Gene

KWMTBOMO07751

Pre Gene Modal

BGIBMGA001256

Annotation

PREDICTED:_low-density_lipoprotein_receptor-related_protein_4-like_[Bombyx_mori]

Location

Bomo_Chr13(-):6204320-6228095      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.09 Extracellular   Reliability : 1.518 Nuclear   Reliability : 1.193

CDS

ATGCCAGCACCGATCGTCGTTTATATCATTTCATTCTTCTTCTTTTGGCTGTACGTGCTTGCGGATGAACCGATCGGCCAAAATGGACCTCGAGCAACAAACAATTCGGTGGATGCACCGGACCCTCGCTCTCCTTTGGGCAGAGTACCACCATATCAACCACCGCCGGCAGGAATGGGAGTAGGTCCCAATCCAATGAATTCTCCGGGATTTTGGCCACACGGCATCTATACTCGCGTTGAAGGCTGGCATCATCGGCCAAGCCTTCAAAAGGCGATTGATGTGATTCACACCGACCCGGATGATGGACCCCTCAACGAAGGGACAGAAGACGACGCAGGCTGTATTACACCTTGCCTCAAAATCAATTTCTCGTGTCAGATATCCTGCACGTGCATTCCTATGGAAAAACGTTGCGATGGAATTGCTGATTGTGCCGAAGCCGAAGATGAGGCCGGCTGCGCGAGATCCTGTGACGAACATGAAAACCGTACCATTTGTCACAGCACAAATGTGTGCATCGCTTTAGAATGGCTCTGCGATGGAGACAATGACTGCGGGGATTTCTCGGATGAGATCAATTGCGGTGCACCTACAAATTGTACAGCCGATCAATTCCAATGCTCCAACGGCCTATGCATTCATAAAGGATGGGTGTGTGATGGTGACAACGATTGTCGTGACAACTCAGACGAAACTAATTGCACTAAAGGAAGATGTCGTGAAAACCAGTTTACTTGTGCCGTCGGCGAATGCATCTCTCAACATTGGAGATGTGATCACGAACCCGACTGTCCTGATAGCTCTGACGAAGCCGACTGTCCGGTGGAGCTCATGCGTTGCGCAGAAATCGATTTTGAATGCAAAAACACGAAATGCGTTCCCAAGGATTTCCAGTGCGACGGCGACAACGACTGTGGCGACTGGACAGACGAAGACTCGTGCCCAATGGTGCCTGGAAGTTGCAACGCTGGCGAATTCAAATGCAACGACGGCAAATGTATACCGGAAAGATGGCGATGTGACAACGAAAGGGACTGTGCAGACGGTGGAGATGAACTAAACTGCAAACCAAATAGCATACGAAATTGTTCATTAGATGAATATACTTGCGCTGATCGAAGATGTGTACTGAAAACCTGGCTCTGTGATGGAGTTCGGGATTGCACTAATGGTGAAGATGAAATGAACTGCGAAGTTAGCTGCGAAGAAGATCAATACACTTGTAGGCCTCAAGAACATTTAATGAGTAACGCTTTTAGGAATTGCGTAAACAGGAAGCACGTTTGTGATGGTATGAAGGACTGTCCTCGTGGCGATGATGAAGAACGATGTCCGTTGAAGAGAAAATGTTCTGCCGAGGAAAAATGCGAGAAGTTATGCATTACTACGTACGACGGTCATGCAGCCTGCGCTTGTCCTATGGGATTTTTATTAGCTGAAGATAAATACAGTTGCCGAGACATCGATGAGTGTATGTACGAACAAGATCCAGTATGTTCTCAAACATGTTCCAATACAGTCGGAAGTTTCCGTTGTGGTTGCATGACTGGCTACATCTTAAGACCTGATGAAAGGTCTTGTAAGCCAACAGGCGAATCACCAACACTTCTGTTCTCGAATAGGATTGGGATACGACAGGTGTGGTTAACTGGTGATAATTACATGTCCGTGGTCAAAGGTTTACATAATGCGGTAGCTTTAGACTATCATTACGAAAAGAAACTTGTATTCTGGTCTGAAAATAACTTACGAGTTATCCGTGTTGCGCAAATGAATACAAAAAATATGTCAGATGTCATTAGGTGGGGATTAGAGACACCGGCAGGAGTGGCAGTAGATTGGATACACGATCTTCTCTTCTGGACCGATTCAGGAACAAGAAGAGTTGAAGTGGCAACCCTTGATGGTTCCAAAAGAGCGGTTTTAGTTGCCAACGATTTAGACAAACCACGGGCAATTGCTGTACATCCCGGAGACGCATTAGTATTTTGGACAGACTGGGGTCCTAACCCGAAAATTGAACGTGCTGATATGGATGGCGATAAACGCAAAACTGTTATATATGACGAAATTTTTTGGCCTAACGGACTAACTATTGACTATACGGAATCTAAAATATACTGGGCTGATGCAAAGCACCATGTTATCGAAAGAGCTGCATTTGACGGCCGAGATCGGCGCAAGGTCACAACGAAAGGTCTTCCCCATCCGTTCGCGTTAACACTGTTCGATGATGCCATTTACTGGACAGATTGGCATACGAAAAGCATTTCTACCGTTAATAAGAATACAGGAATGGGTATTCAAACTGTGCATGCTGGACTTAATGTCCCTATGGATATTCATAGTTACCATCCCCTCAGGCAATTAAGAACATACAAAAATAAATGTGGCAAAAGCAACGGAGGCTGTAGTCATCTTTGTCTTCCTAATGCATACGGATTTTCCTGTCGATGTCCAGTTGGCTTCAATTTAAATTCTGACGGTCGATCTTGCGAAGAAACTCCCGAAAAACTATTATTGTATGCTCGGAGGAAAGATTTAAGATTGAAACAACTAGAATCTAAGAAGCCAATAGATTCTTTAGACATGGTTATTCCTGTTGAAACTATTAAATCGGCAGTGGCTTTAGACTGGGATCAGAAAAGTAATTCTATCTTTTGGACGGATGTGGAAAAAGACACAATCAACCGCGCATACCTTAATGGATCCCACCAAACTACTATTGTGGATTCTAACCTCATTTGGCCAGCGGGTTTAGCATTTGATTGGATTACTGATAAAATCTACTGGACCGACGGTGGAACAAACAGAATTGAAGTTTCGAAATCTGATGGTAGTATGAGAACTTTGTTAGCTTGGGATCACATTGATAAACCAAGAGATATTGTTGTTAATCCAGAAGGTGGTGTTATGTACTGGTCTGATTGGGGAGCGAGTCCGTGCATTGAAAGAGCCGATATGGACGGTGGTAATCGCAAAAAACTCATCTTCGGACAAATGACTTGGCCTAACGGATTAGCTTTAGACCTTGTACACAATCGTATTTACTGGACCGATGGTGGAAATAAAACGATTGAGTATGCAAATTTAGACGGAACTGGGAGAACAAAGTTAATTGAAAATTTGCCCCATCCTTTTGGTTTGGATTTGTACGGTGACGAAGTATTTTGGACTGATTGGGACACACAGTCAATTCAAGCTGCCAACAAAGATACTGGAGCTAAACGACGAACACTAGGGTCTGGTGTAGCTGGACTTATGGATGTTAGAGTTTTCCACAAGGAAAGAACAAGCGGCTTTAACAGATGCGGCAAGAATAATGGAGGATGTTCACATTTATGCCTCTTGAAACCAGGAGGACGATCTTGTGCCTGTCCTATCGGTATAAAGCTTAATAAAGATGGTAAAACTTGTGCCGATGGTCCTATCAACTATTTGATTTTTGCACACCGTGTGGATATTCGGGTCATATCATTAGACGTACCGTATCTTATTGACGTCGTATTACCGTTGCCACCACTGAAGAATGCCCTGGGCGTGGATGTCGATCACAGCACAGGTCTAATTTACTGGACTGATACGGGACAAAGGAAAATACAACGCGCAACTAGACTAGGAACACATGTTGAAACTGTAATCGGTAATGGCCTACACACTGCTGACGGTATTGTCATCGATTCAACCGGACGCAAGATATATTGGACTGATGGCGGTCGCAACAGTATCGAAGTGGCAGAACTAGATGGTAGGAATAGGAAAGTACTCGTATGGACTGGCCTAGATTCACCTCGAGCCATAGCATTACATTATGAATACGGTTATATGTTTTGGTCAGACTGGGGAACGTCAGCTAAAATCGAAAGAGCAGATATGGATGGCAATAATCGGCGCGTTATTGTGGACAACAAAATCAAATGGCCTAACGGCCTGGCCATAGATAGAATAGAGGGACGTCTTTATTGGAACGATGCTAAAATTTTAACAATAGAAAGTTCCGACTTTGACGGCCACGATCGACGCACTGTTTTAAGTAACGTTCCATACCCTTACGGAATCGTTATCGTTGGTCAGCATATATATTGGACCGATTGGAAGACCAAAGCATTACACAGAGCTGACAAGACTAACGCTTCGGATCCAATAGTTATAAGAAAAAATCTAGAAGGCTTAATGGATATCAGAGCGATTCAGAGTGAACGTGTTTTGGAAAATGCATGTGGTACTGATAATGGCGGGTGTTCTCATCTTTGCCTTCGGTCACCACTCGGCTACACATGTGCGTGTCCAACGGGTATGCCATTCGAAAAAAGCACAACCGACCAAACGCCAAAGAAATGCAAGTCACATCCTGAAGAATTTTTAATATTTGCCACTAGAGGAAGTATTACTTACATTTCTCTTGAAAGTCCCGAGCAGTGGGATGTTACTCTTCCAGTCAAAGAAGTGAAAAATACCATCGCCGTGGACTATCATTGGGACTTAAAGATGATCTTTTATACAGATCTTGATCTGAATGTGATAAGGTCTATAAATATGACGAACATGAGTGAAAGCAAAACAATTATCTCTCAGAAATTGGAAACTCCAAACGGTTTGGGTGTTGATTGGATTGCAAATAATATCTATTGGACGGATAATGAACATAAGGTTATTGAGGTTGCAAGGTTGGACGGATCATCAAGAAAAGTACTCATAACTGGTCTAACTGAACCAAGAGCTTTAGCATTGTTTCCAGCAAAAGGGTATTTATATTGGAGTGATTGGGGTGAACATCCATATATAGAGAGGTCTTACTTAGATGGTAGCCAAAGGCAGATTATCGTGCAAGTTGACTTGGGTTTCCCTAATGGTCTAACAATAGATTACAAAGAAAGAAGACTTTATTGGACTGACGCGCTTAAGGATAGAATTGATACGTCTGATTTAAATGGACAGCATCGAGTCCAACTTGTTCCAGACGCAAAGAACCCTTTTGGAATGACGCAGTTTAAAGATTATATTTACTGGACGGATTGGTACAAAAAATCCATTATCAGAGCAGATAAAAGAACAGGGAAAAACATAACGTTGATCAGAACCAATCTGGAGATGGCGATGGAGATCAAGGCTGTTTCAGCGGACCGCCAGCATGGATGGAACCCGTGCAAGGAATCTAACGGTGGATGTTCACACTTATGCCTTTTCAGAGGCCATGAATATATTTGCGCCTGCCCAGATGATCCGGATCATGTAGAATGCTCAACTGTACCAAAATTCCTGATCGAAAATATCCTTCCGGCGCATTACCCGCCTTACTACGACTATTCTGATATAGAGTTTAAGAAAACAGTAAGGCCCCCACCGACCCCTAGTCCGGACTATTTTGGCAGATGCATGATGGCTGGAGGGATAATATTAATTTCTATTTTAGCATTTCTCTTCGTCACGATTTATTGCGTGAAAATGCTCCGAAATTATCGAGACACTGAACTGAAAGACGAAGAGTTCAGCAATTCTACCGGTCACATATCTTTTCACAATCCAAATTATAGCTGCGCAACGGGAGGTCCGGGGGGTAACGGCCCTGATCATATTGAGCGTCGACAAAATCGATTTCAAGGAATCTTCAAGTACGACAAACAGCAGGAGCGGGTAACGAACGTGTACTACCCTGAGGGAACCAGTTTGCTGCCCACACCTACGCCTCCTCCACCCCAAAGACAAGCCCTCACGACGACAAAGCGACCGCCCACGCATGATGACTTCGAACCGGTGACACTGCACTCCTACGCTTGA

Protein

MPAPIVVYIISFFFFWLYVLADEPIGQNGPRATNNSVDAPDPRSPLGRVPPYQPPPAGMGVGPNPMNSPGFWPHGIYTRVEGWHHRPSLQKAIDVIHTDPDDGPLNEGTEDDAGCITPCLKINFSCQISCTCIPMEKRCDGIADCAEAEDEAGCARSCDEHENRTICHSTNVCIALEWLCDGDNDCGDFSDEINCGAPTNCTADQFQCSNGLCIHKGWVCDGDNDCRDNSDETNCTKGRCRENQFTCAVGECISQHWRCDHEPDCPDSSDEADCPVELMRCAEIDFECKNTKCVPKDFQCDGDNDCGDWTDEDSCPMVPGSCNAGEFKCNDGKCIPERWRCDNERDCADGGDELNCKPNSIRNCSLDEYTCADRRCVLKTWLCDGVRDCTNGEDEMNCEVSCEEDQYTCRPQEHLMSNAFRNCVNRKHVCDGMKDCPRGDDEERCPLKRKCSAEEKCEKLCITTYDGHAACACPMGFLLAEDKYSCRDIDECMYEQDPVCSQTCSNTVGSFRCGCMTGYILRPDERSCKPTGESPTLLFSNRIGIRQVWLTGDNYMSVVKGLHNAVALDYHYEKKLVFWSENNLRVIRVAQMNTKNMSDVIRWGLETPAGVAVDWIHDLLFWTDSGTRRVEVATLDGSKRAVLVANDLDKPRAIAVHPGDALVFWTDWGPNPKIERADMDGDKRKTVIYDEIFWPNGLTIDYTESKIYWADAKHHVIERAAFDGRDRRKVTTKGLPHPFALTLFDDAIYWTDWHTKSISTVNKNTGMGIQTVHAGLNVPMDIHSYHPLRQLRTYKNKCGKSNGGCSHLCLPNAYGFSCRCPVGFNLNSDGRSCEETPEKLLLYARRKDLRLKQLESKKPIDSLDMVIPVETIKSAVALDWDQKSNSIFWTDVEKDTINRAYLNGSHQTTIVDSNLIWPAGLAFDWITDKIYWTDGGTNRIEVSKSDGSMRTLLAWDHIDKPRDIVVNPEGGVMYWSDWGASPCIERADMDGGNRKKLIFGQMTWPNGLALDLVHNRIYWTDGGNKTIEYANLDGTGRTKLIENLPHPFGLDLYGDEVFWTDWDTQSIQAANKDTGAKRRTLGSGVAGLMDVRVFHKERTSGFNRCGKNNGGCSHLCLLKPGGRSCACPIGIKLNKDGKTCADGPINYLIFAHRVDIRVISLDVPYLIDVVLPLPPLKNALGVDVDHSTGLIYWTDTGQRKIQRATRLGTHVETVIGNGLHTADGIVIDSTGRKIYWTDGGRNSIEVAELDGRNRKVLVWTGLDSPRAIALHYEYGYMFWSDWGTSAKIERADMDGNNRRVIVDNKIKWPNGLAIDRIEGRLYWNDAKILTIESSDFDGHDRRTVLSNVPYPYGIVIVGQHIYWTDWKTKALHRADKTNASDPIVIRKNLEGLMDIRAIQSERVLENACGTDNGGCSHLCLRSPLGYTCACPTGMPFEKSTTDQTPKKCKSHPEEFLIFATRGSITYISLESPEQWDVTLPVKEVKNTIAVDYHWDLKMIFYTDLDLNVIRSINMTNMSESKTIISQKLETPNGLGVDWIANNIYWTDNEHKVIEVARLDGSSRKVLITGLTEPRALALFPAKGYLYWSDWGEHPYIERSYLDGSQRQIIVQVDLGFPNGLTIDYKERRLYWTDALKDRIDTSDLNGQHRVQLVPDAKNPFGMTQFKDYIYWTDWYKKSIIRADKRTGKNITLIRTNLEMAMEIKAVSADRQHGWNPCKESNGGCSHLCLFRGHEYICACPDDPDHVECSTVPKFLIENILPAHYPPYYDYSDIEFKKTVRPPPTPSPDYFGRCMMAGGIILISILAFLFVTIYCVKMLRNYRDTELKDEEFSNSTGHISFHNPNYSCATGGPGGNGPDHIERRQNRFQGIFKYDKQQERVTNVYYPEGTSLLPTPTPPPPQRQALTTTKRPPTHDDFEPVTLHSYA

Similarity

Belongs to the ligand-gated ion channel (TC 1.A.9) family.

