SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07695
Pre Gene Modal
BGIBMGA001275
Annotation
PREDICTED:_carboxypeptidase_Q-like_[Amyelois_transitella]
Location in the cell
Cytoplasmic   Reliability : 1.93
 

Sequence

CDS
ATGTATGAAGATTATTCTAAGTTCATAGATACATTTGGAGCACGTTTGGCGGGAAGTAAAGCTCTAGAAAAAGCTATAGATCACATGGTAAATCTGACACGACAAAATGGCTTGAACGACGTGACAACGGAAGAAGTTGACATACCATACTGGCAACGTATTTACGAATCGGCAAACATGTTCGAACCATATTTAAAAAAAATTTCAATCCTTGGGTTAGGAACTAGCGTGAGCACTCCTGCTGAGGGTATCAAAGCAGAAGCCATTGTAATAAAAAGTTTTGACGAACTTGAAAAAACTGATGAAAATAAAATAAAAGGGAAAATTGTCGTCTTTGATCCACCTTTTGTGAGTTATGGTGAAACTGTTGTTTATAGAAGTCTAGGAGCTTCAAAGGCTTCCAGAAAAGGTGCTGTAGCTACTTTAGTCCGAAGCATTACACCATTCTCTATATATTCTCTTCACACCGGAGCCCAGGACTATGAAAATAATGTTACAAAAATACCTACTGCAGCTATAACTCACGAAGACGCAGACTTATTTAGAAGACTTCAAAATCTTGGCGAAAAAATAGTCCTTAAAATTCATATGTCTTATGCTATGTCCAGAAAGATATCAAGGAATACCATTATTGATTTAAAAGGCAAAGAAAGCCCCGAAAAACAAGTTATCGTGTCAGGACACATTGATAGCTGGGATGTAGGCCAGGGCGCTATGGATGACGGTGGGGGTATGATGATAAGTTGGTTCGTTCCTGTAATACTGAACATTTTAAAACTAAAACCAAGACGAACAATCCGAGCGATACTATGGACTGCAGAAGAGCCCGGTCTGATAGGTGCTGAAGCATATCTAACAAAACACATTAACGAAACTTCAAATATAAATTTTATCATGGAATCTGATGAAGGGACGTTCAAGCCTCTAGGGTTAGATGTCGCCGGCAGTACCAATGCTCGTTGCATTATAGCTGAAGTACTGAAACTGTTTACACCCATTGATAAAATGAAGGAAAGTGAATATCCGGGCTCGGATATGACGTTATTCGTGCAAAAGGGAATTCCCGGGGCATCATTATTGAACGAGAATGAGCGTTACTTTTGGTTTCATCACAGTGAAGGTGACACAATGAACGTACAAAATCAAGAGGACGTAGTTGCTTGTGCCGCGTTCTGGGCGGCTTTTTCGTATGTCATTGCGGATTTGTCACAAGATATACCACGACAATAA
Protein
MYEDYSKFIDTFGARLAGSKALEKAIDHMVNLTRQNGLNDVTTEEVDIPYWQRIYESANMFEPYLKKISILGLGTSVSTPAEGIKAEAIVIKSFDELEKTDENKIKGKIVVFDPPFVSYGETVVYRSLGASKASRKGAVATLVRSITPFSIYSLHTGAQDYENNVTKIPTAAITHEDADLFRRLQNLGEKIVLKIHMSYAMSRKISRNTIIDLKGKESPEKQVIVSGHIDSWDVGQGAMDDGGGMMISWFVPVILNILKLKPRRTIRAILWTAEEPGLIGAEAYLTKHINETSNINFIMESDEGTFKPLGLDVAGSTNARCIIAEVLKLFTPIDKMKESEYPGSDMTLFVQKGIPGASLLNENERYFWFHHSEGDTMNVQNQEDVVACAAFWAAFSYVIADLSQDIPRQ

