SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07699  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA001274
Annotation
PREDICTED:_carboxypeptidase_Q-like_isoform_X1_[Papilio_polytes]
Location in the cell
Cytoplasmic   Reliability : 2.721
 

Sequence

CDS
ATGAATTTCCTCTCAGTAATTCTATTCTCTTTGAGTTTAAGTGTGTGCTTAGCCAAACAACTACCGAAGCACGAAGATAAATGCCATAATTTACTGGGCGATGAATTGATCGCTGAGATATTGTCTTACGAGAAAGTTAAAGACGAAATTTTAAACTATGTCTTACAAGGTGATTTTAAAGGTCAAACCTATGATCAATTGGCCAAATTTGTTGATAAGTTCGGGGCCCGACCTTCGGGATCTGAAGTATTGGAACGTTCAATTGATTATATGATCGAGTTGACTCGGGAAGAAGATATAAATGATATTGTTACTGAAGAATTAGAAGTTCCTCATTGGGTCAGAGGTGAAGAAAAAATAACAATGCTCGAACCTAGAGTCAAAGACATAAGTTTGCTGGGTTTAGGACGCAGTGCAAGTACTCCACCAGAAGGGATTACTGCCGAAGTTATAGTATTCGAGAATTACGATCAATTAGACAAAGCCCTCGATGAAGATGTCAGAGGAAAGATAGTTTTATACGACCCAATTTTCACAACGTACAGTGAAACAAATCAATACAGAACGCAGGGTGCTACTAAAGCTGCCGCCAAAGGGGCCGTTGCTTCGTTGGTGAGATCCATAGCGCCTTTTTCTATAAATTCCCCTCACACCGGATCGCAGACATACGGCGATGAAGCGAATAAAATTCCCACAGCAGCTATCACTTTAGAAGACGCCGATCTTATACGAAGAATGTACGATCGAGGCGAAAATATTGTATTGAACATCAAAATGAGTTCAACACTTGACACAAAAGTATCAAGAAATACTATAATTGATCTGAAAGGGAGTGTTCATCCTGAGAAATTAGTAATCGTCTCAGGTCATATTGATAGCTGGGATGTTGGACAAGGAGCCATGGATGACGGCGGTGGCCTATTCATTAGCTGGGCAGCTCCGGTCATTTTGAAACGATTGAACCTTATACCAAAAAGGACTGTTAGATCCATTTTCTGGACAGCAGAAGAATTAGGCTTGGTTGGCGCATACGCTTATGAAGAAGCTCACCGAAACGAAAGTCACAATATTAATTTTATTATGGAGTCTGATGAAGGTACTTTTGCTCCGTTAGGTTTGATCGTGGCAGGAACTGATAAAGCCAGGTGCATCGTTGCGGAAGTACTTAAGCTGTTCGAATCTATAAATGCTTCAACTTTAATTGAAGACGATAGCCCTGGTTCTGATATAAGTGTTATTATAAAAACAGGAATCCCTGGAGCAAGCCTTCACAATGAAAATGAAAAATATTTTTGGTTCCATCACACAGAAGGCGATACAATGAACGTAGAAAGCCCTGAAGAGCTCGATCTCGGAGCAGCTTTTTGGACAGCGGTAGCTTATATTATAGCTGATATTTCTGTAGACATCCCTCGCTAA
Protein
MNFLSVILFSLSLSVCLAKQLPKHEDKCHNLLGDELIAEILSYEKVKDEILNYVLQGDFKGQTYDQLAKFVDKFGARPSGSEVLERSIDYMIELTREEDINDIVTEELEVPHWVRGEEKITMLEPRVKDISLLGLGRSASTPPEGITAEVIVFENYDQLDKALDEDVRGKIVLYDPIFTTYSETNQYRTQGATKAAAKGAVASLVRSIAPFSINSPHTGSQTYGDEANKIPTAAITLEDADLIRRMYDRGENIVLNIKMSSTLDTKVSRNTIIDLKGSVHPEKLVIVSGHIDSWDVGQGAMDDGGGLFISWAAPVILKRLNLIPKRTVRSIFWTAEELGLVGAYAYEEAHRNESHNINFIMESDEGTFAPLGLIVAGTDKARCIVAEVLKLFESINASTLIEDDSPGSDISVIIKTGIPGASLHNENEKYFWFHHTEGDTMNVESPEELDLGAAFWTAVAYIIADISVDIPR

Summary

EMBL
BABH01001213    NWSH01007446    PCG62968.1    RSAL01000457    RVE41646.1    JTDY01002866    + More
KOB70573.1    KZ149946    PZC76763.1    AGBW02014249    OWR42016.1    ODYU01012931    SOQ59473.1    KQ459606    KPI91152.1    KQ460947    KPJ10556.1    PCG62969.1    PZC76765.1    ODYU01005659    SOQ46741.1    NWSH01002099    PCG69199.1    BABH01001228    KPJ10557.1    GDHC01003964    JAQ14665.1    KPI91153.1    GBHO01028692    GBHO01028690    GBRD01012378    GDHC01009938    JAG14912.1    JAG14914.1    JAG53446.1    JAQ08691.1    GDHC01001178    JAQ17451.1    JQ653044    AFM38216.1    JR035614    JR035616    JR035617    JR035619    AEY56542.1    AEY56544.1    AEY56545.1    AEY56547.1    JR035621    JR035624    AEY56549.1    AEY56552.1    JTDY01005618    KOB66823.1    JR035613    JR035615    JR035618    JR035620    AEY56541.1    AEY56543.1    AEY56546.1    AEY56548.1    JR035622    JR035623    AEY56550.1    AEY56551.1    KZ288357    PBC27121.1    PBC27122.1    GEDC01016472    GEDC01000320    JAS20826.1    JAS36978.1    KQ434850    KZC08566.1    LJIJ01000168    ODN01176.1    GEZM01012967    JAV92843.1    ACPB03005084    GAHY01002045    JAA75465.1    QCYY01001532    ROT77368.1    GDIQ01232433    JAK19292.1    GL732642    EFX69094.1    GDIQ01232434    JAK19291.1    GDIQ01232432    JAK19293.1    GDIQ01042767    JAN51970.1    GDIQ01040118    JAN54619.1    GDIP01058450    GDIQ01042768    JAM45265.1    JAN51969.1    KQ435789    KOX74509.1    GDIP01122640    GDIQ01061715    JAL81074.1    JAN33022.1    GDIP01201994    GDIQ01154770    GDIP01058452    GDIQ01051316    GDIQ01042769    LRGB01000512    JAJ21408.1    JAN51968.1    KZS18795.1    GDIP01083545    GDIQ01061714    JAM20170.1    JAN33023.1    GDIP01060700    JAM43015.1    GDIQ01141482    GDIP01121438    GDIP01058451    JAL10244.1    JAL82276.1    GDIP01225879    JAI97522.1    GDIP01060701    JAM43014.1    GDIQ01151925    JAK99800.1    GDIP01119543    JAL84171.1    GDIP01225880    JAI97521.1    GDIP01225881    JAI97520.1    GDIP01060702    JAM43013.1    GDIQ01049919    JAN44818.1    GDIP01228085    JAI95316.1    GDIQ01009486    JAN85251.1    GDIQ01059661    JAN35076.1    GDIQ01059662    JAN35075.1    GDIQ01059663    JAN35074.1    GDIP01102645    JAM01070.1    GDIQ01205514    JAK46211.1    GGMS01008658    MBY77861.1    GALX01004405    JAB64061.1    QOIP01000007    RLU21093.1    KK107499    EZA49732.1    KQ414657    KOC65752.1    GFXV01004189    MBW15994.1    ABJB010101123    ABJB010366810    ABJB010739401    ABJB011077291    DS674535    EEC03817.1    GG666456    EEN69541.1    KQ760176    OAD61647.1    KR068535    AMO02552.1    RCHS01002970    RMX44643.1    GDIQ01034566    JAN60171.1    BT126899    AEE61861.1    DS497676    EFA11805.1    JX053095    AFK11323.1    KB202152    ESO92095.1    GECZ01012278    JAS57491.1    KQ981010    KYN10343.1    KQ981689    KYN37903.1    GBYB01009546    GBYB01014947    JAG79313.1    JAG84714.1    MUZQ01000042    OWK61438.1    JX211815    AFM90129.1    PBC27120.1    BT045870    ACI34132.1    ADTU01020714    LSMT01000090    PFX28063.1    PFX28064.1    FX985538    BBF97872.1    GL440609    EFN65651.1    KQ976593    KYM79684.1    KQ978231    KYM96205.1    AGTO01000551    AGTO01000552    AGTO01010671    AGTO01020790    AGTO01020791    KQ982588    KYQ54095.1   
Pfam
PF04389   Peptidase_M28        + More
PF02225   PA
Interpro
IPR039866   CPQ        + More
IPR007484   Peptidase_M28       
IPR003137   PA_domain       
IPR002052   DNA_methylase_N6_adenine_CS       
PDB
3IIB     E-value=3.63971e-48,     Score=484

Ontologies

Topology

SignalP
Position:   1 - 18,         Likelihood:  0.998450
 
 
Length:
472
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.15871
Exp number, first 60 AAs:
0.01614
Total prob of N-in:
0.00120
outside
1  -  472
 
 

Population Genetic Test Statistics

Pi
147.494397
Theta
175.994785
Tajima's D
-0.535444
CLR
2.128953
CSRT
0.242237888105595
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
28556443 VKDEILNYVLQGDFK 100.00 1e-06
28556443 YMDCLEAYGLER 100.00 8e-04
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