Uniprot

H9IVH6   A0A2H1VCL3   A0A2A4JXJ3   A0A2W1BPX9   A0A212FHX3   A0A194PD82   + More
A0A0L7LG57   A0A194RSD5   A0A1Y1KJX1   A0A067RKC0   E0VY08   D2A155   A0A139WJB4   K7ITU6   A0A232F3D4   A0A2J7RFN6   A0A182N0V3   A0A182Q2W0   A0A182VVK2   A0A182R204   A0A084VA93   Q7QEK9   A0A2C9H8B1   A0A182V493   A0A182PNS7   A0A182K1T0   A0A182XYF6   A0A1S4FRK7   Q16S43   A0A1I8N054   A0A1J1J1T7   W8AYX7   A0A1B0G1E8   A0A182FJY1   A0A1B0A1T3   A0A0L0BL83   A0A1A9VSW6   B4JLG0   A0A1B0B6I4   A0A1A9YM89   A0A1B0BT39   B4M3E5   B4NPE9   A0A1I8NZY9   A0A1A9WIP0   A0A0M3QZM3   B4L418   A0A3B0K169   A0A182HIT4   A0A1W4VGA2   A0A1W4V3Z0   A0A0C9PMP0   A0A0P9CFL8   A0A0Q5TI48   B3NXH6   B4PX92   B5X533   Q9VXM0   A0A0C9R6J8   A0A0N8P246   A0A182JB48   A0A0P6A3M2   A0A0P5NPU0   A0A0P6FFM9   A0A0P6DJU7   A0A0P6CU56   A0A0P5NVI7   E9HBU7   A0A0P5MRP0   A0A0P5MBZ0   A0A0P6EWP8   A0A0P5MT40   A0A0P5QHZ5   A0A0P5UU43   A0A0P5LGH0   A0A0P6JJZ1   A0A0P6GDT4   A0A0P5LKF2   A0A0P5N4W6   A0A0P5I7Q0   A0A0N8E385   A0A164LMJ4   A0A3B3Q1T1   A0A1V4KGC2   U3JUV3   A0A093G774   A0A3B3Q2Z7   R0LUK0   A0A1D5PKF3   A0A0A0A376   A0A1V4KEI8   A0A2I0MNE6   A0A091SF33   K7GGS8   U3IQR3   A0A093FKI8   A0A3B3Q2E2   A0A151MB49   A0A3M0JHK5   A0A3Q0GV95  

Pubmed

19121390    28756777    22118469    26354079    26227816    28004739    + More
24845553    20566863    18362917    19820115    20075255    28648823    24438588    12364791    14747013    17210077    25244985    17510324    25315136    24495485    26108605    17994087    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    21292972    29240929    15592404    23371554    17381049    23749191    22293439   

EMBL

BABH01001078    BABH01001079    BABH01001080    ODYU01001638    SOQ38142.1    NWSH01000440    + More
PCG76408.1    KZ149987    PZC75664.1    AGBW02008449    OWR53342.1    KQ459606    KPI91197.1    JTDY01001259    KOB74369.1    KQ459700    KPJ20387.1    GEZM01083947    JAV60918.1    KK852422    KDR24262.1    DS235842    EEB18264.1    KQ971338    EFA01584.1    KYB28118.1    NNAY01001070    OXU25251.1    NEVH01004410    PNF39646.1    AXCN02001227    ATLV01003048    KE524109    KFB34887.1    AAAB01008846    EAA06523.5    CH477684    EAT37281.1    CVRI01000063    CRL04825.1    GAMC01020434    GAMC01020432    GAMC01020430    GAMC01020428    JAB86121.1    CCAG010015965    JRES01001701    KNC20826.1    CH916370    EDW00413.1    JXJN01009101    JXJN01019975    CH940651    EDW65320.2    CH964291    EDW86389.2    CP012528    ALC49629.1    CH933810    EDW07296.2    OUUW01000011    SPP86422.1    APCN01004087    GBYB01002393    JAG72160.1    CH902621    KPU81707.1    CH954180    KQS30270.1    EDV46935.1    CM000162    EDX01855.1    KRK06381.1    KRK06382.1    BT046152    AE014298    ACI46540.1    ACZ95304.1    AHN59777.1    AAF48538.1    GBYB01002391    JAG72158.1    KPU81708.1    AXCP01007151    GDIP01035334    JAM68381.1    GDIQ01139505    JAL12221.1    GDIQ01048190    JAN46547.1    GDIQ01076673    JAN18064.1    GDIQ01090321    JAN04416.1    GDIQ01137106    JAL14620.1    GL732617    EFX70780.1    GDIQ01152951    JAK98774.1    GDIQ01169544    JAK82181.1    GDIQ01057033    JAN37704.1    GDIQ01155698    JAK96027.1    GDIQ01113866    JAL37860.1    GDIP01111617    JAL92097.1    GDIQ01180836    JAK70889.1    GDIQ01005018    JAN89719.1    GDIQ01034694    JAN60043.1    GDIQ01179089    JAK72636.1    GDIQ01147255    JAL04471.1    GDIQ01217526    JAK34199.1    GDIQ01066188    JAN28549.1    LRGB01003123    KZS04260.1    LSYS01003385    OPJ82897.1    AGTO01000953    KL215509    KFV64968.1    KB742689    EOB05435.1    AADN05000303    KL870451    KGL88496.1    OPJ82896.1    AKCR02000005    PKK31201.1    KK949629    KFQ57252.1    AGCU01167968    AGCU01167969    AGCU01167970    AGCU01167971    AGCU01167972    ADON01035509    KK629297    KFV54836.1    AKHW03006283    KYO21756.1    QRBI01000144    RMC00329.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053268    UP000037510    UP000053240    + More
UP000027135    UP000009046    UP000007266    UP000002358    UP000215335    UP000235965    UP000075884    UP000075886    UP000075920    UP000075900    UP000030765    UP000007062    UP000076407    UP000075903    UP000075885    UP000075881    UP000076408    UP000008820    UP000095301    UP000183832    UP000092444    UP000069272    UP000092445    UP000037069    UP000078200    UP000001070    UP000092460    UP000092443    UP000008792    UP000007798    UP000095300    UP000091820    UP000092553    UP000009192    UP000268350    UP000075840    UP000192221    UP000007801    UP000008711    UP000002282    UP000000803    UP000075880    UP000000305    UP000076858    UP000261540    UP000190648    UP000016665    UP000053875    UP000000539    UP000053858    UP000053872    UP000007267    UP000016666    UP000050525    UP000269221    UP000189705   

PRIDE

H9IVH6    B5X533    Q9VXM0   

Pfam

PF00057   Ldl_recept_a        + More
PF07645   EGF_CA
PF00058   Ldl_recept_b
PF02931   Neur_chan_LBD
PF02932   Neur_chan_memb
PF12662   cEGF

Interpro

IPR013032   EGF-like_CS        + More
IPR018097   EGF_Ca-bd_CS       
IPR000742   EGF-like_dom       
IPR011042   6-blade_b-propeller_TolB-like       
IPR023415   LDLR_class-A_CS       
IPR000033   LDLR_classB_rpt       
IPR001881   EGF-like_Ca-bd_dom       
IPR036055   LDL_receptor-like_sf       
IPR002172   LDrepeatLR_classA_rpt       
IPR009030   Growth_fac_rcpt_cys_sf       
IPR018000   Neurotransmitter_ion_chnl_CS       
IPR006201   Neur_channel       
IPR036734   Neur_chan_lig-bd_sf       
IPR006202   Neur_chan_lig-bd       
IPR006029   Neurotrans-gated_channel_TM       
IPR036719   Neuro-gated_channel_TM_sf       
IPR000152   EGF-type_Asp/Asn_hydroxyl_site       
IPR026823   cEGF       

