Gene

KWMTBOMO07738

Pre Gene Modal

BGIBMGA000888

Annotation

PREDICTED:_protein_sax-3-like_[Bombyx_mori]

Location

Bomo_Chr13(+):5751254-5760637      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 2.29

CDS

ATGTTAGTAGTCAATGATTACTTCGCAGCAGAAATCGGTTCTGTTGAAGGCGGAATGAGCGATGACTACGTCACCAGCGGGGAGGCTCCTTACATAATTGAACAACCACTGGACGTAACGGTTGCTAGACACCAGCCAGCAACTCTGAACTGTCGTGCTGGTGGATCTCCCTCTCCGGCTATAAGATGGTACAAAGGTGGTGTTTTGGTAGTCTCTGATACTCATAGAAGCATACTACCAGCTGGAGGACTTTTCTTCTTACGGGCCACGCATGGACGAGTACACTCGGACGCTGGTGTTTACTGGTGTGAGGCGACAAATTCCTATGGAACGGCAAGGAGCAGAAATGCGACTCTACACGTTGCCGTTCTTCGGGAAGAGTTTAGACTTGAGCCGGAATCAAAGCAGTCAGCGCAAGGAGACACCGTAGTTCTTGAATGTTTACCGCCAAGGGGCTCTCCGGAACCAAACGTGTATTGGAAAAAGAACGGTCAAACTTTGCTCTTTGATGGCGATTCTAGAATGCATTTGGTGGACGGTGGAAACTTAGTAATACAAGATGCCAGACAAACTGACGCCGGCAGATATCAATGTATCGCAAGGAATGCGGCAGGTACCAGGGAATCGGCCATAGCTACACTTAAAATACATATTAAACCGTACTTGATCACGGGGCCTGAAGATGTTGTCGCGCAGACTGGTAGTAGCGTGACATTTCAATGTCGCGTTGGTGGAGATCCTCTTCCCGACGTACTCTGGCGACGATCAGCTGGAGGAGGCAATATGCCACTGGGTCGCGTTAAAGTCTTAGACGACGGAAGCCTTAGACTTGACAATGTCATCTTGGCCGACGAAGGAGAATACTCGTGCGAAGCCGAAAATTCCGTTGGTGCTGTCAGCGCCAGCGGATATCTTACAGTATACGATCCACCATCAATAAATTTAAGCCCAAATTCTGTCAACGTGGAAAGTGGTAATGTTGCTAGATTTACATGCACTGCAACCGGTCGTCCTGAACCTACAATGTTCTGGAGTGTTGAAGGAAATAGGACAATAATTTTCCCCGGTATGTCGAGAGACAAATACCACGCTACGGCTGTCTTCGATGGAGTTACGGTACTTACAATCAACGATACTGACAAAAACGACAGTCGAAATACCATAGTTTGTTCGGCGGTTAACTATGCCGGCAGTTCGTTTGTCCGGGGGAAACTAACCGTGACGTCAGACGATGACCGCCCACCGCCAATCATAACAAACGGGCCCTCTAACCAAACTTTACCTATAAAATCGATGGCAGTTTTCCCCTGCACAGCGATCTGTACACCTGAACCAATCATAGCATGGTATTTCGAAGGGGAAGCATTAATACAAAATCATAGAAGGAATGTGACTAATGACGGAACTCTCGTATTGAAGGATTTAGATAAAAGCGATAGCGGCACCTATACTTGTGTTGCATCTTCTCGTCACGGTAAATACGTGTGGAGCGGGGCTTTATTAGTCGATAGCCCTATAAACCCGAATATACATTTTTTCCGAGCAGCTGACGTATCATCTTTACCTGGTCCGCCGACAAAACCTATAACTCACAATGTTACAGATACTAGCGTAACATTATCTTGGAGTCAAAATAATAAAATTGGCTCCTCATCCATACTTGGATATCAAGTGGAGGTATTTTCAAGAGAAACCCTCTCAGGGAATAATACGCCGAGGAATTCTCGAGGATGGGTCGTTATTGCGAGACGGGTTCATCAAACTCATTACGTTGTGAAATCGCTTATTCCTGGAATCACCTACATGTTTATTGTAAGAACAGAAAATTCACATGGCTTGTCTGGTCCTAGTCCGGTTTCCGATTCGGTTACCGTCGGCGATGATTCGAACTCTTTGTGGGAAGGTACCGGAGTTTCTAACAGTACAGAGTACAGAAACAATATATTGACAGACCACATTGTGGAACTAATCGAAGCAACGCCAATAGATTCAAAAACCATTAAACTAATGTGGGAAATTTTAAATTTTTACTACTTGGAAGGGCTTTTTATATACTTCAGACCCCTTGATAATATAACGATCGAATACGAAATGAAAACTATTTTACATTCCAACGATGTCTCGGGGTTCGAAATCACGTCGTTGAGGAAGTACACGAAATACGAGTTTTTCCTCATACCTTTTTACAAAAAATTTGAAGGAAAACCCTCAAACTCAAGGGTTGCACAAACATTAGACGATGTGCCCGATGGTCCGCCAATAAATATAGAAATGTTTATTTTGAACACGACAACAGTACATCTGAAATGGTCACCACCAGAGCTTCAATTACAAAATGGTATAATCACTGGTTACAACGTTGTTGTGAATTGGTTGGATGTACCAGCGAATAAGTCTATGGTGGCAATCAACACTACCGTCCATCAAGCGACTAGCTTAATCATGACTAACTTGACTTCTGGCGTCAGTTACTCTGTGCAAATCGCAGCCGAAACTATAATAGGTTTAGGGCCATTCAGTCAAAAAGTTTATTTTAATATTGATTCTCGATCTGTTGGATTGGATCTTCTATCAAGGTATCCGATGAATGGAGAAGTTTCTATAGTTGCTGGTGACTTTGTTATGGAAACGTGGTTTTACTTTTTAATTGGAGCGATTGTGTTGTTCAAAATAATTGTGATCGCAGGCATAATTTATGTACGAAAATATAACATATTCGCCAAAAAGTCTGCACTTCCGAACATTTATGATTCTAACGGAACGAGCTTAGTGACACAGATGAATATCAAGGCAGCTGTTTCACTGTCGCACCCGTTAACAAGTTGTTACAACAAAAATACGGTGACCAAGACTGAGTCGTTGCTCTGGATGGAAAATCAACCGGGCGTCTGTTTGTCCGGAAATCAAACATCGCAAAGTAAAGAAAAGACTAATTTTGAATACGATAAAGTGACTCATCAACTACCAGAGTATGCTGAAGTAACATCCGCTAGAGCCAATGAATGGAATACAAATAAGACAGCAACCTCTCCAGCTGCTTATGCTTCTGTGACTTTAGTAGCCAATACGAGACAATGTGTTAGTTCATTGGGCTGGTTTCCTCCTGGTGGTAAAAATGTCGATACTTTCGACAATCGATATGGGGCAGATGAAGAGCTGTATCCTGCTAGCAATGGTGGCTATTACAATCGAAACGTTTACAGTGAAAAGTATTTTCAAGGACATCCAAACGTTTTGAAATTCTACGATCTACCTTCAATGGAGAAATCACAAAAAGCACAGTTGAGATACAATCAAAGCTTAGAAGAGCGGAAGGCGGATAAAAATTCGAAAGCGGATGTGACGCAATCGCTTATAGGACGAACATATGGAATAAGTTCTAGAAAAAATTCTGAATCTGAAACAACGTACCGAGCCTTTGGTGAATTTGAATCAGACGAAGAGTCCTATGATCATAATGGAGGTTACGATGAGTTGCAAGCAATGCAGTCACAAAGACAACGACCACAGCATCAGTACGAAAGGCCTAATTTTGACAACGATGGTACGAGGACGTTAGCTCGTCTGACGTCGTTCCGGAATGGGCAAGGAGTGCTTACCACGGTTTCAAAGTCGTCGCATCCACCGACACATCCACCACCCGCGCCCCATCCCCGGGTAGACTCCGTGACCCGGTAG

