Silkworm Genome Informatics Database

Gene

KWMTBOMO07709

Pre Gene Modal

BGIBMGA000874

Annotation

PREDICTED:_cyclic_AMP_response_element-binding_protein_A_isoform_X3_[Bombyx_mori]

Location

Bomo_Chr13(+):4931696-5074301 View in EpiBrowser

Transcription factor

TF_bZIP

Location in the cell

Nuclear Reliability : 4.418

CDS

ATGCACGATATCTTGGATGAAGATGAAAGGTCCGACTGGCTGATCGAACGTGACTCCAAATCCGGCGTGGTGCTACACGATAGATTAATGACAGATGCGGCCCTAGGCGCTGCTGCACCCATCAAAACAGAACACTCGTATAGTCTACACTCCGATGTCGAATCAGCGCCACCCTCGCCGCATCATACCAAAGTTGATGATATGGAAGACGAATGCTACCCAGCGATGCCGGCCAGCGCCTGGAGTAGTCGGCGACGGTCCAGTGAATCGCCGCCCCGGGAAGTGAAGTCGGAGCCTAAATCTGAACCGGAGTCCCCGACAAGCTCCTGTCCCCCTTCACCGACACCTGGCACACCGCTCACACATCTTGACTATGTTATTGATCATACGACCGGAACTATTCACATGCCACAAGCAGTGCTACAGAAGGTCGGAGCGGCCGGGGTGCCACAGTTGCTACTCAGCGCAGCACCGCGACTCGCCACATCGCTCAACTCAAATAAACTCTCCATTAAAGTCACATCCAGCTCGGGTGCTTCAGGTTTCAATTTGCCCCCGACTCCGCCGTCGTCCCTCTCGTCGTCGGACAGCGAGGGGGCGTTGTCCCCCGCGCACGAGGCCGCGCCGCCCCCCGCGCCCCCGGCCCCCTCGCGCCGCCCGCACCTCTACGTGTCACACCACACGAGGCAGCCCATCAACACGCCACTCATCAGCAGTCAGCCGAAAGGTTCAACGGGAACCTTGGTGTTGACTGATGAAGAAAAACGCACTCTGTTAGCGGAAGGTTACCCGGTGCCTACACGCCTACCTCTCACCAAGGCCGAGGAGAAATCCCTCAAGAAAATCAGGAGGAAAATTAAAAACAAGATATCCGCACAAGAAAGCAGACGCAAGAAGAAAGAGTACATGGACCAACTCGAGAGGAAGGTCGAGATCCTGATATCGGAGAATGATGACTACAGAAAGAGAGTCGAGACTTTAGAACAGAAGAACGCCAGTCTCCTCAGCCAAGTAGCCTCTCTGCAAGCCATGGTGGCGAGGGGCGCTCGGAAGTGA

Protein

MHDILDEDERSDWLIERDSKSGVVLHDRLMTDAALGAAAPIKTEHSYSLHSDVESAPPSPHHTKVDDMEDECYPAMPASAWSSRRRSSESPPREVKSEPKSEPESPTSSCPPSPTPGTPLTHLDYVIDHTTGTIHMPQAVLQKVGAAGVPQLLLSAAPRLATSLNSNKLSIKVTSSSGASGFNLPPTPPSSLSSSDSEGALSPAHEAAPPPAPPAPSRRPHLYVSHHTRQPINTPLISSQPKGSTGTLVLTDEEKRTLLAEGYPVPTRLPLTKAEEKSLKKIRRKIKNKISAQESRRKKKEYMDQLERKVEILISENDDYRKRVETLEQKNASLLSQVASLQAMVARGARK

Uniprot

A0A194PJ98 A0A0L7LK30 A0A212EZE2 A0A194R016

Pubmed

26354079 26227816 22118469

EMBL

KQ459606 KPI91160.1 JTDY01000777 KOB75923.1 AGBW02011306 OWR46853.1 + More
KQ460947 KPJ10565.1

Proteomes

UP000053268 UP000037510 UP000007151 UP000053240

Pfam

PF00170 bZIP_1

Interpro

IPR004827 bZIP

ProteinModelPortal

A0A194PJ98 A0A0L7LK30 A0A212EZE2 A0A194R016

KEGG

101743362 K09048 cyclic AMP-responsive element-binding protein 3 | (RefSeq) cyclic AMP response element-bindin

GO

GO:0003700 GO:0006355 GO:0043565 GO:0050353 GO:0016491 GO:0016573 GO:0008270 GO:0022891 GO:0003707 GO:0051537

Length:

351

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00411

Exp number, first 60 AAs:

0.00016

Total prob of N-in:

0.02421

outside

1 - 351

Pi

203.158643

Theta

172.602017

Tajima's D

0.656976

CLR

0.290388

CSRT

0.566021698915054

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics