Silkworm Genome Informatics Database

Gene

KWMTBOMO07725

Pre Gene Modal

BGIBMGA000881

Annotation

PREDICTED:_uncharacterized_protein_LOC105841917_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr13(+):5367122-5371984 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 2.471

CDS

ATGAGTAAACCGATTTGTATAGTGCTGCTGAGTTTCTTTATATTATTTAATTTTCCAGCGTCAATTCAAGGCTACAGACATTTTATAGACTTGGAAACCGACGGTGTCGAGACAATATTTGCGACTGAAAATGAAAATGTTAACATAGAATGCAAGACGGATGTGCCGATGGCGTATTGTGGATTCGTGCACCCATCTGGGAAACGATACTCATTTTCAGGAACAACGCTAAGCGCCGGTCACTGCTTCAAAAACATCACAGTGACACCAGAAGACGACGGAGAATGGCGCTGTCACAGCGGCGGTCACGAAACCGGCGTCGAAATAATAAAAACAATCGAATTAAGGGTCGTCAACGAAGTGACCGCTTTATGGAAAAACGTTACGGTTCTTCACGCGAAATCTGTCTCGTTGGTTTGTCTAACTACAAAACGACTGACGCCGCTCAGCTACTGTCGCTTCGAACCTCCCAAGGGGAGACCGTTCAACATAGCCGAAGACGTGACGCCCGATAACGCCATCTTAGGTAGATTCTACTTTCCAACGAACATGAGTTTGGATCGCGGAGACTGTGCCGTAACTATAAACAATGTGAAATACGACGATTACGGCACGTGGACGTGCGGTGCAGGACTCGACGATGGAAACGAACACACTGATACTATAAATGTAAAAGTAAAAGGAATTTACACCATGTCGTTCGCAGCCGCAGCTGGTATCACGATAGTGTGCATAGTGATAATCGCATTAATCGGATTTCTCGCCTGGAAGAGACGCGAGTTTTTGGGCAGCACGCCGAGACCGACGCCCGAGCCGGCCCACGAGTTGGAACCCCTACAGGGCCACTCGGCGAGGAGAGGCGATGTTGATGTTCCCGAAGTCAGAGTCGTACCTCCGTCTGAAGCAAGTTCTTCACAGTCAACGTAG

Protein

MSKPICIVLLSFFILFNFPASIQGYRHFIDLETDGVETIFATENENVNIECKTDVPMAYCGFVHPSGKRYSFSGTTLSAGHCFKNITVTPEDDGEWRCHSGGHETGVEIIKTIELRVVNEVTALWKNVTVLHAKSVSLVCLTTKRLTPLSYCRFEPPKGRPFNIAEDVTPDNAILGRFYFPTNMSLDRGDCAVTINNVKYDDYGTWTCGAGLDDGNEHTDTINVKVKGIYTMSFAAAAGITIVCIVIIALIGFLAWKRREFLGSTPRPTPEPAHELEPLQGHSARRGDVDVPEVRVVPPSEASSSQST

Uniprot

H9IUF1 A0A3S2LR16 A0A212EY32 A0A194PEQ7 A0A2H1VGT2 H9IUQ1 + More
A0A182N3A9 A0A2W1BRE2

Pubmed

19121390 22118469 26354079 28756777

EMBL

BABH01001167 RSAL01000316 RVE42604.1 AGBW02011630 OWR46403.1 KQ459606 + More
KPI91179.1 ODYU01002500 SOQ40059.1 BABH01000686 KZ149942 PZC76881.1

Proteomes

UP000005204 UP000283053 UP000007151 UP000053268 UP000075884

PRIDE

H9IUF1 H9IUQ1

Pfam

PF07686   V-set        + More
PF03184   DDE_1
PF08238   Sel1

Interpro

IPR036179   Ig-like_dom_sf        + More
IPR003599   Ig_sub
IPR013783   Ig-like_fold
IPR013106   Ig_V-set
IPR004875   DDE_SF_endonuclease_dom
IPR011011   Znf_FYVE_PHD
IPR013083   Znf_RING/FYVE/PHD
IPR011990   TPR-like_helical_dom_sf
IPR006597   Sel1-like

SUPFAM

SSF48726 SSF48726 + More
SSF57903 SSF57903

Gene 3D

2.60.40.10 3.30.40.10 1.25.40.10

ProteinModelPortal

H9IUF1 A0A3S2LR16 A0A212EY32 A0A194PEQ7 A0A2H1VGT2 H9IUQ1 + More
A0A182N3A9 A0A2W1BRE2

KEGG

105841917 no KO assigned | (RefSeq) uncharacterized LOC105841917

GO

GO:0016021 GO:0003676 GO:0046872 GO:0005515 GO:0003924 GO:0016020 GO:0006508 GO:0016301 GO:0016573 GO:0008270 GO:0022891 GO:0003707 GO:0051537

SignalP

Position: 1 - 24, Likelihood: 0.987314

Length:

308

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

40.52505

Exp number, first 60 AAs:

17.72938

Total prob of N-in:

0.75235

POSSIBLE N-term signal

sequence

inside

1 - 4

TMhelix

5 - 22

outside

23 - 233

TMhelix

234 - 256

inside

257 - 308

Pi

177.059527

Theta

154.216161

Tajima's D

0.295128

CLR

0.059494

CSRT

0.447877606119694

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics