Silkworm Genome Informatics Database

Gene

KWMTBOMO07747

Annotation

putative_otopetrin_[Operophtera_brumata]

Location

Bomo_Chr13(-):6157681-6159655 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.496 Nuclear Reliability : 2.011

CDS

ATGGATGATAGTTCACCGGATTTGTCGCTAAAACTGCGACGCGGGTCCAGCGACTCTCGAGAGTCGTTTTATATGGACTTCGCTCAAGGCATAGATTCAGATATTGAAGAAGTGACGACCATTGAAAGGGTCATCCCCGAACATCCGGGAGGGAGAACTGAAGGCGATGCGGATACGCTAGCAACACCGTCTTGCTTGGATGAAAACAAGGAATTGGCACAATGGCAAGTATCTCATACCTTAATTACTTATTAA

Protein

MDDSSPDLSLKLRRGSSDSRESFYMDFAQGIDSDIEEVTTIERVIPEHPGGRTEGDADTLATPSCLDENKELAQWQVSHTLITY

Uniprot

A0A3S2NW75 A0A2W1BL98 A0A2A4JY40 A0A0L7L2K7 A0A194PD77 A0A194RR87 + More
A0A212ESL5 A0A232EUU7 A0A182MN77 A0A182X7J8 A0A182I9T7 A0A182UPD9 Q7QED6 A0A182KK37 A0A182XY96 A0A182W669 A0A182RYU7 U4UAD4 A0A1S4FER5 A0A195FCU2 A0A090X9Z5 A0A147BGU0 A0A131Y6B7 B7Q0N9 A0A2P8Z7N6

Pubmed

28756777 26227816 26354079 22118469 28648823 12364791 + More
20966253 25244985 23537049 17510324 25970599 29652888 29403074

EMBL

RSAL01000049 RVE50377.1 KZ149987 PZC75668.1 NWSH01000440 PCG76413.1 + More
JTDY01003354 KOB69682.1 KQ459606 KPI91192.1 KQ459700 KPJ20393.1 AGBW02012792 OWR44431.1 NNAY01002084 OXU22132.1 AXCM01002007 APCN01001049 AAAB01008847 EAA06870.5 KB632166 ERL89313.1 KQ981673 KYN38228.1 GBIH01001054 JAC93656.1 GEGO01005433 JAR89971.1 GEFM01002200 JAP73596.1 ABJB010599753 DS833226 EEC12411.1 PYGN01000160 PSN52508.1

Proteomes

UP000283053 UP000218220 UP000037510 UP000053268 UP000053240 UP000007151 + More
UP000215335 UP000075883 UP000076407 UP000075840 UP000075903 UP000007062 UP000075882 UP000076408 UP000075920 UP000075900 UP000030742 UP000078541 UP000001555 UP000245037

Pfam

PF03189 Otopetrin

Interpro

IPR004878 Otopetrin

ProteinModelPortal

A0A3S2NW75 A0A2W1BL98 A0A2A4JY40 A0A0L7L2K7 A0A194PD77 A0A194RR87 + More
A0A212ESL5 A0A232EUU7 A0A182MN77 A0A182X7J8 A0A182I9T7 A0A182UPD9 Q7QED6 A0A182KK37 A0A182XY96 A0A182W669 A0A182RYU7 U4UAD4 A0A1S4FER5 A0A195FCU2 A0A090X9Z5 A0A147BGU0 A0A131Y6B7 B7Q0N9 A0A2P8Z7N6

KEGG

NA

GO

GO:0016021

PANTHER

PTHR21522

Length:

84

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.07138

outside

1 - 84

Pi

272.355106

Theta

230.63093

Tajima's D

0.569085

CLR

0

CSRT

0.533373331333433

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics