SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07710
Pre Gene Modal
BGIBMGA001270
Annotation
PREDICTED:_heparan-alpha-glucosaminide_N-acetyltransferase_[Amyelois_transitella]
Location in the cell
PlasmaMembrane   Reliability : 4.906
 

Sequence

CDS
ATGCCTTTTACCATTGAAACTCTGCTTCTCCTCCTGGGCACATTGTTGACAGTATGGGTGCTCTATGGCATAATGAAATTGATCATGTCAAAAGTCAGAAGAACCGGTAAACTTAGATACGGAGATAAGGAGCTGGCGATACAACAAAGATTAAGAGCGCTGGATACTTTCAGAGGAATGGCGATAGTGTTCATGATCTTCGTGAATGACGGCGCGGGCGGATACTGGTGGATGGAACACGCCACGTGGAACGGTATGGTAGCTGGAGACCTCGTCTTTCCAGCTTTCCTCTGGATCATGGGTGTATGCATTCCTCTCTCCGTTAAGAGCGCATTTGCCAAAGGTATACCCCGTTGGAAGATCGTCATGCACATTGTCAGACGTTCGATAATGATGTTCTTTTTGGGAATGTCTTTGAATACGATATACGGTTCGAACGTTTTGCAAGAGCTGCGTATATTCGGCGTCCTTCAGAGGCTTGCAGTTGCTTACCTCGTGGCGGCAGGCTTCTATGCGTTGACCGCACCAAAGTTTTACACTCCTCCTAGGGGTGCATGCGGTCAGGCGTTAAAAGACGTGTTGTCTTGCTTGTGGTGCTGGGTTCTGGCGATCGTCTTGGTGACTGTTCACAGCGTCATAACATTTATCATTCACCATCCCGACTGTCCACCAGGTTACTTGGGACCTGGTGGGAAGCACGATGAGTGGGTCGCTCCGGAGTGCAGTGGAGGTGCTGCTGGATTCATTGACCGACTCATCTTAGGGGAATCACATTTGTACCAAAGGAGCGATGCGAGGAATGTCTATGGAGGTCCACCTACCGACCCTGAAGGACTATTGGGGTGCGTCACGTCAGCTGTGCAAGCTCTGATCGGTATCCAAGCCGGCGCCACAGTGCTGCTACAGCGGTCGCACAAAGCGCGCGTTTCAAGATGGCTCGCCTGGGCGCTTGTGTTCGCACTAGCCGGGGCACTACTCGCCGGCTTCTCCAGGGAGCACGGGGTTATACCTATCAATAAGAATCTTTGGTCAACTTCTTTCGTGTTGGTGACGTCGGCATGCTGCCTTCTACTGCTGAGTTTCTGCTATACACTCACCGATGCTTGGAGGATTTGGAACGGAGGGCCATTTCGTTCTCCTGGACTCAACGCTATAGCTCTCTACGTAGGACACTCACTATGTGCACATTTGTTCCCCTTTCACTGGAAAATCCCTAATATGGAAACGCATACAATCAAGCTACTTGAGGCCGTCTGGGGCACAGCCTTGTGGGTCATCATTGCTCATGTCATGGCCAAGAAAAAGGTGTTCATAACACTATAG
Protein
MPFTIETLLLLLGTLLTVWVLYGIMKLIMSKVRRTGKLRYGDKELAIQQRLRALDTFRGMAIVFMIFVNDGAGGYWWMEHATWNGMVAGDLVFPAFLWIMGVCIPLSVKSAFAKGIPRWKIVMHIVRRSIMMFFLGMSLNTIYGSNVLQELRIFGVLQRLAVAYLVAAGFYALTAPKFYTPPRGACGQALKDVLSCLWCWVLAIVLVTVHSVITFIIHHPDCPPGYLGPGGKHDEWVAPECSGGAAGFIDRLILGESHLYQRSDARNVYGGPPTDPEGLLGCVTSAVQALIGIQAGATVLLQRSHKARVSRWLAWALVFALAGALLAGFSREHGVIPINKNLWSTSFVLVTSACCLLLLSFCYTLTDAWRIWNGGPFRSPGLNAIALYVGHSLCAHLFPFHWKIPNMETHTIKLLEAVWGTALWVIIAHVMAKKKVFITL

Summary

Similarity
Belongs to the G-protein coupled receptor 1 family.
EMBL
ODYU01002500    SOQ40072.1    KZ149946    PZC76750.1    BABH01001182    KQ460947    + More
KPJ10566.1    KQ459606    KPI91161.1    NWSH01000400    PCG76672.1    NEVH01024980    PNF16223.1    PNF16224.1    KK853125    KDR11024.1    GBYB01002311    GBYB01014805    JAG72078.1    JAG84572.1    GANO01003642    JAB56229.1    GL439483    EFN67159.1    KQ977276    KYN04414.1    KQ978739    KYN28739.1    KQ983135    KYQ47182.1    KQ976455    KYM85054.1    KQ981305    KYN42875.1    GAMC01017560    GAMC01017559    JAB88996.1    GL450241    EFN81312.1    GL888070    EGI68051.1    JRES01000948    KNC26888.1    GAKP01021539    JAC37413.1    AJWK01026305    KQ414721    KOC62736.1    GBXI01015615    GBXI01015255    GBXI01014774    GBXI01012308    GBXI01008447    GBXI01003981    GBXI01001965    JAC98676.1    JAC99036.1    JAC99517.1    JAD01984.1    JAD05845.1    JAD10311.1    JAD12327.1    GECU01007466    JAT00241.1    GAKP01021543    GAKP01021541    GAKP01021538    GAKP01021535    JAC37417.1    KQ434820    KZC07019.1    KK107148    QOIP01000009    EZA57392.1    RLU19063.1    QCYY01001328    ROT78813.1    GFDF01000922    JAV13162.1    GFDL01002224    JAV32821.1    GDHF01004228    JAI48086.1    JTDY01000777    KOB75916.1    AE014298    AY122161    AAF45996.1    AAM52673.1    AHN59343.1    GDRN01105252    GDRN01105251    JAI57768.1    CH916370    EDV99953.1    GGFL01002222    MBW66400.1    CH480819    EDW53119.1    CH933812    EDW05888.1    CH954180    EDV45857.1    GGFK01006942    MBW40263.1    GEBQ01004322    JAT35655.1    GDAI01000068    JAI17535.1    GECZ01020543    JAS49226.1    ACPB03016402    ADMH02002165    ETN58096.1    CH477204    EAT47948.1    GEDC01003486    JAS33812.1    NNAY01000612    OXU27404.1    GBHO01044346    GBHO01044343    GBRD01007851    JAF99257.1    JAF99260.1    JAG57970.1    GECU01031103    JAS76603.1    GBHO01044348    GBHO01044344    JAF99255.1    JAF99259.1    CH964239    EDW82099.2    GAHY01001759    JAA75751.1    JXJN01022448    KK121017    KFM79557.1    JXUM01019724    KQ560553    KXJ81914.1    GDIQ01222438    JAK29287.1    GDIQ01146628    JAL05098.1    GDIP01116925    JAL86789.1    CM000162    EDX01157.1    GDIP01164290    JAJ59112.1    DS235853    EEB18822.1    AXCM01002573    CH940655    EDW66232.1    CH902621    EDV44423.1    CCAG010018157    CCAG010018158    AXCN02000519    KQ435720    KOX78571.1    GFJQ02004546    JAW02424.1    APCN01001493    ATLV01024044    KE525348    KFB50425.1    GEZM01062668    JAV69548.1    GDIQ01201615    JAK50110.1    LRGB01000770    KZS16035.1    CVRI01000047    CRK98129.1    GDIQ01209846    JAK41879.1    KQ971321    EFA00684.1    GDIQ01005241    JAN89496.1    GBBM01003458    JAC31960.1   
Pfam
PF07786   DUF1624        + More
PF16401   DUF5009
PF07690   MFS_1
PF07368   DUF1487
PF00001   7tm_1
Interpro
IPR012429   DUF1624        + More
IPR032176   DUF5009       
IPR023298   ATPase_P-typ_TM_dom_sf       
IPR011701   MFS       
IPR009961   DUF1487       
IPR036259   MFS_trans_sf       
IPR020846   MFS_dom       
IPR017452   GPCR_Rhodpsn_7TM       
IPR005395   NPFF_rcpt       
IPR000276   GPCR_Rhodpsn       
SUPFAM
SSF81665   SSF81665        + More
SSF103473   SSF103473       

Ontologies

Topology

Length:
440
Number of predicted TMHs:
11
Exp number of AAs in TMHs:
224.45235
Exp number, first 60 AAs:
24.4766
Total prob of N-in:
0.00266
POSSIBLE N-term signal
sequence
outside
1  -  4
TMhelix
5  -  24
inside
25  -  55
TMhelix
56  -  78
outside
79  -  90
TMhelix
91  -  113
inside
114  -  124
TMhelix
125  -  143
outside
144  -  152
TMhelix
153  -  175
inside
176  -  195
TMhelix
196  -  218
outside
219  -  277
TMhelix
278  -  300
inside
301  -  311
TMhelix
312  -  329
outside
330  -  343
TMhelix
344  -  366
inside
367  -  378
TMhelix
379  -  400
outside
401  -  414
TMhelix
415  -  432
inside
433  -  440
 
 

Population Genetic Test Statistics

Pi
234.828168
Theta
166.462258
Tajima's D
2.022833
CLR
0.446502
CSRT
0.888455577221139
Interpretation
Uncertain
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