Gene

KWMTBOMO07650

Pre Gene Modal

BGIBMGA001293

Annotation

PREDICTED:_WD_repeat-containing_protein_19_isoform_X3_[Bombyx_mori]

Location

Bomo_Chr13(-):3172970-3199225      View in EpiBrowser

Full name

WD repeat-containing protein 19      

Alternative Name

Intraflagellar transport 144 homolog

Location in the cell

Cytoplasmic   Reliability : 1.459

CDS

ATGACGGCGCCAAAATTATTATCTTCTATTGATCAACCTCACGGCCTTGGTGAGTTGTACTTTTTGTGGCAGAAGGGTGAATCCCATACATTGCTAGCGACCACTGGTACGGATGCCACTGTTGTTATCCATAATAGAAATGGACAGTTGGTAGAAAGGATTAAGCTATCGGGACTATGTGCAGATATGGAATGGGACAACGATGGAGATTATCTAGCCATTATTACACCTAATAGTAATGCAGTTTTACTTTGGGAATGCCATGCTAATAAACGGTTGAACATTGAGACGGGCCTGCGTGAACCACCTTCGTGTCTTGCTTGGGCTTACGAAGAACCTTTACTAGCAGTTGGTACACATAAAGGGAATTTAGCCCTTTATAATCATCATACCACAAAGAGAATTCCAATAATAGGGAAACACAGTAAAAAGATATGTTGTGCTGTATGGAATAAAGACAACATACTTATACTTGCTTCAGAAGATAAGACATTGTCCATAAATAATTCAGATGGAGACACACTCAGGATAATATCACTAAGGGATACTCCTAATGATTTGCAAGTTTCTGAGATGAAGACAGATGAACGAGTTGCAGGGGAAAATACAGTAAGCCTTATTGTTGGGAAACGCACATTATATCTTTACAATCTTTTGAATCCCGACAACCCAATAGAGTTAGCATTCCAACAACGTTATGGTTCCATAGTTTCGTACAAATGGTATGGCGATGGTTACATTCTTATAGGGTTCAGTGCTGGATTCATCATATCAATATCGACACACATCAAAGAGGTCGGCGAAGAATTGTTTCAGGTCAAGAACCATAAAGATAGTTTGACCGACATAGCGGTGTGTAACGGGCAGGCCGCTTCGTGTGGGGATGGACAGTTAAAGTTGATCTCAGTTTGGAATAATGGTGAGGTGAGTGGATCGGTGATGCCGACGGGGGGAGCCGAGCGTTGCGGGTGGAGCTCCGACGGAAGGTTACTAGCGACTTCCGGGCGAGGGTACCTGAACGTTTACGTGACCACGCTACCCCCCCTGTACGCTACATACGGAACCAGAGCTCTCACTCTGACCAGTCTCACTGAAGTCACGGTTTACCAGTGCATCGGGGTCGAGGATGCCCCCGAACCTATTAATAAATCGGAGCCGACAGCTCTGGCGACCTACGCGCTGCCCGTGGAACCGACTCTAATAGCGCTGGGGGGCTCGCACTTGTGCTGCGTGCACGGCTCGGACGCCTGGTTCTACCCGCTGTCGGCCGCCGCCGGCCGCGCCCGCCCCCGCCCCCGCCGCTACCCCGCGCCCCTCGACCGCCTGCGCCTCGCCGGGGACTACGCCGCCGCGCTGTTCGAGGGCCGTGCCATGCTGCACACCATTGAACAACCGGACTCGTCTCAGGCCGAAAGGGAATGCATGATGTTTCCCGAACCGCACATGCAGGGCGCTAAGATTGTGGACATTCATCTCACCGCCGACTTTTTTATATTCATCACAGATCAAGGTCACGTGGAGCACTTCGGCGTGGAGGAGTGGCGCACGAGCGTGCGGCATCGGGCGGCGGGCGCGCTGTGCGCCGCGTACGGCGACATCAGCGGCACGCGCGCCTGCCTCGCCGACACCGCGCGCCGCCTGCTCGTGTACTGCCCCGCCGCGCCGCACGACCTCTGCCCCCTGCGCGAACCGAAACTTTTCAGAGGGGTCATCTGGGATATTTGTTTGTCGGATCGGAACGTGTTTATCGTGTACACGGATGACAAAATTGACACATACTACTACGTGTCGAACTCTATAAACGGATCCCACGTTGACCTGGTCGCGAGCACCAGCATCCTGCCTGGCCAGATCCCTCTCATACTGTTCTCCGGCGACGTGTACTGCTACGCAAGCGGGGGCAGCATCATAAAAGTTCCATTAGATTCGCACAACACGAGCGGGCTGGCGGACCCGGACACCGAGAAGCGGGTCGCCAACCAACGGAAGCACATCGAGAAGATGCTCCTCCTGAGGAGGTTCAGTGACGCCTGGCTGTTCTGCGACGCGGTCGACGAGCCCGACGTGTGGCGGAGACTCGGCGAGGCGGCCATCGCCGACCTGAATGTGGAATTTGCGATACGTGTGTACACTCGGCTGAGCGACGTGGGCACGGTGTGGGCGCTGGAAGACGCCGCGCATGTTGAAGATTTGTCGGTGCTGTGTGGCATGCTATGCGCCTGCGTGGGCCAGGGCGCGGCGGCGGCTCGGTGGGCGGAAGGCTCGCCCCTGGCCCTAGAGCTGGCGTGCGCGCGCGGCTTGTGGCGCGACGCGGCCGCGCGGGCGCTCGCCGCCGCCCCGCTGCACGCGCCGCTCGTCACCGCGCAACACGCGCACCACCTCGAACTCACAGCCGATTATCACGAGGCACTGGCCAACTACGAGAAAAGTATAATTACCGAGAATTTAGACGATGCGAAAGTAAGGGAACACAATAGGAAGTGCGAGGCCGGTATAGCGCGTACTGCGATCCGCTGCGGTGACGTCATGCGCGGTGTTACCACTGCCATGAAACTCGCCGATGACGTCACGCTGCTCAAGGAATGCGCTCAGCTCTTAGAAGAAGAGAAGCAGTACAGTCACGCGGCCGCTCTGTACGATCACGCCGGTAACACCGAACGAGCAGCGTCTCTATACATCAAACTGAAATCTTGGCTCAAAGTCGAAGCCCTGTTACCTAAGATCAATTCGCCCAGCATCCACATTCAGTACGCCAAAGCAAAGGAAGCGGAAGGTCGCTACCACGATGCATTAAAATCGTATCTGAAGGCTCAGGATTACGAAGCGGCCATCCGATTGAATCTCGATAAACTTGAAGACATCGACGAGGCAGTTCACTTAGTTCAAGAAACGAAATCGGTGCAAGGGGCGAAAATGGTCGCCAATTACTTTCAGAACAGCGACGACTCGAGCTCAGCGATAAAGTTCCTAGTGATGTCGCTTTGTTACGACGACGCATTCCAGCTGGCCAGGAAGAACGGGAAGCTGCAGCTGTACGGCGAGATACTGATCCAGACGTCGCAGGCTCGTTCGGAGGATTTCAAGAGCTTGGCCTTGCATTTCGAGGGGGAGAAGAATCATTTGTTGGCGGGAAAGTTTTACTTCCACGCTGCCGATTACAACAGAGCCATGTCGCACTTGCTGAAGGCCGGCGGCTCCGAAGAAGACGAGAATGAGGCGATCAGTGTAGCCATCGACGCGGCCGCGGCTAGCGACGACGAACGACTAACCAGGAGGTTAATAGAGTTACTGTTGGGCGAGACTGACGGGACACCGCGGGAGCCACGTCATTTATTTAGGTTGTACATGGCCAAGAAACAGTTCATGGAAGCGGCCAAAACTGCGGTGATTATATGCAACGCGGAGTGTCGCAGCGGCCGGTACCGGGAGGCGCGCGCCGTGCTGCGTGGGGCCCGGGCCGCCCTGCGCCGCCCCCCGCGTGACCTCCGCCACGCACTGGCGCTGCTGCACTCCTACATATTGGTTCGCACGCACGTCCGCCGCGGCAACCACGAGCTGGCGGCGCTGCTGCTGCTGCGCATCGCTGATGAGGTCACCTTCTTCCCTTTGCCTCAACATCAAGTATCGATCTTGACATCGACGGTGATCGAGTGCAGTCGCGCGGGCCTCAAGCACCAGGCCCACCGCTGGGCCCGGGCCCTCATGCAGCCCGAGCTCAGGTCTCAGATCGATCCGAAGTATTCGAAGAAGATCGAGTGCGTGGTGCGTCACGTGCCGCGCGGCGCCCCGCCCCCGCCCCGCGCCGCGCCCTGCCCCCGCTGCGCCCGCGCGCTGCCCGCCGCCGCGCTGGCGTGCGCGCACTGCGGCGCCGACCTGCCCTTCTGTCTCGCCACGGGAATGCATATCGTCAAAGATGATTTAACTGCGTGTCCCGAGTGCGACTTCCCAGCCATTCTCAGTGAATTCACAGAATTACTCCGCGATGAAGGTAAGTGTCCGATGTGTGACGAGAGCGTGGACTACCGACGGCTGGTCAAAATCGACGATGTCTCAATTTACTTGGATTCTAACACTAGTGAGTAA

Protein

MTAPKLLSSIDQPHGLGELYFLWQKGESHTLLATTGTDATVVIHNRNGQLVERIKLSGLCADMEWDNDGDYLAIITPNSNAVLLWECHANKRLNIETGLREPPSCLAWAYEEPLLAVGTHKGNLALYNHHTTKRIPIIGKHSKKICCAVWNKDNILILASEDKTLSINNSDGDTLRIISLRDTPNDLQVSEMKTDERVAGENTVSLIVGKRTLYLYNLLNPDNPIELAFQQRYGSIVSYKWYGDGYILIGFSAGFIISISTHIKEVGEELFQVKNHKDSLTDIAVCNGQAASCGDGQLKLISVWNNGEVSGSVMPTGGAERCGWSSDGRLLATSGRGYLNVYVTTLPPLYATYGTRALTLTSLTEVTVYQCIGVEDAPEPINKSEPTALATYALPVEPTLIALGGSHLCCVHGSDAWFYPLSAAAGRARPRPRRYPAPLDRLRLAGDYAAALFEGRAMLHTIEQPDSSQAERECMMFPEPHMQGAKIVDIHLTADFFIFITDQGHVEHFGVEEWRTSVRHRAAGALCAAYGDISGTRACLADTARRLLVYCPAAPHDLCPLREPKLFRGVIWDICLSDRNVFIVYTDDKIDTYYYVSNSINGSHVDLVASTSILPGQIPLILFSGDVYCYASGGSIIKVPLDSHNTSGLADPDTEKRVANQRKHIEKMLLLRRFSDAWLFCDAVDEPDVWRRLGEAAIADLNVEFAIRVYTRLSDVGTVWALEDAAHVEDLSVLCGMLCACVGQGAAAARWAEGSPLALELACARGLWRDAAARALAAAPLHAPLVTAQHAHHLELTADYHEALANYEKSIITENLDDAKVREHNRKCEAGIARTAIRCGDVMRGVTTAMKLADDVTLLKECAQLLEEEKQYSHAAALYDHAGNTERAASLYIKLKSWLKVEALLPKINSPSIHIQYAKAKEAEGRYHDALKSYLKAQDYEAAIRLNLDKLEDIDEAVHLVQETKSVQGAKMVANYFQNSDDSSSAIKFLVMSLCYDDAFQLARKNGKLQLYGEILIQTSQARSEDFKSLALHFEGEKNHLLAGKFYFHAADYNRAMSHLLKAGGSEEDENEAISVAIDAAAASDDERLTRRLIELLLGETDGTPREPRHLFRLYMAKKQFMEAAKTAVIICNAECRSGRYREARAVLRGARAALRRPPRDLRHALALLHSYILVRTHVRRGNHELAALLLLRIADEVTFFPLPQHQVSILTSTVIECSRAGLKHQAHRWARALMQPELRSQIDPKYSKKIECVVRHVPRGAPPPPRAAPCPRCARALPAAALACAHCGADLPFCLATGMHIVKDDLTACPECDFPAILSEFTELLRDEGKCPMCDESVDYRRLVKIDDVSIYLDSNTSE

Description

As component of the IFT complex A (IFT-A), a complex required for retrograde ciliary transport and entry into cilia of G protein-coupled receptors (GPCRs), it is involved in cilia function and/or assembly (Probable). Essential for functional IFT-A assembly and ciliary entry of GPCRs (By similarity). Associates with the BBSome complex to mediate ciliary transport (PubMed:22922713).

