Gene

KWMTBOMO07655  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001292

Annotation

progesterone_receptor_membrane_component_2_[Bombyx_mori]

Location

Bomo_Chr13(-):3248222-3255265      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.074

CDS

ATGGATTCACCACCAGAGGTTGCTCCCTTGAAAAAACTACCTAAATTGCGAAAAGATATGACCGCAGTAGAACTACGGCAGTACGACGGGACACAGGAGGGTGGCAGAGTGTTGATGGCTGTGAATGGGTGGATATTCGATGTGACTAGAGGGAATCGGTTCTACGGTCCCGGTGGGCCATATGCTGTTTTTGGAGGAAGAGATGCCACAAGAGGACTCGCCACGTTCTCTGTCACAGCACCTGAAAAGGACTATGATGACTTGAGTGATCTCAACTCTATGGAAATGGAATCAGTGAGGGAATGGGAGGAACAATTTAGAGAGAATTATGATCTGGTCGGTCGACTTCTGAGGCCTGGTGAAGAACCCAGGAACTACTCGGACGAAGAACCCGAAGAAGCAGACACGTCCGCTCTCCCCAACGACGACAAGAAAACAAATTGA

Protein

MDSPPEVAPLKKLPKLRKDMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSVTAPEKDYDDLSDLNSMEMESVREWEEQFRENYDLVGRLLRPGEEPRNYSDEEPEEADTSALPNDDKKTN

Similarity

Belongs to the cytochrome b5 family.

Uniprot

Q2F5N3   H9IVL2   A0A2A4K771   A0A1E1WG86   S4PPK0   A0A3S2N587   + More
A0A194PEJ6   A0A194R3V4   A0A1Z2RRL1   A0A212ES84   D2A0J9   A0A0K8TN47   V5GVR3   A0A1J1ITA0   U5EFV8   N6TFW3   J3JTH6   A0A1Y1KZN4   A0A084VV69   A0A182JCQ5   E0VCF2   A0A146LKZ3   A0A232FAV2   A0A2A4IU98   K7ISI4   Q9VXM4   B4IKF4   A0A1L8E169   A0A2M4C072   T1E728   A0A2M3YZT1   A0A2M4A4S7   A0A2M4A9P7   A0A161MQT9   I4DMH8   A0A023F8C5   A0A182F602   T1P889   A0A2P8YWL4   B3NXI0   B4PX88   A0A1L8E124   W5J1G2   A0A023FUB9   A0A023GG41   G3MM04   L7M742   A0A1E1XUF4   A0A023FFN3   A0A023EJT3   A0A069DP82   A0A224XQ28   A0A0C9SD70   A0A158P164   A0A151HZI4   T1IQC1   A0A151J3M1   A0A131XCD8   E2AQY5   A0A195CK83   I4DJ14   A0A1L8EE16   A0A026W1I3   A0A0N7Z989   A0A1L8EE88   A0A194QZ24   A0A1I8PPN9   A0A154PIQ9   A0A087TDQ7   A0A195F3W5   R4G4F6   A0A151X8Z2   A0A2H1V8I6   A0A194PJ68   A0A1E1WBG9   A0A1A9WA56   E2BWH9   A0A0J7NNW8   F4W9A3   A0A293MV77   A0A1A9UM60   A0A2R5LDV5   B0WV18   A0A1A9Z8I9   A0A3G1T1I5   A0A1A9XXZ9   A0A1B0BX16   A0A3S2LW93   S4PBX3   A0A2P6L8S6   A0A131YZ06   E9IKT2   A0A1E1XBI1   E0X658   T1IHL6   A0A023EKZ7   B4KIH4   A0A2R7WYQ7   A0A023EL38   A0A023ENE9  

Pubmed

19121390    23622113    26354079    28605547    22118469    18362917    + More
19820115    26369729    23537049    22516182    28004739    24438588    20566863    26823975    28648823    20075255    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17994087    22651552    25474469    25315136    29403074    18057021    17550304    20920257    23761445    22216098    25576852    29209593    24945155    26334808    26131772    21347285    28049606    20798317    24508170    30249741    27129103    21719571    26830274    21282665    28503490    20566361   

EMBL

DQ311390    ABD36334.1    BABH01001348    BABH01001349    NWSH01000056    PCG80125.1    + More
GDQN01005173    JAT85881.1    GAIX01000207    JAA92353.1    RSAL01000408    RVE41871.1    KQ459606    KPI91114.1    KQ460947    KPJ10521.1    KY963167    ASA46487.1    AGBW02012839    OWR44366.1    KQ971338    EFA02516.1    GDAI01002253    JAI15350.1    GALX01004133    JAB64333.1    CVRI01000057    CRL02334.1    GANO01003716    JAB56155.1    APGK01029308    APGK01029309    KB740732    ENN79274.1    BT126533    KB632390    AEE61497.1    ERL94417.1    GEZM01072038    JAV65620.1    ATLV01017157    KE525157    KFB41863.1    DS235053    EEB11058.1    GDHC01009886    JAQ08743.1    NNAY01000581    OXU27563.1    NWSH01008064    PCG62710.1    AE014298    AY061163    AB290904    AB290905    AAF48534.1    AAL28711.1    ACZ95300.1    AGB95429.1    BAF95203.1    CH480852    EDW51546.1    GFDF01001655    JAV12429.1    GGFJ01009576    MBW58717.1    GAMD01003402    JAA98188.1    GGFM01001022    MBW21773.1    GGFK01002401    MBW35722.1    GGFK01004160    MBW37481.1    GEMB01002120    JAS01059.1    AK402496    BAM19118.1    GBBI01001167    JAC17545.1    KA644812    AFP59441.1    PYGN01000316    PSN48647.1    CH954180    EDV46939.1    KQS30285.1    KQS30286.1    KQS30287.1    CM000162    EDX01851.1    KRK06369.1    KRK06370.1    GFDF01001656    JAV12428.1    ADMH02002182    ETN58007.1    GBBL01001909    JAC25411.1    GBBM01002554    JAC32864.1    JO842905    AEO34522.1    GACK01006100    JAA58934.1    GFAA01000496    JAU02939.1    GBBK01003696    JAC20786.1    GAPW01004262    JAC09336.1    GBGD01003041    JAC85848.1    GFTR01003242    JAW13184.1    GBZX01001997    JAG90743.1    ADTU01001047    KQ976664    KYM78296.1    JH431303    KQ980275    KYN17021.1    GEFH01003257    JAP65324.1    GL441846    EFN64131.1    KQ977720    KYN00484.1    AK401282    BAM17904.1    GFDG01001847    JAV16952.1    KK107488    QOIP01000012    EZA49922.1    RLU16260.1    GDKW01001219    JAI55376.1    GFDG01001845    JAV16954.1    KPJ10534.1    KQ434926    KZC11739.1    KK114763    KFM63246.1    KQ981855    KYN34867.1    GAHY01001405    JAA76105.1    KQ982402    KYQ56847.1    ODYU01001210    SOQ37116.1    KPI91130.1    GDQN01010066    GDQN01006731    GDQN01001056    GDQN01000301    JAT80988.1    JAT84323.1    JAT89998.1    JAT90753.1    GL451131    EFN79935.1    LBMM01002911    KMQ94195.1    GL888002    EGI69285.1    GFWV01019291    MAA44019.1    GGLE01003479    MBY07605.1    DS232115    EDS35346.1    MG992419    AXY94857.1    JXJN01022027    RSAL01000161    RVE45403.1    GAIX01008115    JAA84445.1    MWRG01000919    PRD34990.1    GEDV01004144    JAP84413.1    GL764026    EFZ18849.1    GFAC01002630    JAT96558.1    GQ505293    ADK38544.1    JH429930    GAPW01003741    JAC09857.1    CH933807    EDW13471.1    KK856015    PTY24642.1    GAPW01003670    JAC09928.1    GAPW01003669    JAC09929.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053268    UP000053240    UP000007151    + More
UP000007266    UP000183832    UP000019118    UP000030742    UP000030765    UP000075880    UP000009046    UP000215335    UP000002358    UP000000803    UP000001292    UP000069272    UP000095301    UP000245037    UP000008711    UP000002282    UP000000673    UP000005205    UP000078540    UP000078492    UP000000311    UP000078542    UP000053097    UP000279307    UP000095300    UP000076502    UP000054359    UP000078541    UP000075809    UP000091820    UP000008237    UP000036403    UP000007755    UP000078200    UP000002320    UP000092445    UP000092443    UP000092460    UP000009192   

PRIDE

Q2F5N3    H9IVL2    Q9VXM4   

Pfam

PF00173   Cyt-b5

Interpro

IPR036400   Cyt_B5-like_heme/steroid_sf        + More
IPR001199   Cyt_B5-like_heme/steroid-bd       

SUPFAM

SSF55856   SSF55856       

Gene 3D

3.10.120.10    

ProteinModelPortal

Q2F5N3   H9IVL2   A0A2A4K771   A0A1E1WG86   S4PPK0   A0A3S2N587   + More
A0A194PEJ6   A0A194R3V4   A0A1Z2RRL1   A0A212ES84   D2A0J9   A0A0K8TN47   V5GVR3   A0A1J1ITA0   U5EFV8   N6TFW3   J3JTH6   A0A1Y1KZN4   A0A084VV69   A0A182JCQ5   E0VCF2   A0A146LKZ3   A0A232FAV2   A0A2A4IU98   K7ISI4   Q9VXM4   B4IKF4   A0A1L8E169   A0A2M4C072   T1E728   A0A2M3YZT1   A0A2M4A4S7   A0A2M4A9P7   A0A161MQT9   I4DMH8   A0A023F8C5   A0A182F602   T1P889   A0A2P8YWL4   B3NXI0   B4PX88   A0A1L8E124   W5J1G2   A0A023FUB9   A0A023GG41   G3MM04   L7M742   A0A1E1XUF4   A0A023FFN3   A0A023EJT3   A0A069DP82   A0A224XQ28   A0A0C9SD70   A0A158P164   A0A151HZI4   T1IQC1   A0A151J3M1   A0A131XCD8   E2AQY5   A0A195CK83   I4DJ14   A0A1L8EE16   A0A026W1I3   A0A0N7Z989   A0A1L8EE88   A0A194QZ24   A0A1I8PPN9   A0A154PIQ9   A0A087TDQ7   A0A195F3W5   R4G4F6   A0A151X8Z2   A0A2H1V8I6   A0A194PJ68   A0A1E1WBG9   A0A1A9WA56   E2BWH9   A0A0J7NNW8   F4W9A3   A0A293MV77   A0A1A9UM60   A0A2R5LDV5   B0WV18   A0A1A9Z8I9   A0A3G1T1I5   A0A1A9XXZ9   A0A1B0BX16   A0A3S2LW93   S4PBX3   A0A2P6L8S6   A0A131YZ06   E9IKT2   A0A1E1XBI1   E0X658   T1IHL6   A0A023EKZ7   B4KIH4   A0A2R7WYQ7   A0A023EL38   A0A023ENE9  

PDB

4X8Y     E-value=6.11229e-29,     Score=311

KEGG

692962    K17278 membrane-associated progesterone receptor component | (RefSeq) Pgrmc2; progesterone receptor

GO

GO:0016021   GO:0032440   GO:0012505   GO:0035100   GO:0005886  

Length:

147

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00385

Exp number, first 60 AAs:

0.00325

Total prob of N-in:

0.02614

outside

1  -  147

 

 

Pi

244.793384

Theta

177.231766

Tajima's D

0.571375

CLR

0.382203

CSRT

0.532873356332183

Interpretation

Uncertain