Gene

KWMTBOMO07750

Pre Gene Modal

BGIBMGA000890

Annotation

PREDICTED:_sorting_nexin-25_[Amyelois_transitella]

Location

Bomo_Chr13(+):6172936-6196075      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.077 Nuclear   Reliability : 1.739

CDS

ATGTTGTGGATGTTAATATGTGGTGTTCCACTAGTTTACGTTTTGATTTGGTATTTTCCAATATTATGGAGCCTAATTTATTTGTTATTGTTAGCTATCTTTATAATATTAAGTGTATTCACTCTTAGTTTATGGGGGCATATTGCATTGTCATCACCTTATCATATACCACCGTTTTTGATAGAAAGAATTGAAAAGGAAGTTCGACAATTTGAAGAAGCACTGAAGGAAGATCAGGCAAATTGGCCTCAATCCATGAAAAAATCTCATCTGCCAGTCATATTCGGAAGAACTGTAGACAGTCAATTGCAGCTTCTCATTGATTACATATTGAGAGATTTTGTAACTCGATGGCTGAAAGAATTGGCACATAAACCTGAACCAGTCATAGACAAATTCAAGGAGCATATTTGGGGAGGTATACAAAATTTATATGAAAGGCTATCAAGGGTTGATGCTGAAAAATTACTGGCTAATGATATGGTGGTGAAGATAACTCAACATTTTGAAAGGATAAGAATTGCAAGAAGTTGTGCACTAGAATTGAATCAAGCACCTGTTTTTGCTCTAGCACCCCATCTGACATCTTTCGAAACAGAACAGCATTATTTGAGGCAGATCAGTGAACTTATTATCATGTTTTTGTTGCCGAGATGCTATTCTTTGGCACCAGGATGCCATCTCATGAGGGAAATACTTGCCTGCAAGATTTTACAACCAGCTATAGATCTTGTAACAGAACCAGATTATATAAATCAGAAAATTATTCAATATTTGGAAGCACAAAAAGAAGTAAACGCCATGCATATAAGGACTCATGAATATGCAAAAACGTTTGAGGACTACATACGTCTCATTAATAGTTGCAACAATGTTGACACGCTGAAACGGTTACGGTATGATATAGTAACACAAATAATGCAAGCAACAACGCTCCAAAACGTGAAACGAGCAAAAGGAATTGACCTAGATGCAATAGAAAAAAGTAATACACAACACAACATAAGTCGGCAACAAATAACCGATGCTAAGAAACTTCAGAGGTATATAAATCAACTTACAATAGCGAAAGCGGAGTGTGAAACTGCACTTAGGAAAATGGGCTGGGATGGTGCGTTTCCTACATTTGAGACAGATAGCAAGACGCTACCTTTGCACAAAGTCATGGACAGCGTGACGGGGCGCCGGTATTTGTCGATGTTCTTAGAAAAAATGTGTTCTCAAGGCCTAGTTGGCTTTTGGACGTCAGTGGAAGACCTGCGGCATAGCCCCAGGAGCAGCTGGCATCAGCTCGGTGCCGAGATATTTTATACTTACATAAGATCGCCTAGTGCGGAAATTAAAGTCGATAAGGACACTAGAAAGCGAATGGAATCCTTTCTGCTGGGCGACAAGGGACCAGATGTATTTTATGAAGTACAAGAGACCGTTCTTGATACAATACAAGACAAATATTATCATTCGTTCTTAATGAGTGAGGAATATAAAGCTTTAATTGCTGAACTTGCAACAGAAGAAAATAGCAAAGATACGAACGTGGATAGATCGCCAATAGAAGAGCGGCAATTGTCGAATGAGTCTGTTTCTTCGGCGGAGAGCGTCGCGGGAGCGTTGCACCTAACGGAGCACTCGACGTACGCACGAAGAAAACTGGATCAGCTACAAGAACGACACAACAATAAGATACAGGCTCTAGCTGCTCTGCGAGCGTCGCTGAAGCCGGAGTCCCCTGCCTTGTCCATGCTGGCCAACGAGGTGGAGAAGTTGGCCGGTGAACAGATGAGGCTCGAGGCACACCTGGCCAGGACGGACACGTGGGCCGAGCACTTGGGGCGCTGGCGGGCCTCCGTCCACAGTGCTGACGTAATTGACGAGTCTAAACCACCGCAGTTTGTGATAGTCGTGCACATGGCGGAAAAGGAAGATTCGAACAGCGGGGACCGACCCGAGCAGATCACCACCGGCTGGGTCCTGTTGAGGACGCTCAATGAATTCCAGGACTTACATCGAAAGTTAAGGCCTTTGTGTTCAGAATTGAAAAATTTAGAGCTACCCTCAAACTCTTTTAAATTTTTATTCGGAAAAAACGATAAGAATTCTTTAGACAAAGCAAAAACATTAATACAAAAGTATTTAGAGTTCGTATTAGAAGACGACAGACTAAACCAAAGTGAAGCTTTATATACATTCCTAAACCCTAGCTCGGAGTATTTAAAACAAGAGGACATGCCAAAGAAAAATAAATTCTCATTATCTACATTATTCAAAAGCGCAAGCAGCGAAGCAACGAATAGATCGTCGCAGGAGAAGGAGGCCTTTAACCACATGTCGGCGGACGAAGACGAAATATCGATGTACCTGGATGGCAACGGAGCCGAGGCGGGAAACAAAACGATGACTAATTCCTTGCGAGGGGCCAGCGCGATAGCCGAAGAACGGGACAGCACCGCGGAGCCGCTGTACGCGCTGCTCAGCGAGGTGTTCGACATGCGTGGCGTGTTCCGCTGGCTCCGGAAGACGCTCGTCACCTTCGTGCAGATCACGTACGGACGCACCATCAATAGACAAATAAAAGATACAATATCTTGGCTGTTTTCGGAGCAGATGTTACATTATTACATAAGCGTAGTTATCAAGTCTTGGTGGCCGGGCGGAGTCCTCTCGGAGCACGGCTCGAACAGGAATTTTCAAGATAAAGAGCACACGAGGACCCTCGCGCTGCAGCAGCTGAGCGAGAGCGTGATGGACGCGCTGTCGTCGCTGGTGGGCGCGCAGACGGCGGCCCGCGGCGCGCACAAGCTGTTCCACACGCTGCAGCACACCACGCACAACAAACAACTCTTCTACGAATTGTTCGAACTGGTATTGATAGAAGTATTTCCTGAGCTCAAGCGTTACTATAACTAA

Protein

MLWMLICGVPLVYVLIWYFPILWSLIYLLLLAIFIILSVFTLSLWGHIALSSPYHIPPFLIERIEKEVRQFEEALKEDQANWPQSMKKSHLPVIFGRTVDSQLQLLIDYILRDFVTRWLKELAHKPEPVIDKFKEHIWGGIQNLYERLSRVDAEKLLANDMVVKITQHFERIRIARSCALELNQAPVFALAPHLTSFETEQHYLRQISELIIMFLLPRCYSLAPGCHLMREILACKILQPAIDLVTEPDYINQKIIQYLEAQKEVNAMHIRTHEYAKTFEDYIRLINSCNNVDTLKRLRYDIVTQIMQATTLQNVKRAKGIDLDAIEKSNTQHNISRQQITDAKKLQRYINQLTIAKAECETALRKMGWDGAFPTFETDSKTLPLHKVMDSVTGRRYLSMFLEKMCSQGLVGFWTSVEDLRHSPRSSWHQLGAEIFYTYIRSPSAEIKVDKDTRKRMESFLLGDKGPDVFYEVQETVLDTIQDKYYHSFLMSEEYKALIAELATEENSKDTNVDRSPIEERQLSNESVSSAESVAGALHLTEHSTYARRKLDQLQERHNNKIQALAALRASLKPESPALSMLANEVEKLAGEQMRLEAHLARTDTWAEHLGRWRASVHSADVIDESKPPQFVIVVHMAEKEDSNSGDRPEQITTGWVLLRTLNEFQDLHRKLRPLCSELKNLELPSNSFKFLFGKNDKNSLDKAKTLIQKYLEFVLEDDRLNQSEALYTFLNPSSEYLKQEDMPKKNKFSLSTLFKSASSEATNRSSQEKEAFNHMSADEDEISMYLDGNGAEAGNKTMTNSLRGASAIAEERDSTAEPLYALLSEVFDMRGVFRWLRKTLVTFVQITYGRTINRQIKDTISWLFSEQMLHYYISVVIKSWWPGGVLSEHGSNRNFQDKEHTRTLALQQLSESVMDALSSLVGAQTAARGAHKLFHTLQHTTHNKQLFYELFELVLIEVFPELKRYYN

