Gene

KWMTBOMO07657

Pre Gene Modal

BGIBMGA001291

Annotation

PREDICTED:_iduronate_2-sulfatase_[Bombyx_mori]

Location

Bomo_Chr13(-):3270847-3274615      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.562 Nuclear   Reliability : 1.008

CDS

ATGCAGAGGCTCACAATGATTTATGTCGTAAATATAATATTGTTGAATGGTGATCGTGTACTTACAAGTGACGTAGAAACACCGAAAAATATCCTGTTTATTTTGATTGACGATTTGCGCCATCTCTCGGACAAAAAAGTTTATTTGCCTAACATCAACTTCTTAGGAAAAACTGGTGCTACCTTTAATAATGCGTTCGCTCAACAAGCCTTATGTGCGCCCAGTCGTAATTCCCTTCTAACAGGTCGTAGGCCCGACTCGCTTCGCTTGTACGACTTCTACAGCTACTGGCGCGATCGCAGTAACGGACAAGGGAATTTCACAACCATACCACAGTTCTTCAAAGAGCATGGATACGATACTTACTCCGTGGGAAAAGTGTTCCATCCTGGAAAAAGTTCGAACTTCACAGACGATTACCCGTACAGCTGGTCGGAGTATCCGTATCATCCCCCGACAGAAATGTACAAAGACGCTAAAGTGTGTCGAAATAAAAAAACGAAAAAACTAGAGAGAAATCTAATTTGTCCAGTTTCTGTTAAAAGACAACCAGGACAATCTCTACCAGACTTGCAGTCGTTGGATTACGCTATTGATTTCCTGAAAAAGAGAAACGGGAGTAAGCCGTTTTTCTTAGCAATCGGATTTCACAAGCCGCATATACCATTGAAGTTTCCAAAGGAATATTTAAAACAAATGCCAATTAGCAAAGTGCATAGACCTAAAGAACCGAACATTCCCAAGGACATGCCTTTGGTGTCCTGGCACCCGTGGACGGACGTACGGAAACGCGATGACATTCGCCGCTTAAACATCACATTTCCTTTCGGCGTGATGCCCACTAAATGGACGTTGAAGATACGGCAGAGTTACTACGCGGCGGCTTTGTACATTGACGAATTGATTGGGATCCTGTTAAGCTATGTGGACATGCAGAAAACTATAATTGTACTGACAAGTGATCATGGTTGGTCACTCGGCGAAAACGGACTTTGGGCAAAATACAGTAACTTCGATTACGCTCTTAAAGTTCCATTAATATTCAAATCTCCCAAACTGATTCCAACTGTTGTCCATGAACCAGTCGAATTAATAGACATTTTCCCGACCCTGGTTGATCTTACCAAATTATCTGACGAAATACCCAAATGTCTGAACCACAAAGACACGTCACAGCTTTGTTTCGAAGGAAAAAGTTTAGTTCCTTTCATTGAAAATAATAGTAATGGACTTGAAGCTTTTGCAATAAGTCAGTGCCCGCGACCGAGTGTGTATCCGCAGAAAAATTCGGACAAACCACGTTTGAAGGACATCACTATTATGGGTTACAGCATCAGAACGAAAAGATACAGATACACAGAATGGATATCGTTTAATAACACGCTCTTTACAAAAAATTGGAACAATAATTATGGCATAGAACTGTACGATCACATTATTGATCCAATCGAATCTAAAAACTTATTTTTGGTCTCAAAATACAAAAATATTGCAAAGGTCTTATCTATACGATTAAGATCTAGTGTTTATGTCATTGTTTAA