SUPFAM

SSF57424   SSF57424        + More
SSF57184   SSF57184       
SSF63712   SSF63712       
SSF90112   SSF90112       

Gene 3D

2.120.10.30     4.10.400.10     2.70.170.10    

CDD

cd00112  LDLa

ProteinModelPortal

H9IVH6   A0A2H1VCL3   A0A2A4JXJ3   A0A2W1BPX9   A0A212FHX3   A0A194PD82   + More
A0A0L7LG57   A0A194RSD5   A0A1Y1KJX1   A0A067RKC0   E0VY08   D2A155   A0A139WJB4   K7ITU6   A0A232F3D4   A0A2J7RFN6   A0A182N0V3   A0A182Q2W0   A0A182VVK2   A0A182R204   A0A084VA93   Q7QEK9   A0A2C9H8B1   A0A182V493   A0A182PNS7   A0A182K1T0   A0A182XYF6   A0A1S4FRK7   Q16S43   A0A1I8N054   A0A1J1J1T7   W8AYX7   A0A1B0G1E8   A0A182FJY1   A0A1B0A1T3   A0A0L0BL83   A0A1A9VSW6   B4JLG0   A0A1B0B6I4   A0A1A9YM89   A0A1B0BT39   B4M3E5   B4NPE9   A0A1I8NZY9   A0A1A9WIP0   A0A0M3QZM3   B4L418   A0A3B0K169   A0A182HIT4   A0A1W4VGA2   A0A1W4V3Z0   A0A0C9PMP0   A0A0P9CFL8   A0A0Q5TI48   B3NXH6   B4PX92   B5X533   Q9VXM0   A0A0C9R6J8   A0A0N8P246   A0A182JB48   A0A0P6A3M2   A0A0P5NPU0   A0A0P6FFM9   A0A0P6DJU7   A0A0P6CU56   A0A0P5NVI7   E9HBU7   A0A0P5MRP0   A0A0P5MBZ0   A0A0P6EWP8   A0A0P5MT40   A0A0P5QHZ5   A0A0P5UU43   A0A0P5LGH0   A0A0P6JJZ1   A0A0P6GDT4   A0A0P5LKF2   A0A0P5N4W6   A0A0P5I7Q0   A0A0N8E385   A0A164LMJ4   A0A3B3Q1T1   A0A1V4KGC2   U3JUV3   A0A093G774   A0A3B3Q2Z7   R0LUK0   A0A1D5PKF3   A0A0A0A376   A0A1V4KEI8   A0A2I0MNE6   A0A091SF33   K7GGS8   U3IQR3   A0A093FKI8   A0A3B3Q2E2   A0A151MB49   A0A3M0JHK5   A0A3Q0GV95  

PDB

4DG6     E-value=1.61077e-161,     Score=1467

KEGG

101739543    K20051 low-density lipoprotein receptor-related protein 4 | (RefSeq) low-density lipoprotein recepto

GO

GO:0060828   GO:0005509   GO:0048513   GO:0030509   GO:0016021   GO:0005230   GO:0004888   GO:1990709   GO:0043679   GO:0097060   GO:1901631   GO:0150094   GO:1904395   GO:0051124   GO:0071340   GO:0016055   GO:0001822   GO:0009953   GO:0042733   GO:0097104   GO:0090090   GO:0005886   GO:0050731   GO:0030279   GO:0009986   GO:0009954   GO:0030971   GO:0031594   GO:0097105   GO:0042803   GO:0050771   GO:0042475   GO:0005515   GO:0006810   GO:0006412   GO:0016301   GO:0016573   GO:0008270   GO:0022891   GO:0003707   GO:0051537  

SignalP

Position:   1 - 21,         Likelihood:  0.940742

 

 

Length:

1926

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

38.02424

Exp number, first 60 AAs:

16.60458

Total prob of N-in:

0.90646

POSSIBLE N-term signal

sequence

inside

1  -  4

TMhelix

5  -  22

outside

23  -  1792

TMhelix

1793  -  1815

inside

1816  -  1926

 

 

Pi

265.87692

Theta

201.564518

Tajima's D

1.221087

CLR

0.154992

CSRT

0.71786410679466

Interpretation

Uncertain