Gene

KWMTBOMO07678

Pre Gene Modal

BGIBMGA001282

Annotation

PREDICTED:_gem-associated_protein_5-like_[Bombyx_mori]

Location

Bomo_Chr13(-):4344082-4349110      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.388

CDS

ATGTTTGAAAAGTATGGACTGAAATCATCCACGAGTCCGTTCACTATCGAGAGAGTCCAGGCTAGTTCAGGCGAGAATATAAAATGCGATGGAGTAGACAATGGACTTAATAGCGAAATAATAGAAGAAAACAAGGGTAAAGACTACGGTGCCGATTTCATTAAAATATTCGGAACTATTCAGGAAGTTAACGAGGTCTTAGATAAGGAACAAACACGTCATTTAGAATTGTCCAATATTGAATCATGGATGATGCTGTCGATATTCCGGGGGCACATCGACGCCACCATACAATACGCAAGCCAAAACGATTTGCTCTGTCCGTATCTACTTAGTTTGACGCCTTGCGTCTCGCTCAAGTACTGGAAGGATGCCACACAATTATATTTAGCACAAATAGATCGACTGGTAGCGAAGACTGAAGGTCATAAACTATATGAGAACAAGTACTACGGCGGGCCGGTGTACCGCAAGGCGCTCACGCGGCTGAGCACGCACGACGTGCGGGGCGCCGTCGCGACACTCGCAGAAAACAAACTATACAAAGAAGCATACGTCCTTTGTCGTGTCAGGTACATGGACAGCATTGCAACACAAATTCTGCACCAATGGGCAAATTACTCCAACCTTTGCGGGAATTTTGAAATAGCCACAGTTTGTTTTATTGCTTTAGGAGATTTATCCGAAGCAGCCACGGTGCTCGCGAAGTCAAAGAAACAAGAAAACTTGTGTTTAGCAGCGGAAATAGCTAAGGCAGCCGGTCGGGCCACTCTAGCTGATCACATCGAGAAAAAGGCACAAAACACAATCCCATCAACTTCAGATGAAACTGAAGAAATTTTGAAAGAACTCCCCACTAAAATGGAATTGCTTTTAAAGCAAAACAATAATTCAGAAGATAAGGCAGTGAATTCGGAAGACGAAGAGCCGGTTGGAAACTTAGTTGAGTAA

Protein

MFEKYGLKSSTSPFTIERVQASSGENIKCDGVDNGLNSEIIEENKGKDYGADFIKIFGTIQEVNEVLDKEQTRHLELSNIESWMMLSIFRGHIDATIQYASQNDLLCPYLLSLTPCVSLKYWKDATQLYLAQIDRLVAKTEGHKLYENKYYGGPVYRKALTRLSTHDVRGAVATLAENKLYKEAYVLCRVRYMDSIATQILHQWANYSNLCGNFEIATVCFIALGDLSEAATVLAKSKKQENLCLAAEIAKAAGRATLADHIEKKAQNTIPSTSDETEEILKELPTKMELLLKQNNNSEDKAVNSEDEEPVGNLVE

Uniprot

H9IVK2   A0A2W1BC10   A0A2A4JTS7   A0A3S2LFK8   A0A2H1WS83   S4P6F0   + More
A0A194PD27   A0A212EKL3   A0A1E1W245   A0A0T6AWQ1   D1ZZV0   E9GIU0   A0A1Y1ML03   A0A0M8ZSJ0   A0A0L7R2T8   A0A369RXN1   A0A1B6KN85   A0A1B6L1G8   A0A3B4X8G8   A0A3B4XQ96   A0A1B6KHJ3   A0A1B6KJF9   A0A088A7B4   A0A067QIC9   E2B371   A0A310SU74   A0A3S2MPS3   A0A2A3ECB7   A0A3Q3NI55   A0A3Q1JWM0   A0A1B6I6L3   A0A3B3CUC8   A0A3Q2VLI6   A0A1S3RKC1   A0A3B5A927   R7TDD7   A0A3Q3WYD6   A0A3B4G7R7   A0A3B4G445   A0A3P8R5J5   A0A3P9C232   A0A3P8R4G4   W5UJZ1   A0A060W7D2   A0A3Q2GQA7   W5KHC4   I3KHW2   I3KHW3   I3KHW1  