Subunit

Component of the IFT complex A (IFT-A) complex. IFT-A complex is divided into a core subcomplex composed of IFT122:IFT140:WDR19 which is associated with TULP3 and a peripheral subcomplex composed of IFT43:WDR35:TTC21B (By similarity). Interacts (via C-terminal region) with IFT122 (via C-terminal region) (By similarity). Interacts with BBS1 (PubMed:22922713). Interacts with TTC25 (PubMed:25860617).

Keywords

Alternative splicing   Cell projection   Cilium   Complete proteome   Cytoplasm   Cytoskeleton   Reference proteome   Repeat   TPR repeat   WD repeat  

Feature

chain  WD repeat-containing protein 19
splice variant  In isoform 2.

Uniprot

A0A212ESF4   A0A194PCT2   A0A194QZ07   A0A2H1V412   A0A2J7R2J5   A0A1Y1N7Q1   + More
A0A067RC29   A0A2A3ESW9   A0A151J3K6   E2BWH8   A0A158P173   A0A0L7R7X5   A0A3L8D7I3   A0A026W2V6   C3Z0T8   A0A154PKB4   A0A151HZN4   A0A0C9QPZ4   A0A210QC01   V4BLI5   A0A3B1INX8   S4RCS6   A0A2D0QHV2   E7FGG5   A0A2D0QH05   A0A2R8RPG4   A0A2R8RPA6   A0A1U8DLB3   A0A0M8ZRU4   A0A3B3RME7   U3IRT1   K7FRT1   R0J880   K7FRS3   A0A093GC61   U6CTS7   M3Y3Q8   A0A091XDT8   A0A2Y9JQH1   A0A2I0MMK8   A0A091TUH8   A0A091GEJ7   G1NIA6   W5N605   G1KGR9   I3LLZ8   A0A091JAI4   A0A091QI95   I3JR00   G3TF13   A0A091UWY6   A0A091TLQ7   A0A3P4MU08   A0A2Y9MHR2   A0A383ZUT0   A0A2C9JSM6   A0A2Y9EI15   A0A2U4ASE5   A0A151X941   A0A091TBV6   E1B7Q4   A0A099ZDD1   A0A341AEC1   M3VX95   A0A1S2ZQ78   A0A3Q1C2F2   A0A1W4YIY8   A0A091SQ19   W5PM40   A0A340WPA0   A0A3P8TSU1   A0A2Y9I6T9   A0A091F465   F6S6A1   A0A3B5B1S0   A0A087R3R6   G1L9A4   A0A1V4JFV6   A0A094KB33   A0A3Q7S440   A0A0A0AG70   A0A091PPA0   A0A093IBJ1   A0A3L8SUF3   A0A093PLM0   A0A3Q7QAN7   I3M926   A0A2U3VMG7   A0A087VE21   A0A2U3XLN5   Q3UGF1   A0A3P9DBR3   A0A093HCY5   H0ZF91   A0A1L8HTM3  

Pubmed

22118469    26354079    28004739    24845553    20798317    21347285    + More
30249741    24508170    18563158    28812685    23254933    25329095    23594743    29240929    23749191    17381049    23371554    20838655    25186727    15562597    19393038    17975172    20809919    19892987    20010809    30282656    12906858    16141072    14621295    15489334    16957054    19208653    21183079    22922713    25860617    20360741    27762356   

EMBL

AGBW02012839    OWR44371.1    KQ459606    KPI91111.1    KQ460947    KPJ10519.1    + More
ODYU01000558    SOQ35516.1    NEVH01007828    PNF35060.1    GEZM01013292    JAV92675.1    KK852744    KDR17352.1    KZ288192    PBC34239.1    KQ980275    KYN17020.1    GL451131    EFN79934.1    ADTU01001047    KQ414638    KOC66851.1    QOIP01000012    RLU16259.1    KK107488    EZA49921.1    GG666570    EEN53842.1    KQ434926    KZC11738.1    KQ976664    KYM78295.1    GBYB01005724    JAG75491.1    NEDP02004225    OWF46250.1    KB202591    ESO89539.1    BX284619    BX005212    KQ435883    KOX69667.1    ADON01146382    ADON01146383    AGCU01130272    AGCU01130273    AGCU01130274    AGCU01130275    AGCU01130276    AGCU01130277    AGCU01130278    KB746632    EOA93365.1    KL215357    KFV64349.1    HAAF01001421    CCP73247.1    AEYP01059848    AEYP01059849    AEYP01059850    AEYP01059851    AEYP01059852    AEYP01059853    AEYP01059854    KK734915    KFR11451.1    AKCR02000006    PKK30910.1    KK405420    KFQ81901.1    KL448105    KFO80383.1    AHAT01001979    AEMK02000064    KK501803    KFP18034.1    KK798242    KFQ26888.1    AERX01027852    KL410183    KFQ94490.1    KK458525    KFQ77797.1    CYRY02013851    VCW84272.1    KQ982402    KYQ56849.1    KK948512    KFQ56376.1    KL893137    KGL80419.1    AANG04001605    KK482192    KFQ60807.1    AMGL01098079    AMGL01098080    KK719676    KFO64948.1    KL226078    KFM08120.1    ACTA01003541    ACTA01011541    ACTA01019541    ACTA01147538    ACTA01155537    ACTA01163536    ACTA01171534    ACTA01179532    ACTA01187530    ACTA01195528    LSYS01007721    OPJ71030.1    KL347266    KFZ56598.1    KL871738    KGL93186.1    KK676298    KFQ09126.1    KK557304    KFV98982.1    QUSF01000005    RLW09059.1    KL225501    KFW73067.1    AGTP01015518    KL489799    KFO10863.1    AY029258    AK052303    AK147970    AK129413    BC046432    KL206236    KFV80463.1    ABQF01015548    CM004466    OCT99434.1   

Proteomes

UP000007151    UP000053268    UP000053240    UP000235965    UP000027135    UP000242457    + More
UP000078492    UP000008237    UP000005205    UP000053825    UP000279307    UP000053097    UP000001554    UP000076502    UP000078540    UP000242188    UP000030746    UP000018467    UP000245300    UP000221080    UP000000437    UP000189705    UP000053105    UP000261540    UP000016666    UP000007267    UP000053875    UP000000715    UP000053605    UP000248482    UP000053872    UP000053760    UP000001645    UP000018468    UP000001646    UP000008227    UP000053119    UP000005207    UP000007646    UP000053283    UP000248483    UP000261681    UP000076420    UP000248484    UP000245320    UP000075809    UP000009136    UP000053641    UP000252040    UP000011712    UP000079721    UP000257160    UP000192224    UP000002356    UP000265300    UP000265080    UP000248481    UP000052976    UP000002281    UP000261400    UP000053286    UP000008912    UP000190648    UP000286640    UP000053858    UP000276834    UP000054081    UP000286641    UP000005215    UP000245340    UP000245341    UP000000589    UP000265160    UP000053584    UP000007754    UP000186698   

PRIDE

I3LLZ8    Q3UGF1   

Pfam

PF15911   WD40_3        + More
PF00750   tRNA-synt_1d
PF05746   DALR_1
PF12894   ANAPC4_WD40

Interpro

IPR015943   WD40/YVTN_repeat-like_dom_sf        + More
IPR011047   Quinoprotein_ADH-like_supfam       
IPR011990   TPR-like_helical_dom_sf       
IPR001680   WD40_repeat       
IPR040379   WDR19/dyf-2       
IPR039468   WDR19_WD40_rpt       
IPR019734   TPR_repeat       
IPR001278   Arg-tRNA-ligase       
IPR014729   Rossmann-like_a/b/a_fold       
IPR001412   aa-tRNA-synth_I_CS       
IPR035684   ArgRS_core       
IPR008909   DALR_anticod-bd       
IPR009080   tRNAsynth_Ia_anticodon-bd       
IPR036322   WD40_repeat_dom_sf       
IPR017986   WD40_repeat_dom       
IPR024977   Apc4_WD40_dom       
IPR011044   Quino_amine_DH_bsu       
IPR016024   ARM-type_fold       

SUPFAM

SSF50998   SSF50998        + More
SSF47323   SSF47323       
SSF48452   SSF48452       
SSF50978   SSF50978       
SSF50969   SSF50969       
SSF48371   SSF48371       