Protein

MQRLTMIYVVNIILLNGDRVLTSDVETPKNILFILIDDLRHLSDKKVYLPNINFLGKTGATFNNAFAQQALCAPSRNSLLTGRRPDSLRLYDFYSYWRDRSNGQGNFTTIPQFFKEHGYDTYSVGKVFHPGKSSNFTDDYPYSWSEYPYHPPTEMYKDAKVCRNKKTKKLERNLICPVSVKRQPGQSLPDLQSLDYAIDFLKKRNGSKPFFLAIGFHKPHIPLKFPKEYLKQMPISKVHRPKEPNIPKDMPLVSWHPWTDVRKRDDIRRLNITFPFGVMPTKWTLKIRQSYYAAALYIDELIGILLSYVDMQKTIIVLTSDHGWSLGENGLWAKYSNFDYALKVPLIFKSPKLIPTVVHEPVELIDIFPTLVDLTKLSDEIPKCLNHKDTSQLCFEGKSLVPFIENNSNGLEAFAISQCPRPSVYPQKNSDKPRLKDITIMGYSIRTKRYRYTEWISFNNTLFTKNWNNNYGIELYDHIIDPIESKNLFLVSKYKNIAKVLSIRLRSSVYVIV

Uniprot

H9IVL1   A0A2H1VA53   A0A194PCT6   A0A212ESD8   A0A0L7LHC0   A0A2A4K7B3   + More
A0A194QYA5   A0A1B0C9E5   D6WDU1   A0A182QHX5   A0A182NJQ6   A0A1B0DI78   A0A1Y1KM57   A0A1B6MUH9   A0A182Y253   A0A182WKZ7   A0A2J7Q121   B0WCM5   A0A067RAA8   Q1WJM2   E0W0K2   A0A146LCA1   A0A182L376   A0A182LRM1   A0A182XMK9   Q7Q6L4   A0A1Q3FMZ0   A0A1Q3FMT6   A0A182VAD6   Q1WJL8   A0A182HWG8   A0A182JEH9   A0A1W7R8L7   A0A084WJP8   A0A1I8MGT1   A0A182RN00   A0A182JRP6   N6U729   A0A0L0BMP7   W5J2U8   A0A336M9N0   A0A1Q3FMK0   A0A1S4EZP7   A0A182FHV0   A0A1A9VHE0   A0A1I8QFC1   A8WGX6   B4KZK8   B4LF09   B3M833   A0A1L8F7I5   H3AV81   A0A1B0FKZ6   A0A0A9XN97   A0A1A9Z969   Q29DQ4   B4H781   A0A3P9I2L1   B4K2U7   B4J3H2   A0A3Q3JMH7   A0A1A9XSE5   A0A3P9I2T9   A0A1A9WG07   B4PGQ4   A0A3P9LF10   A0A3B0JYU9   A0A3Q1J2T4   A0A3Q3JEU1   A0A3P9MM54   A0A1B0BIL6   A0A091RKS9   A0A3Q3JFE8   V9KJ45   A0A3B3CCB1   A0A3Q3JML2   V9KIC9   H2LZB9   A0A034WLL5   A0A2J7Q126   A0A091KK97   A0A3P8QQG2   A0A3P8QS74   A0A1W4VP74   H0Z2M6   A0A3P9BBD6   A0A3Q2YP10   K7J123   A0A091VRR3   B5RJ62   Q4V5Y6   Q9VZP8   Q4V5R8   B4HTR6   B4QPI8   A0A3B4ENN1   A0A091J449   A0A0K8V4K8   A0A0M3QVF8   A0A3S3PJX6  

Pubmed

19121390    26354079    22118469    26227816    18362917    19820115    + More
28004739    25244985    24845553    16606844    20566863    26823975    20966253    12364791    14747013    17210077    24438588    25315136    23537049    26108605    20920257    23761445    17510324    20431018    17994087    27762356    9215903    25401762    15632085    17554307    17550304    24402279    29451363    25348373    20360741    25186727    20075255    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    22936249   