Pubmed

19121390    28756777    23622113    26354079    22118469    18362917    + More
19820115    21292972    28004739    30042472    24845553    20798317    29451363    23254933    25186727    23127152    24755649    25329095   

EMBL

BABH01001248    BABH01001249    BABH01001250    KZ150544    PZC70566.1    NWSH01000677    + More
PCG74873.1    RSAL01000155    RVE45644.1    ODYU01010667    SOQ55930.1    GAIX01005069    JAA87491.1    KQ459606    KPI91137.1    AGBW02014249    OWR42023.1    GDQN01009998    JAT81056.1    LJIG01022727    KRT79031.1    KQ971338    EFA02425.1    GL732547    EFX80325.1    GEZM01031052    JAV85085.1    KQ435918    KOX68733.1    KQ414664    KOC65192.1    NOWV01000140    RDD39300.1    GEBQ01027077    JAT12900.1    GEBQ01022603    JAT17374.1    GEBQ01029040    JAT10937.1    GEBQ01028394    JAT11583.1    KK853320    KDR08548.1    GL445305    EFN89853.1    KQ759878    OAD62256.1    CM012450    RVE64245.1    KZ288296    PBC28932.1    GECU01025130    JAS82576.1    AMQN01003246    KB311324    ELT89502.1    JT417375    AHH42362.1    FR904431    CDQ63198.1    AERX01032421   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053268    UP000007151    UP000007266    + More
UP000000305    UP000053105    UP000053825    UP000253843    UP000261360    UP000005203    UP000027135    UP000008237    UP000242457    UP000261640    UP000265040    UP000261560    UP000264840    UP000087266    UP000261400    UP000014760    UP000261620    UP000261460    UP000265100    UP000265160    UP000221080    UP000193380    UP000265020    UP000018467    UP000005207   

PRIDE

H9IVK2   

Pfam

PF00400   WD40        + More
PF12894   ANAPC4_WD40

Interpro

IPR019775   WD40_repeat_CS        + More
IPR036322   WD40_repeat_dom_sf       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR017986   WD40_repeat_dom       
IPR001680   WD40_repeat       
IPR011047   Quinoprotein_ADH-like_supfam       
IPR020472   G-protein_beta_WD-40_rep       
IPR024977   Apc4_WD40_dom       
IPR018247   EF_Hand_1_Ca_BS       
IPR011990   TPR-like_helical_dom_sf       
IPR007110   Ig-like_dom       
IPR011045   N2O_reductase_N       

SUPFAM

SSF50978   SSF50978        + More
SSF50998   SSF50998       
SSF48452   SSF48452       
SSF50974   SSF50974       

Gene 3D

2.130.10.10    

ProteinModelPortal

H9IVK2   A0A2W1BC10   A0A2A4JTS7   A0A3S2LFK8   A0A2H1WS83   S4P6F0   + More
A0A194PD27   A0A212EKL3   A0A1E1W245   A0A0T6AWQ1   D1ZZV0   E9GIU0   A0A1Y1ML03   A0A0M8ZSJ0   A0A0L7R2T8   A0A369RXN1   A0A1B6KN85   A0A1B6L1G8   A0A3B4X8G8   A0A3B4XQ96   A0A1B6KHJ3   A0A1B6KJF9   A0A088A7B4   A0A067QIC9   E2B371   A0A310SU74   A0A3S2MPS3   A0A2A3ECB7   A0A3Q3NI55   A0A3Q1JWM0   A0A1B6I6L3   A0A3B3CUC8   A0A3Q2VLI6   A0A1S3RKC1   A0A3B5A927   R7TDD7   A0A3Q3WYD6   A0A3B4G7R7   A0A3B4G445   A0A3P8R5J5   A0A3P9C232   A0A3P8R4G4   W5UJZ1   A0A060W7D2   A0A3Q2GQA7   W5KHC4   I3KHW2   I3KHW3   I3KHW1  

KEGG

101743080    K13133 gem associated protein 5 | (RefSeq) gem-associated protein 5-like

GO

GO:0030217  

Length:

316

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02139

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01325

outside

1  -  316

 

 

Pi

306.6956

Theta

193.668514

Tajima's D

2.1228

CLR

0.080729

CSRT

0.900804959752012

Interpretation

Uncertain