SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07661
Pre Gene Modal
BGIBMGA001288
Annotation
PREDICTED:_LOW_QUALITY_PROTEIN:_nose_resistant_to_fluoxetine_protein_6-like_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.834
 

Sequence

CDS
ATGGCGTCGCGCGCATGCGGTTTGATACTCACACTGTTCACCAGCGCGGTACTGTCGCGGGACTGCATCGAACTAACCATCAGCGACAAAAGAATCATAACAGAAACAATTCTAAATAGTACCATATTAAAGTTCCAACACGAGAATGATACGGTCGTTGAGAGTTCCCGGTTTAATATTGTGCAGTTGTGGGAGAGATTCCCGAAGGTTGTTGTGCCTAGGAACGGTACTAGTGAACAGTGCAGGAGAGACAGCCAGCTGTATATGGACAGTTTGGACCGACTGGAGTTATGGGCTTTGAAAATGTTTGACGCAACGGCCAAGCCCCCGTCTGGCATACTGAGCGGCAATGGAAACCAATATGGCGACTTTGACGAATGTCTGAGCATCGACGCCGCTGTCCGAGGGAAGTACTGCCTTGCCTCACTCATCATCAACTTCGGGGATGAGCAGAAATATAAAAAATTGGACTATCTCATTCACAGCGGACATTATATCAGGAGTAATATTACAGATATGGGTCACAGAGTTCCGCGGTATTCCAGTCTGCTTTGGGGCATCTGCATCCCAAGCTCGTGCAGTAGCTTCGACCTGGAAGAGGAGCTGTCGTACCGTCTATCACATCTCGGCATCACAGCCAAAGTACACAACACTATGTGCACAGTGAAGAATGTTAAACGTCCTTATTCGTTTGGGAAAGCCTTGTCCATATCTTTCTTCTTAGCGATACTGCTACTGTTAAGTCTTGGAACTATTTTGGACGACGACAAAGATGGCGTGACAAATTTCGAGAAACTACTTAACGCTTTTTCGTTGAAGCGTAATCTGAGGAAAGTGTTTGATCTGTCCGACGCAGCGACTAGGGTCAAAGGAGTGGACGCATTCAGGGGTATCAATGCCCTTGCTTTGCTCGTTGCGCATAAGTCAATGGCCATGGCGCATAACCCTTACGTTAACAAAGTTAGCTTCTCTGAGGTATTCGGAATGCCGTGGGCTGTGATCGGTCGCTCAGCGATACTATACACAGACAGTTTCCTGTACCTCAGTGGGTTCCTGAACGCTTACAACCTCCTGCAAGAGCTCGAGAGGAAAGGCACGATCGACTTGAAGAGCAGGCTCATCAACCGATGGTTTAGGTTATTTCCGTTGTTCGTGAGCCTGATGTTGTTCTGCACGTACATCCTGCCTGACATCAGCAACGGACCCCAGTGGAACCTCGTCGTGGAAGAGCACAGCAGAGTCTGCGAGAAGAACATGTGGAAGAGCTTCCTTTTCATTCACAACTATTTTGGATTCGAGGAAATGTGTCTGACGCACACGCATCAGATCGGTATGGACATGCAGCTGTACGTAGCGACCTTGCCTCTGATGCTTCTGTTCTGGAAAGCCAGGACCATTGGCTGGACCGTCTTCGCCTCCATCGCCGTCGGCTCCACTGTACTCAGATATCTTGCCATCCACTGGTACGACATCAGCATGTTCGTCTACTACGGAATATCAGTCCAGAAGTTACTGGACGCAGCAAGATATTCTTATATTCTGCCGACTCACAGAGCAACCATTTACCTAATCGGAGTAGCGATGGCCTACGTCATTAGAACGAAGAAATTGAACTTTACTCTCTCAAATAGCCAAGTAAGACTATTCTGGGCTTCGTGTTTCGCGTTAGCCGCCTTCACCATAGTGCACCCGTACTGGATGGGTCTGGAGGGGTACCAGTACGAGCACGGACCCGCCGCTCTGTTCGCGGCCCTGTCCCCTATCATGTGGGGCTTGTTCATGTGCATGATGCACTGGGCCGTGTGTAATGATTACGCTGGTTCTGGCACCGCCTTCCTGGAGTCGAGAGTGTTCAAATTCTTCAACAAAATCGCGTACAGTGTATACCTGACCCAGTTCCCGATCTTCTTCTTCACGGTCGGAGTCCAGAGGCACGCGGAATACTACTCGCCATTACTTCTGTTCCACATACCGGAGATGTTCGCAATCTTTGCGATATCCATAATGACGACAGTGGCCATCGAAATGCCCTTCAATCAAGTTTACAGGATATATTTCGGGAAATCACAGACGAAATTAAAAGAAAATTGA
Protein
MASRACGLILTLFTSAVLSRDCIELTISDKRIITETILNSTILKFQHENDTVVESSRFNIVQLWERFPKVVVPRNGTSEQCRRDSQLYMDSLDRLELWALKMFDATAKPPSGILSGNGNQYGDFDECLSIDAAVRGKYCLASLIINFGDEQKYKKLDYLIHSGHYIRSNITDMGHRVPRYSSLLWGICIPSSCSSFDLEEELSYRLSHLGITAKVHNTMCTVKNVKRPYSFGKALSISFFLAILLLLSLGTILDDDKDGVTNFEKLLNAFSLKRNLRKVFDLSDAATRVKGVDAFRGINALALLVAHKSMAMAHNPYVNKVSFSEVFGMPWAVIGRSAILYTDSFLYLSGFLNAYNLLQELERKGTIDLKSRLINRWFRLFPLFVSLMLFCTYILPDISNGPQWNLVVEEHSRVCEKNMWKSFLFIHNYFGFEEMCLTHTHQIGMDMQLYVATLPLMLLFWKARTIGWTVFASIAVGSTVLRYLAIHWYDISMFVYYGISVQKLLDAARYSYILPTHRATIYLIGVAMAYVIRTKKLNFTLSNSQVRLFWASCFALAAFTIVHPYWMGLEGYQYEHGPAALFAALSPIMWGLFMCMMHWAVCNDYAGSGTAFLESRVFKFFNKIAYSVYLTQFPIFFFTVGVQRHAEYYSPLLLFHIPEMFAIFAISIMTTVAIEMPFNQVYRIYFGKSQTKLKEN

Summary

EMBL
NWSH01003083    PCG66978.1    GAIX01014041    JAA78519.1    RSAL01000275    RVE43115.1    + More
KQ459606    KPI91120.1    ODYU01000488    SOQ35353.1    JTDY01002971    KOB70394.1    KK852566    KDR21234.1    NEVH01020335    PNF21733.1    PNF21734.1    KQ979863    KYN18772.1    GFXV01006990    MBW18795.1    KQ977873    KYM99147.1    GBYB01013028    GBYB01013029    JAG82795.1    JAG82796.1    KQ981727    KYN37116.1    KQ983211    KYQ46623.1    ABLF02017170    ABLF02028298    KQ976396    KYM92835.1    GECZ01018848    JAS50921.1    NNAY01000843    OXU26238.1    KZ288387    PBC26430.1    GL445285    EFN89881.1    DS235169    EEB12792.1    GL435766    EFN72620.1    GDHC01013884    JAQ04745.1    KQ971343    EFA04173.1    KK107468    EZA50205.1    QOIP01000001    RLU26672.1    KQ435719    KOX78937.1    KQ414740    KOC62037.1    GL888463    EGI60662.1    GBXI01007863    JAD06429.1    CH954180    EDV47046.1    CM000162    EDX01740.1    GAKP01013466    JAC45486.1    CH480847    EDW51080.1    GDHF01025619    JAI26695.1    GAMC01013666    GAMC01013665    JAB92889.1    GDHF01010821    JAI41493.1    AE014298    BT021240    AAN09655.2    AAX33388.1    ACPB03019813    GEDC01029819    JAS07479.1    CH902622    EDV34271.1    GBXI01007102    JAD07190.1    KQ764286    OAD54557.1    NEVH01015308    PNF27022.1    UFQS01000048    UFQT01000048    SSW98567.1    SSX18953.1    CH479207    EDW30971.1    JRES01000926    KNC27239.1    OUUW01000003    SPP78822.1    GEZM01009745    JAV94345.1    CH963925    EDW78414.2    KQ434950    KZC12506.1    GFDL01005066    JAV29979.1    GFDL01005046    JAV29999.1    GFDL01005060    JAV29985.1    CP012528    ALC49761.1    GFDL01005088    JAV29957.1    KK852657    KDR19201.1    DS232076    EDS34051.1    CH916371    EDV91949.1    CH933811    EDW06368.2    CH983974    EDX16612.1    CH477218    EAT47422.1    AXCN02001441    AAAB01008847    EDO64293.2    CH940655    EDW66165.1    AXCM01000689    GGMS01004946    MBY74149.1    SPP78823.1    GEBQ01027792    GEBQ01015188    JAT12185.1    JAT24789.1    KB632279    ERL91294.1    ADMH02000751    ETN65172.1    PYGN01000081    PSN54851.1    ATLV01015148    KE525003    KFB40132.1    UFQT01003846    SSX35311.1    DS235172    EEB12974.1    AJVK01002152   
Pfam
PF01757   Acyl_transf_3
Interpro
IPR002656   Acyl_transf_3        + More
IPR006621   Nose-resist-to-fluoxetine_N       

Ontologies

Topology

SignalP
Position:   1 - 19,         Likelihood:  0.922798
 
 
Length:
696
Number of predicted TMHs:
10
Exp number of AAs in TMHs:
214.96245
Exp number, first 60 AAs:
0.19081
Total prob of N-in:
0.90621
inside
1  -  230
TMhelix
231  -  253
outside
254  -  337
TMhelix
338  -  357
inside
358  -  376
TMhelix
377  -  396
outside
397  -  437
TMhelix
438  -  460
inside
461  -  466
TMhelix
467  -  489
outside
490  -  513
TMhelix
514  -  533
inside
534  -  545
TMhelix
546  -  568
outside
569  -  577
TMhelix
578  -  600
inside
601  -  619
TMhelix
620  -  642
outside
643  -  651
TMhelix
652  -  674
inside
675  -  696
 
 

Population Genetic Test Statistics

Pi
204.728776
Theta
161.503492
Tajima's D
1.028294
CLR
0.344324
CSRT
0.663766811659417
Interpretation
Uncertain
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