Gene

KWMTBOMO07682

Pre Gene Modal

BGIBMGA000865

Annotation

hypothetical_protein_KGM_09648_[Danaus_plexippus]

Location

Bomo_Chr13(+):4367361-4370022      View in EpiBrowser

Full name

Protein FAM50 homolog      

Location in the cell

Mitochondrial   Reliability : 1.36 Nuclear   Reliability : 2.012

CDS

ATGATGCATTCTATTGTAAAGGCACTATTGATACTAAAAAAGATAAAAAAGAACCCTGATGTGGATACATCGTTTCTACCAGACAGAGAAAGAGAAGAAGCGGATTTGAAATTAAGGGAAGAACTCAGATTGGAATGGGTAATGACACAGGCCAGTCTCAAAGATGAACCAATCACAGTTACATTCAGCTATTGGGATGGATCTGGCCATAGAAGAAATGTTACACTTAAAAAAGGTAATTCCATATACCAATTCTTACAACGGTGCTTAGACGCTCTGAGGCCAGAGTTTAGTGAATTGAAGACAATCTCTGCTGATCAACTAATGTATGTGAAGGAAGATCTTATATTACCACATCACTACACATTCTACGACTTCATTGTTACAAAGGCTAGAGGTAAAAGTGGTCCACTGTTCCAATTTGATGCATCAGATGATGTGAGACTTGTCAATGATGCCACCCAAGAGAAGCAAGACTCGCATGCCGGAAAAGTTTTACTAAGATCTTGGTATGAGAGAAATAAGCACATTTTTCCAGCATCGAGATGGGAGCCATATGACCCAACAAAAACTTATTCGAAATATACTATTAAAGGAAAATAA

Protein

MMHSIVKALLILKKIKKNPDVDTSFLPDREREEADLKLREELRLEWVMTQASLKDEPITVTFSYWDGSGHRRNVTLKKGNSIYQFLQRCLDALRPEFSELKTISADQLMYVKEDLILPHHYTFYDFIVTKARGKSGPLFQFDASDDVRLVNDATQEKQDSHAGKVLLRSWYERNKHIFPASRWEPYDPTKTYSKYTIKGK

Similarity

Belongs to the FAM50 family.

Keywords

Complete proteome   Reference proteome  

Feature

chain  Protein FAM50 homolog

Uniprot

H9IUD5   A0A2W1BT02   A0A2A4JS43   A0A2H1WS75   A0A3S2KZ43   A0A212EKJ5   + More
A0A194QYC6   A0A023FAD6   A0A0V0G9Y7   A0A0A1X172   A0A034W8I2   W8C0S1   A0A1Q3F6X1   A0A0P4VKC3   R4G4R9   A0A0K8VRB3   A0A069DT11   B4N7Y4   B4PR86   B4IGX4   B4QY52   A0A084VG11   Q9VAY7   A0A1W4VL43   B3LUZ9   A0A182J0W4   A0A3B0K0F6   A0A182YAQ2   A0A182R675   A0A182VBI0   A0A182TLS3   A0A182I008   Q299F9   A0A182VZ64   B4G545   Q7PYQ5   A0A182N440   A0A182X0B8   A0A182FST8   A0A2M4ARI8   A0A182K2N4   A0A182SPP4   A0A182M3I1   A0A2M3ZAY6   A0A182QQ05   B0W8P2   A0A2M4CTI8   A0A2M4BSY2   Q16U25   A0A182GPP6   B4KCY3   B3P5W2   A0A0A9YBM2   A0A1B0G884   A0A1A9ZLD2   A0A1A9VQY7   A0A1A9X1C0   A0A1B0BJM1   A0A1B6DD54   A0A1A9XI06   A0A182P560   A0A1V9Y127   A0A023ERH9   A0A0M5J9X1   B4JS04   B4MBK3   A0A2R5L793   A0A194PDP6   A0A293MRV6   A0A3R7M389   A0A170VKZ3   A0A336LM26   A0A2J7QRX7   A0A1I8N283   L7M8M4   T1PIX8   A0A131YPH3   A0A0N7ZCR5   A0A224YYT2   A0A0L0C7H9   A0A1E1X5M9   E0VJ61   S4PWE2   A0A067REY2   B7QFH7   A0A1I8PXL5   A0A1D2N079   A0A1B0CQ99   A0A090X7G0   A0A0B7A2S4   A0A1L8DAQ3   A0A0L8I6H1   E9GK72   A0A1J1J0N9   A0A1B6IES0   A0A1B6MMA3   E9HH81   A0A1B6GAE4   A0A3Q0IPI5   A0A0P5BT30  

Pubmed

19121390    28756777    22118469    26354079    25474469    25830018    + More
25348373    24495485    27129103    26334808    17994087    17550304    24438588    10731132    12537572    12537569    25244985    15632085    12364791    17510324    26483478    25401762    26823975    28327890    24945155    25315136    25576852    26830274    28797301    26108605    28503490    20566863    23622113    24845553    27289101    25970599    21292972   

EMBL

BABH01001247    KZ149946    PZC76774.1    NWSH01000677    PCG74855.1    ODYU01010667    + More
SOQ55929.1    RSAL01000399    RVE41937.1    AGBW02014249    OWR42022.1    KQ460947    KPJ10543.1    GBBI01000753    JAC17959.1    GECL01002039    JAP04085.1    GBXI01009767    JAD04525.1    GAKP01008345    JAC50607.1    GAMC01003867    JAC02689.1    GFDL01011782    JAV23263.1    GDKW01001078    JAI55517.1    ACPB03000243    GAHY01000536    JAA76974.1    GDHF01011199    JAI41115.1    GBGD01002087    JAC86802.1    CH964232    EDW81235.1    CM000160    EDW98450.1    CH480837    EDW49092.1    CM000364    EDX14700.1    ATLV01012594    KE524806    KFB36905.1    AE014297    AY113617    CH902617    EDV42471.1    OUUW01000013    SPP87774.1    APCN01002029    CM000070    CH479179    EDW24711.1    AAAB01008987    GGFK01010063    MBW43384.1    AXCM01005075    GGFM01004910    MBW25661.1    AXCN02000024    DS231859    EDS39092.1    GGFL01004488    MBW68666.1    GGFJ01006737    MBW55878.1    CH477634    JXUM01015393    KQ560428    KXJ82468.1    CH933806    EDW17005.1    CH954182    EDV53362.1    GBHO01015111    GBRD01011806    GDHC01017828    GDHC01006077    JAG28493.1    JAG54018.1    JAQ00801.1    JAQ12552.1    CCAG010000200    JXJN01015465    GEDC01013671    JAS23627.1    MNPL01001112    OQR79439.1    GAPW01002327    JAC11271.1    CP012526    ALC47786.1    CH916373    EDV94544.1    CH940656    EDW58474.1    GGLE01001216    MBY05342.1    KQ459606    KPI91138.1    GFWV01018846    MAA43574.1    QCYY01002267    ROT71670.1    GEMB01006594    JAR96752.1    UFQS01000052    UFQT01000052    SSW98650.1    SSX19036.1    NEVH01011882    PNF31338.1    GACK01005521    JAA59513.1    KA648762    AFP63391.1    GEDV01007394    JAP81163.1    GDRN01061665    JAI65184.1    GFPF01010949    MAA22095.1    JRES01000809    KNC28235.1    GFAC01004633    JAT94555.1    DS235219    EEB13417.1    GAIX01006943    JAA85617.1    KK852730    KDR17516.1    ABJB010215864    ABJB010910935    DS925894    EEC17599.1    LJIJ01000336    ODM98679.1    AJWK01023284    GBIH01002743    JAC91967.1    HACG01028042    HACG01028043    HACG01028044    CEK74907.1    CEK74908.1    CEK74909.1    GFDF01010545    JAV03539.1    KQ416408    KOF97062.1    GL732549    EFX79938.1    CVRI01000066    CRL06021.1    GECU01022267    JAS85439.1    GEBQ01002900    JAT37077.1    GL732646    EFX68911.1    GECZ01010361    JAS59408.1    GDIP01180488    GDIP01150054    GDIQ01253454    GDIQ01106948    GDIP01127356    GDIP01079259    JAJ42914.1    JAJ98270.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000007151    UP000053240    UP000015103    + More
UP000007798    UP000002282    UP000001292    UP000000304    UP000030765    UP000000803    UP000192221    UP000007801    UP000075880    UP000268350    UP000076408    UP000075900    UP000075903    UP000075902    UP000075840    UP000001819    UP000075920    UP000008744    UP000007062    UP000075884    UP000076407    UP000069272    UP000075881    UP000075901    UP000075883    UP000075886    UP000002320    UP000008820    UP000069940    UP000249989    UP000009192    UP000008711    UP000092444    UP000092445    UP000078200    UP000091820    UP000092460    UP000092443    UP000075885    UP000192247    UP000092553    UP000001070    UP000008792    UP000053268    UP000283509    UP000235965    UP000095301    UP000037069    UP000009046    UP000027135    UP000001555    UP000095300    UP000094527    UP000092461    UP000053454    UP000000305    UP000183832    UP000079169   

PRIDE

H9IUD5    Q9VAY7   

Pfam

PF04921   XAP5

Interpro

IPR007005   XAP5       

ProteinModelPortal

H9IUD5   A0A2W1BT02   A0A2A4JS43   A0A2H1WS75   A0A3S2KZ43   A0A212EKJ5   + More
A0A194QYC6   A0A023FAD6   A0A0V0G9Y7   A0A0A1X172   A0A034W8I2   W8C0S1   A0A1Q3F6X1   A0A0P4VKC3   R4G4R9   A0A0K8VRB3   A0A069DT11   B4N7Y4   B4PR86   B4IGX4   B4QY52   A0A084VG11   Q9VAY7   A0A1W4VL43   B3LUZ9   A0A182J0W4   A0A3B0K0F6   A0A182YAQ2   A0A182R675   A0A182VBI0   A0A182TLS3   A0A182I008   Q299F9   A0A182VZ64   B4G545   Q7PYQ5   A0A182N440   A0A182X0B8   A0A182FST8   A0A2M4ARI8   A0A182K2N4   A0A182SPP4   A0A182M3I1   A0A2M3ZAY6   A0A182QQ05   B0W8P2   A0A2M4CTI8   A0A2M4BSY2   Q16U25   A0A182GPP6   B4KCY3   B3P5W2   A0A0A9YBM2   A0A1B0G884   A0A1A9ZLD2   A0A1A9VQY7   A0A1A9X1C0   A0A1B0BJM1   A0A1B6DD54   A0A1A9XI06   A0A182P560   A0A1V9Y127   A0A023ERH9   A0A0M5J9X1   B4JS04   B4MBK3   A0A2R5L793   A0A194PDP6   A0A293MRV6   A0A3R7M389   A0A170VKZ3   A0A336LM26   A0A2J7QRX7   A0A1I8N283   L7M8M4   T1PIX8   A0A131YPH3   A0A0N7ZCR5   A0A224YYT2   A0A0L0C7H9   A0A1E1X5M9   E0VJ61   S4PWE2   A0A067REY2   B7QFH7   A0A1I8PXL5   A0A1D2N079   A0A1B0CQ99   A0A090X7G0   A0A0B7A2S4   A0A1L8DAQ3   A0A0L8I6H1   E9GK72   A0A1J1J0N9   A0A1B6IES0   A0A1B6MMA3   E9HH81   A0A1B6GAE4   A0A3Q0IPI5   A0A0P5BT30  

KEGG

101745385    K13119 protein FAM50 | (RefSeq) protein FAM50 homolog

GO

GO:0005634   GO:0003723   GO:0005654   GO:0005524   GO:0007018   GO:0008017   GO:0004402   GO:0016573   GO:0008270   GO:0022891   GO:0003707   GO:0051537  

PANTHER

PTHR12722  

Length:

200

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00014

Exp number, first 60 AAs:

0

Total prob of N-in:

0.06502

outside

1  -  200

 

 

Pi

143.475702

Theta

125.581368

Tajima's D

0.450569

CLR

0

CSRT

0.503874806259687

Interpretation

Uncertain