Protein

MLVVNDYFAAEIGSVEGGMSDDYVTSGEAPYIIEQPLDVTVARHQPATLNCRAGGSPSPAIRWYKGGVLVVSDTHRSILPAGGLFFLRATHGRVHSDAGVYWCEATNSYGTARSRNATLHVAVLREEFRLEPESKQSAQGDTVVLECLPPRGSPEPNVYWKKNGQTLLFDGDSRMHLVDGGNLVIQDARQTDAGRYQCIARNAAGTRESAIATLKIHIKPYLITGPEDVVAQTGSSVTFQCRVGGDPLPDVLWRRSAGGGNMPLGRVKVLDDGSLRLDNVILADEGEYSCEAENSVGAVSASGYLTVYDPPSINLSPNSVNVESGNVARFTCTATGRPEPTMFWSVEGNRTIIFPGMSRDKYHATAVFDGVTVLTINDTDKNDSRNTIVCSAVNYAGSSFVRGKLTVTSDDDRPPPIITNGPSNQTLPIKSMAVFPCTAICTPEPIIAWYFEGEALIQNHRRNVTNDGTLVLKDLDKSDSGTYTCVASSRHGKYVWSGALLVDSPINPNIHFFRAADVSSLPGPPTKPITHNVTDTSVTLSWSQNNKIGSSSILGYQVEVFSRETLSGNNTPRNSRGWVVIARRVHQTHYVVKSLIPGITYMFIVRTENSHGLSGPSPVSDSVTVGDDSNSLWEGTGVSNSTEYRNNILTDHIVELIEATPIDSKTIKLMWEILNFYYLEGLFIYFRPLDNITIEYEMKTILHSNDVSGFEITSLRKYTKYEFFLIPFYKKFEGKPSNSRVAQTLDDVPDGPPINIEMFILNTTTVHLKWSPPELQLQNGIITGYNVVVNWLDVPANKSMVAINTTVHQATSLIMTNLTSGVSYSVQIAAETIIGLGPFSQKVYFNIDSRSVGLDLLSRYPMNGEVSIVAGDFVMETWFYFLIGAIVLFKIIVIAGIIYVRKYNIFAKKSALPNIYDSNGTSLVTQMNIKAAVSLSHPLTSCYNKNTVTKTESLLWMENQPGVCLSGNQTSQSKEKTNFEYDKVTHQLPEYAEVTSARANEWNTNKTATSPAAYASVTLVANTRQCVSSLGWFPPGGKNVDTFDNRYGADEELYPASNGGYYNRNVYSEKYFQGHPNVLKFYDLPSMEKSQKAQLRYNQSLEERKADKNSKADVTQSLIGRTYGISSRKNSESETTYRAFGEFESDEESYDHNGGYDELQAMQSQRQRPQHQYERPNFDNDGTRTLARLTSFRNGQGVLTTVSKSSHPPTHPPPAPHPRVDSVTR

Uniprot

H9IUF8   A0A0U1XIU8   A0A2H1V775   A0A2W1BSL5   A0A2A4JMN6   A0A0L7LFP2   + More
A0A212F0C1   A0A194PCZ2   A0A194RSN0   A0A182JEU5   Q16RH0   A0A182YHF3   A0A182MVZ4   A0A182VCV4   A0A084W5J2   A0A182N8T3   A0A182RAB6   D6WZ02   H6UDZ4   A0A182VSV7   A0A182QZ93   A0A0P6IZ71   Q174G3   A0A1S4H3F3   A0A182MIG6   A0A182VSW1   A0A182RAB3   A0A182FMX2   A0A182FMX6   A0A182N8S9   A0A1J1I0W1   A0A1S4H3H1   W5J9Y4   Q5TNT4   B3MNB6   A0A182PK68   A0A182Q5Y2   B4P3H5   A0A1J1HZ51   A0A182XIW4   Q9GPP6   A0A182JQB0   B3N8E5   A0A1W4WA30   Q9VPZ7   A0A182PK71   B4Q735   B4JA77   B4LT33   A0A1B0G8V9   A0A0M4E336   A0A1I8PI08   A0A182I0T0   Q29LF7   A0A0P6HMX2   B4ID81   A0A1I8NIF4   A0A3B0JGV5   B4KIJ9   W8BR00   B4GQ14   A0A0P6INR0   A0A0J9QUK1   C0PTX4   A0A0M5IVV9   B3N8U7   A0A182YHF1   B3MNC7   A0A336LZK2   B0WYN3   A0A182XIW2   A0A182V3E7   A0A1Y1KMF8   A0A1A9VZK8   A0A1B0B0V4   A0A182JK74   A0A2H8TIS5   J9K158   A0A224Z7J4   A0A2S2Q4Y0   T1JDC0  

Pubmed

19121390    26625973    28756777    26227816    22118469    26354079    + More
17510324    25244985    24438588    18362917    19820115    26999592    12364791    20920257    23761445    17994087    17550304    11163179    11163180    11163264    11163265    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    15632085    25315136    24495485    22936249    28004739    28797301   

EMBL

BABH01001120    KF831573    AIT40270.1    ODYU01001033    SOQ36688.1    KZ149983    + More
PZC75750.1    NWSH01001025    PCG73046.1    JTDY01001379    KOB74031.1    AGBW02011149    OWR47144.1    KQ459606    KPI91186.1    KQ459700    KPJ20399.1    CH477710    EAT36999.1    AXCM01000305    ATLV01020663    KE525304    KFB45486.1    KQ971363    EFA09265.2    JN634959    AEZ54712.1    AXCN02001863    GDUN01000784    JAN95135.1    CH477411    EAT41462.1    AAAB01008980    AXCM01001883    CVRI01000037    CRK93220.1    ADMH02002068    ETN59665.1    EAL39306.3    CH902620    EDV31073.2    CM000157    EDW87242.1    CRK93235.1    AF312580    AAG41426.1    CH954177    EDV57332.2    AE014134    BT015246    AAF51387.2    AAT94475.1    AGB92403.1    CM000361    EDX03326.1    CH916368    EDW03751.1    CH940649    EDW63864.2    CCAG010023825    CCAG010023826    CP012523    ALC37946.1    APCN01005257    CH379060    EAL34088.3    GDIQ01040642    JAN54095.1    CH480829    EDW45507.1    OUUW01000004    SPP79943.1    CH933807    EDW11342.2    GAMC01007287    JAB99268.1    CH479187    EDW39686.1    GDIQ01003918    JAN90819.1    CM002910    KMY87459.1    BT071819    ACN58582.1    ALC37956.1    EDV57347.2    EDV31084.2    UFQT01000346    SSX23424.1    DS232193    EDS37143.1    GEZM01078910    JAV62582.1    JXJN01006839    JXJN01006840    GFXV01002135    MBW13940.1    ABLF02040421    ABLF02040442    GFPF01011254    MAA22400.1    GGMS01003612    MBY72815.1    JH432102   

Proteomes

UP000005204    UP000218220    UP000037510    UP000007151    UP000053268    UP000053240    + More
UP000075880    UP000008820    UP000076408    UP000075883    UP000075903    UP000030765    UP000075884    UP000075900    UP000007266    UP000075920    UP000075886    UP000069272    UP000183832    UP000000673    UP000007062    UP000007801    UP000075885    UP000002282    UP000076407    UP000075881    UP000008711    UP000192221    UP000000803    UP000000304    UP000001070    UP000008792    UP000092444    UP000092553    UP000095300    UP000075840    UP000001819    UP000001292    UP000095301    UP000268350    UP000009192    UP000008744    UP000002320    UP000091820    UP000092460    UP000007819   

