Silkworm Genome Informatics Database

Gene

KWMTBOMO07649

Pre Gene Modal

BGIBMGA000850

Annotation

PREDICTED:_SH3_and_multiple_ankyrin_repeat_domains_protein_3_[Bombyx_mori]

Location

Bomo_Chr13(+):3163196-3169468 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.843

CDS

ATGATACGTTCCGCCTTCCAAGGAGGAGCGAACTCACCGCCCTATTCGCCGGCCAAAGGACCCGGTAAGGTGTACGCTTCCGTCGCCGAAATGAAGAGGTCTCGAGCCAAGTTGTGGAGCAAGTGCCCCGGCACGCTGCGGCGCGAGTTCCACTCGACGCCGGACCTGGCCGCCGAGCTGGCGCCGCACCCGCCCCGCACGCGCTCCACCGACGACGTGCACGGTTGCGGTCGCGTGCCCCCCCCGGCGCACCCCCCGCCGCCGCCCCCCGGGTCGGTCCCCGCGCCCCCCGCGTCCACGTTCCGGCCGGCGGAGGACGCCAAGCTGTACGCCGCGCCCGCCGCCCTGGCGCCGCTCGCCTACCGCGCGCCGCCGCCCGCGCACAACTTAAATGAAATAATGGAACAGAATCGCAAGGCGGTGTCGGCGCGCTCGTGGGCGGGCCCGGCGCGCGCGCGCTCCGCCGACGAGGGCGGACAGTACGCGCAACCCTTCCCCAAGGGCTTTGTCAGACAGAACTCGACCCCTGCGCCGCCCATCCCGGAGCCGGACTACAGCATGTCCGAGTCGGACGAGGAGGACGCGGCGCGGCCCCCTCCCGCCGCCGAGACCAGCGCCAACAGCAATACCAGTGGCAGCAGCTCGGGGTCGAGCTCGATGCAGCACTCGTTTTCGGTGGACGAGATACAGAAGATCCGCACGAGACTGAAGTCGTCCAAGTCGTGCGGCGACGAGCTGGGCGGCGCCGAGCGCGACGACGGCGACAACTCATCCTCCGGCGTCTCCTCGGACCAGGAGGCGCAGGCGCGGCCGCGGCGGGACAAGGTCTCCTTCTGCAGCTCCGTCACCGTCAAGTCGTCCAACGACGTCATCAGCACCGAGCCCGTGCACAGCTCGTCGGAGAGCCTGGCGCCCGCCGCCGGCGTCATGCAGCGCCACAACTCGCTCACCCGCAAGCGCGCCACGGCGGCCGTGCTGCGCGGCGCGGCGGGCGCGCGGGGCCGCTCGGCGGCGGAGCGGCTCGGCGTGGACGTGGACAAGGCGCCGGGGCGGCGGGCGCGCGCCGCCGTGTTGCTGGCCGAGCTGCCGCCCCCGCCGGAGGAGCCGGCCGCGGCGGCGGAGGGCGGCGCCCCGCTGCTGGCGCCGCCGCCCCAGTTCAGTGACCGCGTGCGAGTGGTGGCTGCGCTTCCGAAGCAGCTGGCCCGTCTGCAGTGA

Protein

MIRSAFQGGANSPPYSPAKGPGKVYASVAEMKRSRAKLWSKCPGTLRREFHSTPDLAAELAPHPPRTRSTDDVHGCGRVPPPAHPPPPPPGSVPAPPASTFRPAEDAKLYAAPAALAPLAYRAPPPAHNLNEIMEQNRKAVSARSWAGPARARSADEGGQYAQPFPKGFVRQNSTPAPPIPEPDYSMSESDEEDAARPPPAAETSANSNTSGSSSGSSSMQHSFSVDEIQKIRTRLKSSKSCGDELGGAERDDGDNSSSGVSSDQEAQARPRRDKVSFCSSVTVKSSNDVISTEPVHSSSESLAPAAGVMQRHNSLTRKRATAAVLRGAAGARGRSAAERLGVDVDKAPGRRARAAVLLAELPPPPEEPAAAAEGGAPLLAPPPQFSDRVRVVAALPKQLARLQ

Uniprot

A0A2H1V3V8 A0A0L7LU03 A0A194QYH7 A0A194PEJ1 A0A212ES99 A0A1L8DWC0 + More
A0A1L8DWB5

Pubmed

26227816 26354079 22118469

EMBL

ODYU01000558 SOQ35517.1 JTDY01000087 KOB78958.1 KQ460947 KPJ10517.1 + More
KQ459606 KPI91109.1 AGBW02012839 OWR44372.1 GFDF01003344 JAV10740.1 GFDF01003343 JAV10741.1

Proteomes

UP000037510 UP000053240 UP000053268 UP000007151

Pfam

PF17820   PDZ_6        + More
PF07653   SH3_2
PF12796   Ank_2
PF14604   SH3_9
PF16511   FERM_f0

Interpro

IPR036028   SH3-like_dom_sf        + More
IPR001478   PDZ
IPR002110   Ankyrin_rpt
IPR036034   PDZ_sf
IPR041489   PDZ_6
IPR036770   Ankyrin_rpt-contain_sf
IPR020683   Ankyrin_rpt-contain_dom
IPR001452   SH3_domain
IPR032425   FERM_f0

SUPFAM

SSF50156   SSF50156        + More
SSF50044   SSF50044
SSF48403   SSF48403

Gene 3D

1.25.40.20

CDD

cd00204 ANK

ProteinModelPortal

A0A2H1V3V8 A0A0L7LU03 A0A194QYH7 A0A194PEJ1 A0A212ES99 A0A1L8DWC0 + More
A0A1L8DWB5

KEGG

101745239 K15009 SH3 and multiple ankyrin repeat domains protein | (RefSeq) SH3 and multiple ankyrin repeat do

GO

Length:

404

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00019

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00530

outside

1 - 404

Pi

238.307372

Theta

159.714195

Tajima's D

1.456018

CLR

0.83705

CSRT

0.774061296935153

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics