Gene

KWMTBOMO07749

Pre Gene Modal

BGIBMGA001257

Annotation

Pyridine_nucleotide-disulfide_oxidoreductase_domain-containing_protein_1_[Operophtera_brumata]

Location

Bomo_Chr13(-):6169637-6171265      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 3.12

CDS

ATGTCGGAGATTAATACTACATATTTAATAGTTGGCGGTGGTATTGCTGGAGTTACTTGCGTAGAAACTCTTGCGATCTTGCATCCTGAAAAAACCTTGGTACTAGTAACAGCATCAACACTTGTGAAAAATGTTAGTAACGTTACCTTTTTTGCTAAGACTATAGTGAACTTTGACGTGAATGAAACAGAGGCCACCTCCTTGCAAAAGATCCATCCGAATTTAAAAATTATATATGATTCACTAAAACATCTTGATACTGAAAAGCAGAAAGCTTTGACAGACAAAGGTGTTCATATACAATATGACGTAATTTGTATTTGTACTGGAGGGATACCAAGACTAATTTCAGATTCCAAAAATAGCAAAAGAGTACTGGGCATTAGAGATACAGAATCTGTGAAAGACTTTCAACAAAAATTGAAGACAGGCCGTAGAATGGTTATAGTTGGAAATGGAGGTGCTGCTGAGTTTTTTCAAGAAACCTTTAAAAATGAGAATGAAAGAAAAAATCAAAATACAGTTTTAAGGAGGCATATTTACTCTGAAGAAGACAGTTTGGTATCTTTAAATAAAAATTTAAAATCTGCTGCACTTGGTCCAGATTGGTATAGGAAACTTGAAAACATTAAGTCTGACAGAGGGGTCCAAGAACTCGAAATAGTATATAAAGCTGAAGTAGAATCAGTATTAGAGGATAATAAGAATGAATATCCATTACGTGTACAACTAACAAATTCTCAGCTTGTTGAGTGTGATTTTTTAATATCTGCAACTGGGGTGGAACCATCTGTCAACTTTACATGGGATAAAGTTCCAGAGAAAGGTCAGGATGGAGGATTGGCAGTCAATGAATTTCAAGAGACTAGTATAAAAAATGTATTTGCTGCAGGCGATGTTGCATCAGCTGCATGGGAACATGCCCCACACTGGTTTCAATTACGTCTCTGGACTCAAGCCAGACAAATGGCTGGAATGGCTGCTAAAGCAATGCATGGTAGAATAACAAATCAAGAAGTTTTACAAGATTTCTGTTTTGAACTGTTTACTCATTGCACAAAATTGTTTGGTTATAGAGTCATTTTATTAGGAAAATACAATGGACAAGGCCTAGGCACTGATTATGAAATTCTTCTTCGAACTACTCCTAATGTTGAATACATTAAGTTTGTATTAAAAGAAGGAAAGCTACAAGGAGCAATTTTAATAGGCGAAACTGATCTTGAAGAAATGTGTGAGAACCTGATTCTAGACCAAATTGATTTATCACCATTTGGTGATGATATCTTGAATCCAGATATAGACATTGATGATTATTTTGATTAA

Protein

MSEINTTYLIVGGGIAGVTCVETLAILHPEKTLVLVTASTLVKNVSNVTFFAKTIVNFDVNETEATSLQKIHPNLKIIYDSLKHLDTEKQKALTDKGVHIQYDVICICTGGIPRLISDSKNSKRVLGIRDTESVKDFQQKLKTGRRMVIVGNGGAAEFFQETFKNENERKNQNTVLRRHIYSEEDSLVSLNKNLKSAALGPDWYRKLENIKSDRGVQELEIVYKAEVESVLEDNKNEYPLRVQLTNSQLVECDFLISATGVEPSVNFTWDKVPEKGQDGGLAVNEFQETSIKNVFAAGDVASAAWEHAPHWFQLRLWTQARQMAGMAAKAMHGRITNQEVLQDFCFELFTHCTKLFGYRVILLGKYNGQGLGTDYEILLRTTPNVEYIKFVLKEGKLQGAILIGETDLEEMCENLILDQIDLSPFGDDILNPDIDIDDYFD