Gene 3D

1.25.40.10     2.130.10.10     3.40.50.620    

ProteinModelPortal

A0A212ESF4   A0A194PCT2   A0A194QZ07   A0A2H1V412   A0A2J7R2J5   A0A1Y1N7Q1   + More
A0A067RC29   A0A2A3ESW9   A0A151J3K6   E2BWH8   A0A158P173   A0A0L7R7X5   A0A3L8D7I3   A0A026W2V6   C3Z0T8   A0A154PKB4   A0A151HZN4   A0A0C9QPZ4   A0A210QC01   V4BLI5   A0A3B1INX8   S4RCS6   A0A2D0QHV2   E7FGG5   A0A2D0QH05   A0A2R8RPG4   A0A2R8RPA6   A0A1U8DLB3   A0A0M8ZRU4   A0A3B3RME7   U3IRT1   K7FRT1   R0J880   K7FRS3   A0A093GC61   U6CTS7   M3Y3Q8   A0A091XDT8   A0A2Y9JQH1   A0A2I0MMK8   A0A091TUH8   A0A091GEJ7   G1NIA6   W5N605   G1KGR9   I3LLZ8   A0A091JAI4   A0A091QI95   I3JR00   G3TF13   A0A091UWY6   A0A091TLQ7   A0A3P4MU08   A0A2Y9MHR2   A0A383ZUT0   A0A2C9JSM6   A0A2Y9EI15   A0A2U4ASE5   A0A151X941   A0A091TBV6   E1B7Q4   A0A099ZDD1   A0A341AEC1   M3VX95   A0A1S2ZQ78   A0A3Q1C2F2   A0A1W4YIY8   A0A091SQ19   W5PM40   A0A340WPA0   A0A3P8TSU1   A0A2Y9I6T9   A0A091F465   F6S6A1   A0A3B5B1S0   A0A087R3R6   G1L9A4   A0A1V4JFV6   A0A094KB33   A0A3Q7S440   A0A0A0AG70   A0A091PPA0   A0A093IBJ1   A0A3L8SUF3   A0A093PLM0   A0A3Q7QAN7   I3M926   A0A2U3VMG7   A0A087VE21   A0A2U3XLN5   Q3UGF1   A0A3P9DBR3   A0A093HCY5   H0ZF91   A0A1L8HTM3  

PDB

5H13     E-value=0.0320433,     Score=92

KEGG

101745089    K19671 WD repeat-containing protein 19 | (RefSeq) WD repeat-containing protein 19

GO

GO:0005929   GO:0035721   GO:0005524   GO:0004814   GO:0006420   GO:0030991   GO:0060271   GO:0031514   GO:0000902   GO:0032391   GO:0031076   GO:0030326   GO:0008406   GO:0042471   GO:0065003   GO:0060831   GO:0048701   GO:0050877   GO:0061055   GO:0055123   GO:1903441   GO:0016604   GO:0060830   GO:0001701   GO:0061512   GO:0005856   GO:0005654   GO:0005737   GO:0097730   GO:0001750   GO:0007224   GO:0005515   GO:0003676   GO:0043565   GO:0005634   GO:0015074   GO:0005488   GO:0022891   GO:0003707   GO:0051537  

PANTHER

PTHR14920  

Subcellular location

Cell projection   Localizes to photoreceptor connecting cilia, to the base of motile cilia in brain ependymal cells and to the base of and along primary cilia in cultured kidney inner mnedullary collecting duct (IMCD) cells.   With evidence from 3 publications.
Cilium   Localizes to photoreceptor connecting cilia, to the base of motile cilia in brain ependymal cells and to the base of and along primary cilia in cultured kidney inner mnedullary collecting duct (IMCD) cells.   With evidence from 3 publications.
Cytoplasm   Localizes to photoreceptor connecting cilia, to the base of motile cilia in brain ependymal cells and to the base of and along primary cilia in cultured kidney inner mnedullary collecting duct (IMCD) cells.   With evidence from 3 publications.
Cytoskeleton   Localizes to photoreceptor connecting cilia, to the base of motile cilia in brain ependymal cells and to the base of and along primary cilia in cultured kidney inner mnedullary collecting duct (IMCD) cells.   With evidence from 3 publications.
Cilium basal body   Localizes to photoreceptor connecting cilia, to the base of motile cilia in brain ependymal cells and to the base of and along primary cilia in cultured kidney inner mnedullary collecting duct (IMCD) cells.   With evidence from 3 publications.
Photoreceptor outer segment   Localizes to photoreceptor connecting cilia, to the base of motile cilia in brain ependymal cells and to the base of and along primary cilia in cultured kidney inner mnedullary collecting duct (IMCD) cells.   With evidence from 3 publications.

Length:

1360

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.724389999999997

Exp number, first 60 AAs:

0.00117

Total prob of N-in:

0.02916

outside

1  -  1360

 

 

Pi

21.736222

Theta

172.27375

Tajima's D

0.630786

CLR

0.199825

CSRT

0.552722363881806

Interpretation

Uncertain