SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07758
Pre Gene Modal
BGIBMGA001253
Annotation
PREDICTED:_uncharacterized_protein_LOC106721447_[Papilio_machaon]
Location in the cell
Extracellular   Reliability : 1.03 Mitochondrial   Reliability : 1.186 Nuclear   Reliability : 1.163 PlasmaMembrane   Reliability : 1.032
 

Sequence

CDS
ATGATTAAATATTTGTTTTTATGCACCATACTATTTGCCTCGTTGGTCAGTTGCATCAACGTGACCACAGTAGATACACAACATGAAAAAGTTAAACCTTCACTCAATACCTCTAAAGAAAACATCAGCAAAGATTCGAAAGTAAATATATTAAGTGAAGGGGGTGCATTGTTGTCAGAAACCCGGACACTTCCTAAAGACACATTGATTGATTTAATGAGCTTAGAGGAAGGAATAACCAAACAAAAAGAAAAACCCATACATCCTAGGAAAGGAGTTGGAAACTATACAATAATAAATTCCACAAATTTACAAAATGTTAGTACTACTGGTAATATTGCAAATACAACTGTTTTGAATTCAACTGAAAAACTTTCAAGTGAAAATGTGATAAGTGATTCTAAAATACCAATTTCTGCATCATCTGAAGCTGGAATACACAAGAAGCCAACATTGCTATCATCAGATAAAATGGACAATGATGCAAATGCACAGGAGAAGTTAACAGAAAGAAAAACAATGATTTTGCCAGATAAAATGACTCAAAGTAAGACAGTTACTAAGCACCCAGGAATGGTAATTCCTGTAGTTATCACAATACTTGTGGTTCCCATGTTTGCTGTGCTTGGATATTTGGCTTTAAAAAGAGGGCAAGAGGCATGGAAAAACAGACATTACAAACGTATGGATTTCCTTCTTGATGGCATGTATAATGACTAG
Protein
MIKYLFLCTILFASLVSCINVTTVDTQHEKVKPSLNTSKENISKDSKVNILSEGGALLSETRTLPKDTLIDLMSLEEGITKQKEKPIHPRKGVGNYTIINSTNLQNVSTTGNIANTTVLNSTEKLSSENVISDSKIPISASSEAGIHKKPTLLSSDKMDNDANAQEKLTERKTMILPDKMTQSKTVTKHPGMVIPVVITILVVPMFAVLGYLALKRGQEAWKNRHYKRMDFLLDGMYND

Summary

Ontologies

Topology

SignalP
Position:   1 - 18,         Likelihood:  0.983963
 
 
Length:
239
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
36.6688
Exp number, first 60 AAs:
13.86312
Total prob of N-in:
0.60916
POSSIBLE N-term signal
sequence
outside
1  -  191
TMhelix
192  -  214
inside
215  -  239
 
 

Population Genetic Test Statistics

Pi
71.706406
Theta
83.309907
Tajima's D
-0.472613
CLR
3.996295
CSRT
0.247087645617719
Interpretation
Uncertain
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