Uniprot

H9IVH7   A0A2W1BSP7   A0A0L7LIP5   A0A2A4JWN4   A0A2H1VBD5   A0A194RW24   + More
A0A194PES1   A0A212FHY2   S4P998   A0A182GSK6   A0A023ESP3   W5JPU6   A0A2M4AMI0   A0A182F618   U5EV03   A0A2M4AMS4   A0A182QHR5   W8BQ04   A0A1Q3FHV2   A0A0K8TMX8   Q17JG6   A0A034V168   A0A2M4BL21   A0A0T6AW28   A0A182P4V5   A0A2M4BKW6   A0A182L1Q2   A0A2M4BMI7   A0A182VJ23   A0A067QI01   A0A182UCL6   Q7Q3T9   B0W7M8   A0A2P8YGQ5   A0A0K8W0H9   A0A088AAI3   A0A195CD51   A0A1B6GN58   T1H193   A0A0M9A619   A0A336K4F7   A0A182WUA1   A0A2J7QNL1   A0A2A3E1V3   V9IM63   A0A195FQY3   E2A5Q5   A0A1B6IQ17   A0A1Y1M187   A0A1B6J7I9   A0A182NTR7   D6WL78   K7IRH1   A0A0A9XRI0   A0A182MAK0   A0A146LWL0   A0A1L8DZV9   A0A182W7A6   A0A0J7KNF0   A0A182SYU7   A0A195DMX6   A0A154PCB9   A0A151X7Q3   E9IH74   E2B897   A0A0K8SBP7   F4X1F4   A0A182RC79   A0A182JR63   A0A195BKG2   A0A2R7VRW2   A0A182JIJ6   A0A026WQ93   A0A2R2MTT3   A0A0L7RI72   A0A1B6MII5   A0A1W4WFL3   A0A158NA84   A0A1I8PN84   A0A0A1XSS7   A0A224XNA7   A0A084VNE1   E0VJS8   Q29KL2   R4WPW3   A0A1L8DZE1   R4FNT7   A0A0P4VS51   A0A1B0G2F7   A0A210QJQ7   A0A1B0C695   A0A0M5IYS1   A0A1B0AKN2   A0A1B0AH67   T1PCT2   B3RS58   A0A1B0DM11   A0A2M4ANW9   A0A1A9YRT4   A0A0K8SBP4  

Pubmed

19121390    28756777    26227816    26354079    22118469    23622113    + More
26483478    24945155    20920257    23761445    24495485    26369729    17510324    25348373    20966253    24845553    12364791    14747013    17210077    29403074    20798317    28004739    18362917    19820115    20075255    25401762    26823975    21282665    21719571    24508170    30249741    21347285    25830018    24438588    20566863    15632085    17994087    23691247    27129103    28812685    18719581   

EMBL

BABH01001082    KZ149987    PZC75666.1    JTDY01000982    KOB75209.1    NWSH01000440    + More
PCG76411.1    ODYU01001638    SOQ38145.1    KQ459700    KPJ20391.1    KQ459606    KPI91194.1    AGBW02008449    OWR53339.1    GAIX01003834    JAA88726.1    JXUM01016999    KQ560472    KXJ82230.1    GAPW01001288    JAC12310.1    ADMH02000877    ETN64789.1    GGFK01008611    MBW41932.1    GANO01001230    JAB58641.1    GGFK01008760    MBW42081.1    AXCN02000801    GAMC01007658    GAMC01007657    GAMC01007655    GAMC01007653    JAB98898.1    GFDL01007894    JAV27151.1    GDAI01002090    JAI15513.1    CH477232    EAT46874.1    GAKP01023418    JAC35540.1    GGFJ01004553    MBW53694.1    LJIG01022669    KRT79338.1    GGFJ01004554    MBW53695.1    GGFJ01005032    MBW54173.1    KK853366    KDR08097.1    AAAB01008964    EAA12697.3    DS231854    EDS38063.1    PYGN01000608    PSN43440.1    GDHF01033092    GDHF01007730    GDHF01006091    JAI19222.1    JAI44584.1    JAI46223.1    KQ978009    KYM98141.1    GECZ01006006    JAS63763.1    CAQQ02162574    CAQQ02162575    KQ435727    KOX77967.1    UFQS01000114    UFQT01000114    SSW99854.1    SSX20234.1    NEVH01013194    PNF30168.1    KZ288444    PBC25680.1    JR053022    AEY61842.1    KQ981305    KYN42995.1    GL437023    EFN71252.1    GECU01018729    JAS88977.1    GEZM01045892    JAV77636.1    GECU01012560    JAS95146.1    KQ971343    EFA04075.1    GBHO01021040    GBHO01021039    JAG22564.1    JAG22565.1    AXCM01001558    GDHC01006606    JAQ12023.1    GFDF01002252    JAV11832.1    LBMM01005165    KMQ91769.1    KQ980734    KYN13854.1    KQ434870    KZC09569.1    KQ982446    KYQ56340.1    GL763190    EFZ20079.1    GL446286    EFN88099.1    GBRD01015095    JAG50731.1    GL888529    EGI59682.1    KQ976455    KYM85172.1    KK854016    PTY09410.1    KK107131    QOIP01000012    EZA58180.1    RLU15619.1    KQ414585    KOC70524.1    GEBQ01021348    GEBQ01004308    JAT18629.1    JAT35669.1    ADTU01010075    GBXI01014518    GBXI01000211    JAC99773.1    JAD14081.1    GFTR01006506    JAW09920.1    ATLV01014737    KE524984    KFB39485.1    AAZO01002894    DS235226    EEB13634.1    CH379061    EAL33162.1    AK417716    BAN20931.1    GFDF01002253    JAV11831.1    ACPB03001438    GAHY01000443    JAA77067.1    GDKW01001327    JAI55268.1    CCAG010014651    NEDP02003316    OWF48998.1    JXJN01026508    CP012523    ALC39998.1    JXJN01026397    KA645940    AFP60569.1    DS985243    EDV26459.1    AJVK01006815    GGFK01009158    MBW42479.1    GBRD01015096    GBRD01015094    JAG50732.1   

Proteomes

UP000005204    UP000037510    UP000218220    UP000053240    UP000053268    UP000007151    + More
UP000069940    UP000249989    UP000000673    UP000069272    UP000075886    UP000008820    UP000075885    UP000075882    UP000075903    UP000027135    UP000075902    UP000007062    UP000002320    UP000245037    UP000005203    UP000078542    UP000015102    UP000053105    UP000076407    UP000235965    UP000242457    UP000078541    UP000000311    UP000075884    UP000007266    UP000002358    UP000075883    UP000075920    UP000036403    UP000075901    UP000078492    UP000076502    UP000075809    UP000008237    UP000007755    UP000075900    UP000075881    UP000078540    UP000075880    UP000053097    UP000279307    UP000085678    UP000053825    UP000192223    UP000005205    UP000095300    UP000030765    UP000009046    UP000001819    UP000015103    UP000092444    UP000242188    UP000092460    UP000092553    UP000092445    UP000009022    UP000092462    UP000092443   

PRIDE

H9IVH7   

Pfam

PF07992   Pyr_redox_2        + More
PF18267   Rubredoxin_C
PF01084   Ribosomal_S18

Interpro

IPR036188   FAD/NAD-bd_sf        + More
IPR023753   FAD/NAD-binding_dom       
IPR036291   NAD(P)-bd_dom_sf       
IPR041575   Rubredoxin_C       
IPR036870   Ribosomal_S18_sf       
IPR001648   Ribosomal_S18       

SUPFAM

SSF51905   SSF51905        + More
SSF51735   SSF51735       
SSF46911   SSF46911       

Gene 3D

3.50.50.60     4.10.640.10    

ProteinModelPortal

H9IVH7   A0A2W1BSP7   A0A0L7LIP5   A0A2A4JWN4   A0A2H1VBD5   A0A194RW24   + More
A0A194PES1   A0A212FHY2   S4P998   A0A182GSK6   A0A023ESP3   W5JPU6   A0A2M4AMI0   A0A182F618   U5EV03   A0A2M4AMS4   A0A182QHR5   W8BQ04   A0A1Q3FHV2   A0A0K8TMX8   Q17JG6   A0A034V168   A0A2M4BL21   A0A0T6AW28   A0A182P4V5   A0A2M4BKW6   A0A182L1Q2   A0A2M4BMI7   A0A182VJ23   A0A067QI01   A0A182UCL6   Q7Q3T9   B0W7M8   A0A2P8YGQ5   A0A0K8W0H9   A0A088AAI3   A0A195CD51   A0A1B6GN58   T1H193   A0A0M9A619   A0A336K4F7   A0A182WUA1   A0A2J7QNL1   A0A2A3E1V3   V9IM63   A0A195FQY3   E2A5Q5   A0A1B6IQ17   A0A1Y1M187   A0A1B6J7I9   A0A182NTR7   D6WL78   K7IRH1   A0A0A9XRI0   A0A182MAK0   A0A146LWL0   A0A1L8DZV9   A0A182W7A6   A0A0J7KNF0   A0A182SYU7   A0A195DMX6   A0A154PCB9   A0A151X7Q3   E9IH74   E2B897   A0A0K8SBP7   F4X1F4   A0A182RC79   A0A182JR63   A0A195BKG2   A0A2R7VRW2   A0A182JIJ6   A0A026WQ93   A0A2R2MTT3   A0A0L7RI72   A0A1B6MII5   A0A1W4WFL3   A0A158NA84   A0A1I8PN84   A0A0A1XSS7   A0A224XNA7   A0A084VNE1   E0VJS8   Q29KL2   R4WPW3   A0A1L8DZE1   R4FNT7   A0A0P4VS51   A0A1B0G2F7   A0A210QJQ7   A0A1B0C695   A0A0M5IYS1   A0A1B0AKN2   A0A1B0AH67   T1PCT2   B3RS58   A0A1B0DM11   A0A2M4ANW9   A0A1A9YRT4   A0A0K8SBP4  

PDB

5JCN     E-value=1.44026e-06,     Score=125

KEGG

101739788    no KO assigned | (RefSeq) pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1

GO

GO:0016491   GO:0016021   GO:0005840   GO:0003735   GO:0006412   GO:0016192   GO:0006810   GO:0016301   GO:0016573   GO:0008270   GO:0022891   GO:0003707   GO:0051537   GO:0055114  

Length:

441

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

16.66528

Exp number, first 60 AAs:

16.64278

Total prob of N-in:

0.76214

POSSIBLE N-term signal

sequence

inside

1  -  6

TMhelix

7  -  29

outside

30  -  441

 

 

Pi

126.368773

Theta

133.193917

Tajima's D

-0.634295

CLR

169.004171

CSRT

0.209739513024349

Interpretation

Uncertain