PRIDE

H9IUF8    Q9GPP6    Q9VPZ7    C0PTX4   

Pfam

PF07679   I-set        + More
PF00041   fn3

Interpro

IPR013098   Ig_I-set        + More
IPR036116   FN3_sf       
IPR013783   Ig-like_fold       
IPR036179   Ig-like_dom_sf       
IPR003961   FN3_dom       
IPR003598   Ig_sub2       
IPR007110   Ig-like_dom       
IPR003599   Ig_sub       
IPR013106   Ig_V-set       

SUPFAM

SSF49265   SSF49265        + More
SSF48726   SSF48726       

Gene 3D

2.60.40.10    

CDD

cd00063  FN3

ProteinModelPortal

H9IUF8   A0A0U1XIU8   A0A2H1V775   A0A2W1BSL5   A0A2A4JMN6   A0A0L7LFP2   + More
A0A212F0C1   A0A194PCZ2   A0A194RSN0   A0A182JEU5   Q16RH0   A0A182YHF3   A0A182MVZ4   A0A182VCV4   A0A084W5J2   A0A182N8T3   A0A182RAB6   D6WZ02   H6UDZ4   A0A182VSV7   A0A182QZ93   A0A0P6IZ71   Q174G3   A0A1S4H3F3   A0A182MIG6   A0A182VSW1   A0A182RAB3   A0A182FMX2   A0A182FMX6   A0A182N8S9   A0A1J1I0W1   A0A1S4H3H1   W5J9Y4   Q5TNT4   B3MNB6   A0A182PK68   A0A182Q5Y2   B4P3H5   A0A1J1HZ51   A0A182XIW4   Q9GPP6   A0A182JQB0   B3N8E5   A0A1W4WA30   Q9VPZ7   A0A182PK71   B4Q735   B4JA77   B4LT33   A0A1B0G8V9   A0A0M4E336   A0A1I8PI08   A0A182I0T0   Q29LF7   A0A0P6HMX2   B4ID81   A0A1I8NIF4   A0A3B0JGV5   B4KIJ9   W8BR00   B4GQ14   A0A0P6INR0   A0A0J9QUK1   C0PTX4   A0A0M5IVV9   B3N8U7   A0A182YHF1   B3MNC7   A0A336LZK2   B0WYN3   A0A182XIW2   A0A182V3E7   A0A1Y1KMF8   A0A1A9VZK8   A0A1B0B0V4   A0A182JK74   A0A2H8TIS5   J9K158   A0A224Z7J4   A0A2S2Q4Y0   T1JDC0  

PDB

6IAA     E-value=2.42425e-135,     Score=1240

KEGG

101740786    K06754 roundabout, axon guidance receptor 2 | (RefSeq) protein sax-3-like

GO

GO:0016021   GO:0030017   GO:0016319   GO:0048036   GO:0008406   GO:0030424   GO:0005886   GO:0007411   GO:0007419   GO:0016201   GO:0008038   GO:0022409   GO:0042803   GO:0003151   GO:0030335   GO:0035050   GO:0042685   GO:2000274   GO:0001764   GO:0007432   GO:0005515   GO:0008270   GO:0005840   GO:0006412   GO:0016301   GO:0016573   GO:0022891   GO:0003707   GO:0051537  

Length:

1225

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

23.86561

Exp number, first 60 AAs:

1e-05

Total prob of N-in:

0.00024

outside

1  -  877

TMhelix

878  -  900

inside

901  -  1225

 

 

Pi

297.233452

Theta

206.48399

Tajima's D

1.170321

CLR

0.105361

CSRT

0.713914304284786

Interpretation

Uncertain