SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07696
Annotation
PREDICTED:_uncharacterized_protein_LOC106139223_[Amyelois_transitella]
Location in the cell
PlasmaMembrane   Reliability : 4.818
 

Sequence

CDS
ATGTATAATATCTCAATATTAGTGGTGCTGTTGTATAGTTGGAGGATCGGCGTCAACGCCAAGAGATATAAAGAACTGGACGACGTTTATTATGGTGTACAGATAGCGTATTTCGCGATAATTGGAACGCAGATGTTCATGATCGTCTTAAGCATATTCCTGTTTTACGGGATTTATAAAGAAAACGTCGCGTTTCTGGTGCCGTGGGTGGTGGGCTGCATGACCTTCATGGCGCTCGAAGCTATGGCGATGGTCTACTCGAACATACTAAGAGATCATGTTAACAAGCAATTTGACTCGATGTGCAAAGCCGAAATATCATTTTTAATACCGAGAATATTTCTAAATTGCCTTTGCATCTGGTGTGTCCTGCGGCTTTACCACTTGCTGCGAGCCGGCGTGACCTGGAAGGGTGCGGTGCCGATAGAGCTGTGA
Protein
MYNISILVVLLYSWRIGVNAKRYKELDDVYYGVQIAYFAIIGTQMFMIVLSIFLFYGIYKENVAFLVPWVVGCMTFMALEAMAMVYSNILRDHVNKQFDSMCKAEISFLIPRIFLNCLCIWCVLRLYHLLRAGVTWKGAVPIEL

Summary

EMBL
KZ149946    PZC76764.1    NWSH01001905    PCG69727.1    RSAL01000173    RVE45096.1    + More
AGBW02009317    OWR51096.1    KQ460947    KPJ10555.1    JTDY01002866    KOB70574.1    AXCN02001144    ADMH02001207    ETN63676.1    NEVH01020859    PNF21007.1    KQ971338    EFA02621.2    AAAB01008986    CM000363    EDX11017.1    CH480834    EDW46568.1    GAMC01001753    JAC04803.1    JRES01000760    KNC28550.1    CH940647    EDW69922.2    CH933809    EDW18907.2    KRG06405.1    CCAG010013884    CH902618    EDV40984.2    CM000159    EDW95383.2    CH954178    EDV52314.2    AE014296    BT010023    AAN11663.2    AAQ22492.1    CH964095    EDW79147.2    CM002912    KMZ00476.1    OUUW01000002    SPP76537.1    CH379070    EAL30416.3    JXJN01024352    JXJN01024353    JXJN01024354    CH916366    EDV97602.1    CH479215    EDW33529.1    ATLV01021671    KE525321    KFB46815.1    APCN01002432    AK342689    BAH72626.1    AXCM01002606    GGMR01019118    MBY31737.1    GGMS01000077    MBY69280.1    CH891812    KRK05308.1    KQ459606    KPI91151.1    GEDC01009511    JAS27787.1    GBGD01003232    JAC85657.1    CVRI01000044    CRK96607.1    CRK96602.1    GDIP01169298    JAJ54104.1    GL732584    EFX74327.1    GDIQ01141782    JAL09944.1    GDIQ01128901    JAL22825.1    GDIQ01221007    JAK30718.1    GDIQ01079049    JAN15688.1    GDIQ01091546    JAL60180.1    GDIQ01233662    JAK18063.1    LRGB01000115    KZS20740.1    GDIQ01234861    JAK16864.1    GDIP01010236    JAM93479.1    GDIP01169297    JAJ54105.1    GDIQ01146231    JAL05495.1    GDIP01125456    JAL78258.1    GDIQ01221008    JAK30717.1    JH431987    GDIQ01222559    JAK29166.1    GDIQ01069767    JAN24970.1    BDGG01000005    GAU99544.1    MTYJ01000093    OQV15132.1    HQ288068    ADY39493.1   
Pfam
PF15860   DUF4728
Interpro
IPR031720   DUF4728       

Ontologies

Topology

Length:
144
Number of predicted TMHs:
3
Exp number of AAs in TMHs:
72.36685
Exp number, first 60 AAs:
28.30685
Total prob of N-in:
0.34011
POSSIBLE N-term signal
sequence
outside
1  -  34
TMhelix
35  -  57
inside
58  -  63
TMhelix
64  -  86
outside
87  -  105
TMhelix
106  -  128
inside
129  -  144
 
 

Population Genetic Test Statistics

Pi
191.655849
Theta
178.156852
Tajima's D
-1.025989
CLR
0.988035
CSRT
0.127693615319234
Interpretation
Uncertain
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