Summary

EMBL
BABH01001228    KZ149946    PZC76765.1    NWSH01002099    PCG69199.1    ODYU01005659    + More
SOQ46741.1    KQ459606    KPI91153.1    KQ460947    KPJ10557.1    JQ653044    AFM38216.1    JTDY01005618    KOB66823.1    JTDY01002866    KOB70573.1    AGBW02014249    OWR42016.1    RSAL01000457    RVE41646.1    KPI91152.1    ODYU01012931    SOQ59473.1    NWSH01007446    PCG62968.1    PZC76763.1    KPJ10556.1    BABH01001213    PCG62969.1    AGBW02010848    OWR47639.1    GEDC01016472    GEDC01000320    JAS20826.1    JAS36978.1    GDIQ01040118    JAN54619.1    GDIP01058450    GDIQ01042768    JAM45265.1    JAN51969.1    GDIP01119543    JAL84171.1    GDIP01122640    GDIQ01061715    JAL81074.1    JAN33022.1    GDIQ01042767    JAN51970.1    GDIQ01141482    GDIP01121438    GDIP01058451    JAL10244.1    JAL82276.1    GDIP01083545    GDIQ01061714    JAM20170.1    JAN33023.1    GDIP01225880    JAI97521.1    GDIP01201994    GDIQ01154770    GDIP01058452    GDIQ01051316    GDIQ01042769    LRGB01000512    JAJ21408.1    JAN51968.1    KZS18795.1    GDIP01060702    JAM43013.1    GDIP01060700    JAM43015.1    GDIP01060701    JAM43014.1    GDIP01225879    JAI97522.1    GDIP01225881    JAI97520.1    GDIQ01059661    JAN35076.1    GBXM01010500    JAH98077.1    GDIQ01151925    JAK99800.1    GDIQ01059662    JAN35075.1    GDIQ01059663    JAN35074.1    GDIP01228085    JAI95316.1    BT126899    AEE61861.1    GDIQ01049919    JAN44818.1    GDIQ01009486    JAN85251.1    GDIQ01232432    JAK19293.1    GDIQ01232434    JAK19291.1    GDIP01102645    JAM01070.1    GDIQ01232433    JAK19292.1    GDIQ01205514    JAK46211.1    GL732642    EFX69094.1    GG666456    EEN69541.1    LJIJ01000168    ODN01176.1    APGK01006246    APGK01006577    KB736835    KB736662    KB631984    ENN83126.1    ENN83167.1    ERL87685.1    CP026243    AWO96874.1    GDIQ01034566    JAN60171.1    HAEF01002000    SBR39382.1    HAEH01000670    HAEI01013854    SBR65343.1    AERX01027706    AERX01027707    AERX01027708    HADZ01007346    SBP71287.1    HAEJ01008279    SBS48736.1    HADY01006971    SBP45456.1    HAEA01007439    SBQ35919.1    GALX01004405    JAB64061.1    QCYY01001532    ROT77368.1    HADW01007091    HADX01011225    SBP08491.1    GCES01156710    JAQ29612.1    BT045870    ACI34132.1    KR068535    AMO02552.1    KQ434850    KZC08566.1    GCES01113519    JAQ72803.1    KU932236    APA33872.1   
Pfam
PF04389   Peptidase_M28        + More
PF02225   PA
Interpro
IPR007484   Peptidase_M28        + More
IPR039866   CPQ       
IPR002052   DNA_methylase_N6_adenine_CS       
IPR003137   PA_domain       
PDB
3IIB     E-value=3.08826e-45,     Score=458

Ontologies

Topology

Length:
409
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.16688
Exp number, first 60 AAs:
1e-05
Total prob of N-in:
0.01346
outside
1  -  409
 
 

Population Genetic Test Statistics

Pi
197.314
Theta
183.768388
Tajima's D
0.227185
CLR
3.001605
CSRT
0.434428278586071
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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