EMBL

BABH01001346    ODYU01001210    SOQ37114.1    KQ459606    KPI91116.1    AGBW02012839    + More
OWR44364.1    JTDY01001137    KOB74764.1    NWSH01000056    PCG80127.1    KQ460947    KPJ10523.1    AJWK01002262    KQ971323    EFA00827.1    AXCN02000515    AJVK01062130    GEZM01081385    GEZM01081383    JAV61668.1    GEBQ01000409    JAT39568.1    NEVH01019960    PNF22275.1    DS231889    EDS43676.1    KK852782    KDR16620.1    DQ230893    ABD94312.1    DS235860    EEB19158.1    GDHC01013340    JAQ05289.1    AXCM01004096    AAAB01008960    EAA11898.4    GFDL01006147    JAV28898.1    GFDL01006146    JAV28899.1    DQ230896    ABD94316.1    APCN01001491    GEHC01000175    JAV47470.1    ATLV01024046    KE525348    KFB50442.1    APGK01046894    APGK01046895    KB741069    KB632402    ENN74397.1    ERL94938.1    JRES01001646    KNC21208.1    ADMH02002165    ETN58116.1    UFQT01000765    SSX27052.1    GFDL01006293    JAV28752.1    AAMC01035134    BC154891    AAI54892.1    CH933809    EDW17935.2    CH940647    EDW69178.2    CH902618    EDV39941.1    CM004480    OCT67552.1    AFYH01036636    AFYH01036637    CCAG010008634    GBHO01021417    JAG22187.1    CH379070    EAL30360.2    CH479217    EDW33687.1    CH920042    EDV90423.1    CH916366    EDV96174.1    CM000159    EDW93272.1    OUUW01000012    SPP87224.1    JXJN01014988    KK801572    KFQ29142.1    JW865475    AFO97992.1    JW865181    AFO97698.1    GAKP01003735    JAC55217.1    PNF22276.1    KK743840    KFP39600.1    ABQF01018676    ABQF01018677    ABQF01018678    ABQF01018679    ABQF01018680    ABQF01018681    ABQF01018682    ABQF01018683    KL411262    KFR05198.1    BT044336    ACH92401.1    BT022520    AAY54936.1    AE014296    AAF47771.1    BT022588    AAY55004.1    CH480817    EDW50337.1    CM000363    CM002912    EDX09081.1    KMY97361.1    KL218558    KFP06586.1    GDHF01028953    GDHF01027423    GDHF01018452    JAI23361.1    JAI24891.1    JAI33862.1    CP012524    ALC42303.1    NCKU01001010    NCKU01000827    NCKU01000817    RWS13367.1    RWS13996.1    RWS14036.1   

Proteomes

UP000005204    UP000053268    UP000007151    UP000037510    UP000218220    UP000053240    + More
UP000092461    UP000007266    UP000075886    UP000075884    UP000092462    UP000076408    UP000075920    UP000235965    UP000002320    UP000027135    UP000009046    UP000075882    UP000075883    UP000076407    UP000007062    UP000075903    UP000075840    UP000075880    UP000030765    UP000095301    UP000075900    UP000075881    UP000019118    UP000030742    UP000037069    UP000000673    UP000069272    UP000078200    UP000095300    UP000008143    UP000009192    UP000008792    UP000007801    UP000186698    UP000008672    UP000092444    UP000092445    UP000001819    UP000008744    UP000265200    UP000001070    UP000261600    UP000092443    UP000091820    UP000002282    UP000265180    UP000268350    UP000265040    UP000092460    UP000261560    UP000001038    UP000265100    UP000192221    UP000007754    UP000265160    UP000264820    UP000002358    UP000053283    UP000000803    UP000001292    UP000000304    UP000261460    UP000054308    UP000092553    UP000285301   

PRIDE

H9IVL1    Q4V5Y6    Q9VZP8    Q4V5R8   

Pfam

PF00884   Sulfatase        + More
PF02210   Laminin_G_2
PF00054   Laminin_G_1

Interpro

IPR024607   Sulfatase_CS        + More
IPR000917   Sulfatase_N       
IPR017850   Alkaline_phosphatase_core_sf       
IPR035874   IDS       
IPR013032   EGF-like_CS       
IPR000742   EGF-like_dom       
IPR001791   Laminin_G       
IPR001881   EGF-like_Ca-bd_dom       
IPR013320   ConA-like_dom_sf       

