SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07735
Annotation
PREDICTED:_lipopolysaccharide-induced_tumor_necrosis_factor-alpha_factor_homolog_[Papilio_xuthus]
Transcription factor
Location in the cell
Extracellular   Reliability : 1.959
 

Sequence

CDS
ATGTTAAAGGGAATTGTGAATACAAAAAACAGGGCAGTCATGAACGTCGTTCCAATATATACTAGAAGAACTAAAGATGCGTGTCCGTCATGCCGTACAGTCTTAGAAGAAAATGTAGAAACAGAAATTGCTATTGAATCTCATCTTATTGTTATTCTACTACTATCCATGCTTCTATCATGCTTACCATTACCTGTTTACGTGTCGTCGTGTAAGCACATTGATCATTACTGCCCAAACTCTAAGGTGTTCTTTATTTCATACAAATATTATTGGATATCACTGAAGAGATGA
Protein
MLKGIVNTKNRAVMNVVPIYTRRTKDACPSCRTVLEENVETEIAIESHLIVILLLSMLLSCLPLPVYVSSCKHIDHYCPNSKVFFISYKYYWISLKR

Summary

Pfam
PF10601   zf-LITAF-like
Interpro
IPR006629   LITAF        + More
IPR037519   LITAF_fam       

Ontologies

Topology

Length:
97
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
18.43883
Exp number, first 60 AAs:
10.78912
Total prob of N-in:
0.60104
POSSIBLE N-term signal
sequence
inside
1  -  97
 
 

Population Genetic Test Statistics

Pi
163.105052
Theta
151.397959
Tajima's D
0.209693
CLR
0.240452
CSRT
0.427378631068447
Interpretation
Uncertain
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