Uniprot

A0A2W1BQ22   A0A2H1VBC5   H9IUG0   A0A194PJD3   A0A212FHX5   A0A194RSR5   + More
A0A1Y1M2I2   A0A1W4X6P7   A0A1W4XHD4   F4WL67   A0A3L8D8I3   E2BWJ5   A0A195CIA6   A0A151WRB4   A0A195EK76   A0A2A3EHZ7   A0A158NZJ3   E2AR00   A0A195BPA3   A0A0J7KWR0   A0A195FCV2   A0A154PAF5   A0A088A8Q0   A0A026VT11   A0A139WJS4   D2A205   K7ITU5   A0A1B0DM77   A0A0L7RF05   A0A1S4FII0   Q16ZY4   U4UL61   A0A0K8U8S4   A0A0A1XPH5   W8BK78   B0WZ22   A0A1B0CG91   A0A1W4VIM8   B4Q0Q5   A0A067RK77   B4IL52   B4R688   Q9W3N0   A0A1Q3FI08   Q8T4E8   A0A182GXA4   Q29I26   A0A0L0C822   B3NTU9   A0A1I8NGR9   B4NCV8   A0A1I8PMK6   B4JML8   B4L5D0   A0A0A1XHB2   A0A3B0K6W4   B4MAC5   A0A0M4ERA0   A0A1B0F9K0   A0A2J7RFM7   T1PHI8   B4H4J4   E0V953   A0A1Y9HDJ9   A0A310SEI0   A0A182LVF3   A0A182T6L9   A0A182VT22   A0A182J9Z4   A0A1A9VDL8   A0A182PL28   A0A182URB2   Q7Q4R5   A0A182XNK1   A0A182QU64   A0A182JXB7   A0A1J1HHP3   A0A1A9WDB2   A0A182NAC8   A0A034VJM8   A0A210QFZ3   T1INF6   V4AK36   A0A131YWS2   L7M0E1   A0A1E1XK12   A0A131XHD2   A0A1E1XFY0   A0A0P6ESV4   A0A0P5BYV2   A0A0P5DJS6   A0A0P5FLC6   A0A224Z4Z3   A0A0P5EFZ0   A0A147BGH5  

Pubmed

28756777    19121390    26354079    22118469    28004739    21719571    + More
30249741    20798317    21347285    24508170    18362917    19820115    20075255    17510324    23537049    25830018    24495485    17994087    17550304    24845553    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    26483478    15632085    26108605    25315136    20566863    12364791    25348373    28812685    23254933    26830274    25576852    29209593    28049606    28503490    28797301    29652888   

EMBL

KZ149987    PZC75665.1    ODYU01001638    SOQ38143.1    BABH01001081    KQ459606    + More
KPI91195.1    AGBW02008449    OWR53340.1    KQ459700    KPJ20390.1    GEZM01042356    JAV79913.1    GL888207    EGI65030.1    QOIP01000012    RLU16238.1    GL451131    EFN79951.1    KQ977720    KYN00466.1    KQ982807    KYQ50390.1    KQ978747    KYN28653.1    KZ288254    PBC30892.1    ADTU01004645    GL441846    EFN64146.1    KQ976433    KYM87284.1    LBMM01002332    KMQ94967.1    KQ981685    KYN38027.1    KQ434844    KZC08170.1    KK108267    EZA46800.1    KQ971338    KYB28172.1    EFA01504.2    AJVK01006884    AJVK01006885    KQ414609    KOC69316.1    CH477480    EAT40240.1    KB632374    ERL93827.1    GDHF01029252    JAI23062.1    GBXI01001475    JAD12817.1    GAMC01016569    GAMC01016566    JAB89989.1    DS232203    EDS37336.1    AJWK01010859    CM000162    EDX02326.1    KK852422    KDR24261.1    CH480865    EDW53669.1    CM000366    EDX17365.1    AE014298    BT150246    AAF46292.2    AGV77148.1    AHN59464.1    GFDL01007867    JAV27178.1    AY089224    AAL89962.1    JXUM01020077    JXUM01020078    JXUM01020079    KQ560563    KXJ81886.1    CH379064    EAL31580.2    JRES01000777    KNC28406.1    CH954180    EDV47512.2    CH964239    EDW82667.1    CH916371    EDV91961.1    CH933811    EDW06389.1    GBXI01004394    JAD09898.1    OUUW01000042    SPP89957.1    CH940655    EDW66184.1    CP012528    ALC48615.1    CCAG010020064    NEVH01004410    PNF39620.1    KA648287    AFP62916.1    CH479209    EDW32745.1    DS234988    EEB09909.1    KQ767320    OAD53406.1    AXCM01002513    AAAB01008963    EAA12049.5    AXCN02001441    CVRI01000004    CRK87551.1    GAKP01015441    JAC43511.1    NEDP02003825    OWF47677.1    JH431165    KB201890    ESO93906.1    GEDV01005555    JAP83002.1    GACK01008490    JAA56544.1    GFAA01003881    JAT99553.1    GEFH01002122    JAP66459.1    GFAC01000998    JAT98190.1    GDIQ01071838    JAN22899.1    GDIP01178084    GDIP01178083    GDIP01178082    JAJ45320.1    GDIP01201515    GDIP01164724    GDIP01158578    GDIP01141220    GDIP01092225    JAJ64824.1    GDIQ01255322    GDIQ01229030    GDIQ01128316    JAJ96402.1    GFPF01011993    MAA23139.1    GDIP01232470    GDIP01231169    GDIP01231168    GDIP01229017    GDIP01202924    GDIP01199062    GDIP01148922    GDIP01148921    GDIP01148920    GDIP01148919    GDIP01147580    GDIP01147579    GDIP01147578    GDIP01147577    GDIP01141223    GDIP01141222    GDIP01141221    GDIP01137977    GDIP01137976    GDIP01137379    GDIP01133288    GDIP01133287    GDIP01132132    GDIP01120826    JAJ74483.1    GEGO01005570    JAR89834.1   

Proteomes

UP000005204    UP000053268    UP000007151    UP000053240    UP000192223    UP000007755    + More
UP000279307    UP000008237    UP000078542    UP000075809    UP000078492    UP000242457    UP000005205    UP000000311    UP000078540    UP000036403    UP000078541    UP000076502    UP000005203    UP000053097    UP000007266    UP000002358    UP000092462    UP000053825    UP000008820    UP000030742    UP000002320    UP000092461    UP000192221    UP000002282    UP000027135    UP000001292    UP000000304    UP000000803    UP000069940    UP000249989    UP000001819    UP000037069    UP000008711    UP000095301    UP000007798    UP000095300    UP000001070    UP000009192    UP000268350    UP000008792    UP000092553    UP000092444    UP000235965    UP000008744    UP000009046    UP000075900    UP000075883    UP000075901    UP000075920    UP000075880    UP000078200    UP000075885    UP000075903    UP000007062    UP000076407    UP000075886    UP000075881    UP000183832    UP000091820    UP000075884    UP000242188    UP000030746   

PRIDE

H9IUG0    Q9W3N0    Q8T4E8   

Pfam

PF08628   Nexin_C        + More
PF00615   RGS
PF00787   PX
PF02194   PXA
PF00282   Pyridoxal_deC
PF09777   OSTMP1
PF06246   Isy1

Interpro

IPR003114   Phox_assoc        + More
IPR037899   SNX25_PX       
IPR013937   Sorting_nexin_C       
IPR016137   RGS       
IPR001683   Phox       
IPR036871   PX_dom_sf       
IPR036305   RGS_sf       
IPR015424   PyrdxlP-dep_Trfase       
IPR015421   PyrdxlP-dep_Trfase_major       
IPR002129   PyrdxlP-dep_de-COase       
IPR019172   Osteopetrosis-assoc_TM_1       
IPR013087   Znf_C2H2_type       
IPR009360   Isy1       
IPR034905   SNX25       

SUPFAM

SSF64268   SSF64268        + More
SSF48097   SSF48097       
SSF53383   SSF53383       

Gene 3D

3.30.1520.10     3.40.640.10    

CDD

cd06878  PX_SNX25

ProteinModelPortal

A0A2W1BQ22   A0A2H1VBC5   H9IUG0   A0A194PJD3   A0A212FHX5   A0A194RSR5   + More
A0A1Y1M2I2   A0A1W4X6P7   A0A1W4XHD4   F4WL67   A0A3L8D8I3   E2BWJ5   A0A195CIA6   A0A151WRB4   A0A195EK76   A0A2A3EHZ7   A0A158NZJ3   E2AR00   A0A195BPA3   A0A0J7KWR0   A0A195FCV2   A0A154PAF5   A0A088A8Q0   A0A026VT11   A0A139WJS4   D2A205   K7ITU5   A0A1B0DM77   A0A0L7RF05   A0A1S4FII0   Q16ZY4   U4UL61   A0A0K8U8S4   A0A0A1XPH5   W8BK78   B0WZ22   A0A1B0CG91   A0A1W4VIM8   B4Q0Q5   A0A067RK77   B4IL52   B4R688   Q9W3N0   A0A1Q3FI08   Q8T4E8   A0A182GXA4   Q29I26   A0A0L0C822   B3NTU9   A0A1I8NGR9   B4NCV8   A0A1I8PMK6   B4JML8   B4L5D0   A0A0A1XHB2   A0A3B0K6W4   B4MAC5   A0A0M4ERA0   A0A1B0F9K0   A0A2J7RFM7   T1PHI8   B4H4J4   E0V953   A0A1Y9HDJ9   A0A310SEI0   A0A182LVF3   A0A182T6L9   A0A182VT22   A0A182J9Z4   A0A1A9VDL8   A0A182PL28   A0A182URB2   Q7Q4R5   A0A182XNK1   A0A182QU64   A0A182JXB7   A0A1J1HHP3   A0A1A9WDB2   A0A182NAC8   A0A034VJM8   A0A210QFZ3   T1INF6   V4AK36   A0A131YWS2   L7M0E1   A0A1E1XK12   A0A131XHD2   A0A1E1XFY0   A0A0P6ESV4   A0A0P5BYV2   A0A0P5DJS6   A0A0P5FLC6   A0A224Z4Z3   A0A0P5EFZ0   A0A147BGH5  

PDB

5WOE     E-value=1.50048e-16,     Score=215

KEGG

101739689    K17887 sorting nexin-25 | (RefSeq) sorting nexin-25

GO

GO:0035091   GO:0016021   GO:0030512   GO:0030170   GO:0019752   GO:0016831   GO:0008340   GO:0005543   GO:0016020   GO:0003676   GO:0000350   GO:0016192   GO:0006810   GO:0006412   GO:0016301   GO:0016573   GO:0008270   GO:0022891   GO:0003707   GO:0051537  

PANTHER

PTHR22775:SF29  

Length:

968

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

41.5685700000002

Exp number, first 60 AAs:

41.47397

Total prob of N-in:

0.14887

POSSIBLE N-term signal

sequence

outside

1  -  3

TMhelix

4  -  26

inside

27  -  27

TMhelix

28  -  50

outside

51  -  968

 

 

Pi

251.901615

Theta

158.851919

Tajima's D

1.313198

CLR

0.199801

CSRT

0.741212939353032

Interpretation

Uncertain