SUPFAM

SSF53649   SSF53649        + More
SSF49899   SSF49899       

Gene 3D

3.40.720.10    

CDD

cd16030  iduronate-2-sulfatase

ProteinModelPortal

H9IVL1   A0A2H1VA53   A0A194PCT6   A0A212ESD8   A0A0L7LHC0   A0A2A4K7B3   + More
A0A194QYA5   A0A1B0C9E5   D6WDU1   A0A182QHX5   A0A182NJQ6   A0A1B0DI78   A0A1Y1KM57   A0A1B6MUH9   A0A182Y253   A0A182WKZ7   A0A2J7Q121   B0WCM5   A0A067RAA8   Q1WJM2   E0W0K2   A0A146LCA1   A0A182L376   A0A182LRM1   A0A182XMK9   Q7Q6L4   A0A1Q3FMZ0   A0A1Q3FMT6   A0A182VAD6   Q1WJL8   A0A182HWG8   A0A182JEH9   A0A1W7R8L7   A0A084WJP8   A0A1I8MGT1   A0A182RN00   A0A182JRP6   N6U729   A0A0L0BMP7   W5J2U8   A0A336M9N0   A0A1Q3FMK0   A0A1S4EZP7   A0A182FHV0   A0A1A9VHE0   A0A1I8QFC1   A8WGX6   B4KZK8   B4LF09   B3M833   A0A1L8F7I5   H3AV81   A0A1B0FKZ6   A0A0A9XN97   A0A1A9Z969   Q29DQ4   B4H781   A0A3P9I2L1   B4K2U7   B4J3H2   A0A3Q3JMH7   A0A1A9XSE5   A0A3P9I2T9   A0A1A9WG07   B4PGQ4   A0A3P9LF10   A0A3B0JYU9   A0A3Q1J2T4   A0A3Q3JEU1   A0A3P9MM54   A0A1B0BIL6   A0A091RKS9   A0A3Q3JFE8   V9KJ45   A0A3B3CCB1   A0A3Q3JML2   V9KIC9   H2LZB9   A0A034WLL5   A0A2J7Q126   A0A091KK97   A0A3P8QQG2   A0A3P8QS74   A0A1W4VP74   H0Z2M6   A0A3P9BBD6   A0A3Q2YP10   K7J123   A0A091VRR3   B5RJ62   Q4V5Y6   Q9VZP8   Q4V5R8   B4HTR6   B4QPI8   A0A3B4ENN1   A0A091J449   A0A0K8V4K8   A0A0M3QVF8   A0A3S3PJX6  

PDB

5FQL     E-value=1.48308e-116,     Score=1074

KEGG

101744799    K01136 iduronate 2-sulfatase [EC:3.1.6.13] | (RefSeq) iduronate 2-sulfatase

PATHWAY

00531    Glycosaminoglycan degradation - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
04142    Lysosome - Bombyx mori (domestic silkworm)

GO

GO:0004423   GO:0008484   GO:0060347   GO:0060536   GO:0007224   GO:0030512   GO:0043009   GO:0061316   GO:0005737   GO:0016021   GO:0003824   GO:0008152   GO:0000123   GO:0004402   GO:0016573   GO:0008270   GO:0022891   GO:0003707   GO:0051537  

SignalP

Position:   1 - 22,         Likelihood:  0.656121

 

 

Length:

513

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.56829

Exp number, first 60 AAs:

0.04683

Total prob of N-in:

0.02070

outside

1  -  513

 

 

Pi

157.575942

Theta

151.356831

Tajima's D

0.131834

CLR

0.146382

CSRT

0.402429878506075

Interpretation

Uncertain