACTACGCGAGCAAGCAGAAACGGCGGAACAAGTCGCACAGTCACGTGTGTCAGAACAGAAGGCTCGCACCGAGTTCCTTCAGGCGAAGGTAGCAGAACAGGAGAAGAGTAAAGCAGTAGCCGAGTCCAAGGTTGTTGAACTTGAAGGGAAAGTGAAAGAGTTGGAAAGTCAGTTACAATCTTTTCGTGATCGATCGATCAGACTAGTGGATATGGAGCGTCGGCGTTGCCTGGAGTACGTTCCGTGTAAAGAAAACGAACCTACGGACAGAGAGACTGAAATTTGGAAAGAGCTGCAAATGACTCGAGGAGCGTTGCTTCGGTCTGAAGAGGAGTTACGTCAGAGTCGCGCCGAGAAAGATAGTTTTTTGAATTCACTGTCCAGAATAGCGCAAGGCGAAGGAACTGAGAGTTTTCAAGATAAAATGGCGACAGAGTTGCTTGATCGAGAACAAAAGATTGTTAAGCTGCAGCAAACTATTGATGAGCAACGAGAAAATGAGAAATCAATGGAGCAGACTATGACACAATATGAAAATCAACTGGCAGCTTTACGTCTTGAAGTGAAACGATTGAGAAATTATGACTGTTACTCTAAAGACGTATCATATCCGGAATTACAAACAGAGATATTGGATTTACATTTGCAAGTCGAAACGTTATCTAGAGAGAGGACAGCGTTAATTACTGCTGCAGCTTCTCGAGCATTGATGCTTGAACGTCATGAGAGAGCTGCTGATCTATTCGCTCGCATGGTGCGGGCGCGGAAAGATCTCGCCGCATTACTGGACGGACGAATAGACCCACCGCCCTTCGAAGATATCGCACACGCAGAGATGTCCCGATCGTTGACGTCCGTATGTGCAACAGCGGCAGACACGTGGACAGCTTTACGGGCTGAGAGAGCTCGGGTACTAAGACTAGAGAGTGCGGTACTTGCTCAAAGTTTGCAGTTGGAGAGAGAAGGGCTTGTTCGGACGCAGCTTGAGCGACGCAAGGCTATACTCGAAAGAGAATTATTACGAGCGAACCATTCCACATCGGCAAATTCTGTTGTGATGATTCAGATTTTTTTGGAAATAAGCAAAGGAAGTACTAGTGAAACAAGTGTTTATAAAGGAAGTACTAGTGAAACAGGTGTTTATTGTACAAGCCACATTTAA
Protein
MVAGIAENLKAKINFSLEIAKIPWLDRDTMIKKIERLQKENSILQHKVDETSKKENEEPPCHPVQSGSYNYQVLNEELSKERAAREALKEVVASAESMLRVARARIATLERQLKDTKAEFEIAKKKHKDLEQLYRHRENSYDARSKKLLEVSKTGEITIETLSRQRDALELRVKELREQAETAEQVAQSRVSEQKARTEFLQAKVAEQEKSKAVAESKVVELEGKVKELESQLQSFRDRSIRLVDMERRRCLEYVPCKENEPTDRETEIWKELQMTRGALLRSEEELRQSRAEKDSFLNSLSRIAQGEGTESFQDKMATELLDREQKIVKLQQTIDEQRENEKSMEQTMTQYENQLAALRLEVKRLRNYDCYSKDVSYPELQTEILDLHLQVETLSRERTALITAAASRALMLERHERAADLFARMVRARKDLAALLDGRIDPPPFEDIAHAEMSRSLTSVCATAADTWTALRAERARVLRLESAVLAQSLQLEREGLVRTQLERRKAILERELLRANHSTSANSVVMIQIFLEISKGSTSETSVYKGSTSETGVYCTSHI

Summary

Ontologies

Topology

Length:
561
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00092
Exp number, first 60 AAs:
0.00013
Total prob of N-in:
0.00084
outside
1  -  561
 
 

Population Genetic Test Statistics

Pi
225.206714
Theta
183.251542
Tajima's D
0.752193
CLR
0
CSRT
0.586670666466677
Interpretation
Uncertain
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