Silkworm Genome Informatics Database

Gene

KWMTBOMO07763 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001249

Annotation

PREDICTED:_coiled-coil_domain-containing_protein_94_[Amyelois_transitella]

Location

Bomo_Chr13(-):6484535-6490252 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.317

CDS

ATGTCGGAACGAAAGGTTTTAAATAAATATTATCCACCGGATTTCGATCCTTCGAAGATACCTCGTATGAAACTAGCGAAAAATCGTCAATACACAGTCCGACTTATGGCTCCATTTAACATGCGATGTGCTACATGCGGTGAATATATTTATAAAGGCAAAAAGTTCAATGCTAGGAAAGAGGATGTGGAGAATGAAGATTACCTCGGTATTAGGATATATAGGTTCTATATAAAATGTACTCGTTGCTTGCAAGAAATATCATTCAAAACAGATCCAAAGAATACCGATTATGAGATAGAAGCTGGTGCTACAAGGAACTTTATGGCATTAAAACTTGCTGAAGAACAGGCCAAGCGTGAAGAAGAAGAGCAAAAAGAAGAAGAAGCCAATAATCCTATGAAGCTATTAGAATACAGAACGGAGCAATCACGACAAGAAATTGAACAATTGGAAAACCTTGAGGAATTAAAGGAATTAAACCGTAGACAGCAAGCAGTAGACTATGAGGGTATGTTAAGACAGTATCAACCAGAAACAGTTGAAGAAAGAAAGGCAAGAGAAGAGAAAGAAGATAATGATTTTATAAAGTCAGTGAAATTCAACAATTGCTCTAAGAAAGTGGTTGCCGAAGAAATAATCGAAGATGTTATAGATGAAGATGAACCACCATCAAAATGTTCTAGAATTGAAAGCTTAACACAAAAAACTTCGGATAAGTCAGATAGTATAAAAAAACATTCTTGGAATAGGAGTGTCGGTGGATTAATAACGAAACCGGCTCTCGCGAACCTCGTGAGGAGTAAAAAACCAGAAAGTGCTGAAACGTCTAAGTTCACTACAGAAGCACTTTCAAAGAGTAATAATGCTGCTGAAAGTAATACGAAAAGCACAAAAGATAAACCAGCGTCAGGGCTCTCATTATTAGCTGGGTATTCGAGCAGTGACAGTTCAGATTCATAG

Protein

MSERKVLNKYYPPDFDPSKIPRMKLAKNRQYTVRLMAPFNMRCATCGEYIYKGKKFNARKEDVENEDYLGIRIYRFYIKCTRCLQEISFKTDPKNTDYEIEAGATRNFMALKLAEEQAKREEEEQKEEEANNPMKLLEYRTEQSRQEIEQLENLEELKELNRRQQAVDYEGMLRQYQPETVEERKAREEKEDNDFIKSVKFNNCSKKVVAEEIIEDVIDEDEPPSKCSRIESLTQKTSDKSDSIKKHSWNRSVGGLITKPALANLVRSKKPESAETSKFTTEALSKSNNAAESNTKSTKDKPASGLSLLAGYSSSDSSDS

Uniprot

H9IVG9 A0A1E1WQD6 A0A2W1BPX0 A0A2H1VU31 A0A3S2NIF5 S4NT84 + More
A0A212FHY8 A0A194RSQ0 A0A194PD09 A0A1W4X6N2 A0A0K8TNL7 A0A1Y1LGY4 A0A1B6DFB6 A0A1B6KXD2 A0A1B6GTP2 A0A2J7RFT0 A0A2P8YS96 D2A0U2 A0A067R9V6 A0A0T6BEJ3 A0A1I8M514

Pubmed

19121390 28756777 23622113 22118469 26354079 26369729 + More
28004739 29403074 18362917 19820115 24845553 25315136

EMBL

BABH01001050 GDQN01001927 JAT89127.1 KZ149987 PZC75654.1 ODYU01004412 + More
SOQ44256.1 RSAL01000084 RVE48400.1 GAIX01012286 JAA80274.1 AGBW02008449 OWR53352.1 KQ459700 KPJ20375.1 KQ459606 KPI91206.1 GDAI01002093 JAI15510.1 GEZM01057686 JAV72141.1 GEDC01012907 JAS24391.1 GEBQ01023868 JAT16109.1 GECZ01004056 JAS65713.1 NEVH01004410 PNF39695.1 PYGN01000391 PSN47116.1 KQ971338 EFA01632.1 KK852606 KDR20367.1 LJIG01001224 KRT85716.1

Proteomes

UP000005204 UP000283053 UP000007151 UP000053240 UP000053268 UP000192223 + More
UP000235965 UP000245037 UP000007266 UP000027135 UP000095301

PRIDE

H9IVG9

Pfam

PF04502 DUF572

Interpro

IPR007590 Saf4/Yju2

ProteinModelPortal

H9IVG9 A0A1E1WQD6 A0A2W1BPX0 A0A2H1VU31 A0A3S2NIF5 S4NT84 + More
A0A212FHY8 A0A194RSQ0 A0A194PD09 A0A1W4X6N2 A0A0K8TNL7 A0A1Y1LGY4 A0A1B6DFB6 A0A1B6KXD2 A0A1B6GTP2 A0A2J7RFT0 A0A2P8YS96 D2A0U2 A0A067R9V6 A0A0T6BEJ3 A0A1I8M514

PDB

5YZG E-value=1.48838e-51, Score=511

KEGG

101738712 no KO assigned | (RefSeq) coiled-coil domain-containing protein 94

GO

PANTHER

PTHR12111

Length:

320

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.06088

Exp number, first 60 AAs:

0.06053

Total prob of N-in:

0.06897

outside

1 - 320

Pi

55.632613

Theta

157.551027

Tajima's D

-1.597268

CLR

39.904922

CSRT

0.0533973301334933

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics