Gene

KWMTBOMO07645

Pre Gene Modal

BGIBMGA007165

Annotation

PREDICTED:_uncharacterized_protein_LOC105381841_[Plutella_xylostella]

Location

Bomo_Chr13(-):3003131-3005995      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.017

CDS

ATGATACTTGACCAATCTACCGACGAGGAATTGCATTTATCTGATATCGATATAGGAGATTTAGAAAGGAATGATTGCAGTCGACTTTTACGGTTACTGAATAAATACAGACATTTGTTTGCGAAAAATACAAAAGATTTGGGATGTACAGACATACTGGAGATGCATATTCAGACCAAAACTGAGCAGCCTGTCTTTTGCAAGCCTTATCGACTCTCTCACAAAGAAAATGAAATTGTAAATGAAAAGGTTCAAGATCTTATTGATGCAGGTGTAATACGGAACTCCATGTCTGATTATGCAAGTCCAGTGGTCCTTGTAAAGAAAAAAGGTGGTGATTATAGGCTATGTATAGACTACAGAGCCCTTAATGCACGCACTATTAAAGATCGATATCCTCTGCCTCATATAGACGATCAGGTATCCCGCCTCTCTGGTAAATCTTTCTTTACAACTTTAGACCTAGCACAAAGCTACTATCAAATTAACTTATCTAAAGACTCTATTCATAAAACTGCATTTGTTACGCCTTCTGGGCAATATGAATTTTTAAAAATGCCATTTGGTTTAGCGAATGCACCAGCTGTATTTTCACGTCTTATCAAAATCGTTCTAGGTAGCTTAGGTAATGACGTAGCTACTTATCTCGATGACGTCATGTTACCTACAACTTCTGTTGATGACGGTCTTAAATTACTAGATAATGTATTAAAGCTCTTATCGGAAGCAAATTTGAAATTAAACCTTAGCAAATGTTCGTTTCTTAAGAGAAGTGTTAATTACTTAGGTCATGAGATAACTGCAGGCACAGTTCGACCAGGACAGGCTAAGATTAGTTGCGTATCTGAATATAGAAGACCTCGAAACGTGCATGAAATAAGACAGTTTATTGGTCTATCATCTTATTTTAGGAAATTTATTCGCGGATTTGCTGAAATAGCTAGACCTCTCACACAGTTGACAAAAAAGGATGTTCAATGGACGTGGGGCTCTGCCCAAGAAACTGCATTTCAAACGTTAAAAGAGCGTCTTGTCGAGAGACCAGTATTAGGTATATACGATAGGAATGCTCGCACTGAGCTTCATACTGACGCTAGTAAGCTAGGGCTGGGAGGTATCCTTTTGCAATACCAAAGCGATGGTGTTTTAAAACCAATTGCATACTTCAGTAGGGTTACAAGTAAAGAAGAACAGTTTTATCATAGTTATGAGCTTGAGACATTGGCAGTTGTAGATTCCTTGAAGCGCTTTAGAGTATATCTCGTAGGCGTTCCGGTAACTGTAGTGACAGATTGCGCCGCATTACGGACAACTCTAGTAAAAAAAGACCTCATTCCCCGTATAGCTCGCTGGTGGCTGTCAATTCAAGATTATGATCTGCAAATTGAGTATCGATCTGGCAGTCGAATGAGACACGTAGATGCCCTAAGTAGAAATCCAGTACAGGACTCTGTCCTATTCATTGATAACTCTGATTGGCTGGTGACATTACAATTACAAGACGAAAGTATTCAATCTCTTTTAACTCAGCTACGGAATGGTACAGACAATCAAAACATTATTTCTAACTATGCTATAAAGGATAACATCCTCTATAGAAAAACAATTAACGGGGACCGTTTTGTTATACCTAAATTGGCAAAATGGGGATTATTACAAAAATTTCATGACCAAATAGGACACGTTGGTTTTGATAAGTGCGAAAAAACTATTAAGGCACAGTTTTGGTTCGAGGGCATGACTAGATTTATTCGGAAATATATTAAGTCATGTCTTCAATGTGCTTACGGCAAAGGAGAGCACGGTAAATTACAGGGAGAACTACATCCGATCGAGAAGGTGGCCATCCCGATGCATACGCTTCACGTTGACCATTTAGGCCCATTTGTAAAAACACGTAAAGGAAACTCGTATATACTAGTTGTTATAGATTCGTTCACAAAGTTTGTATTTGCAAAACCTGTCAAAAGTTGTAGTTCCATGGAAACTATAAAACAATTGAAAGATATCATTTCGCAGTTTGGAAATCCTAACAGGATTATTACAGATAGAGGCAAAGCGTTTACTAGCCGGTATTTCAAACAATTTTCAGAAGAAATGCAATTTAAACATATTTTGAATGCCATTGCCAGTCCTAGGTCGAATGGCCAAGTAGAACGGGTAAATCGAACTTTGATTAACGGATTGAACACTATGTCTAATAGCGAATGCACCTGGGATGATCACCTAATTGATATAGTTTGGGGCATTAATAACACTCCTCACGCAATTACTGGTTTTGCTCCTTTTAAGTTATTATTTGGGCATCCCAATTCGCGCTTACCGGCATACCCTACTGGAGAACCCAATGACTTCGAAAGTCAAGCGAAAGCGTTAGAAGAAAGGCGAAACGCGGCTAAATTGAGTATTGACAAACATAGGACACTTATGAAGGATAGGTTTGATCGATCTCATAAGAAATGCATTAAGTACTCGGTGGGACAACTGGTACTTTGGAAAGGGGGAATAACCAGAGAAAGCGCTAATATAACTAGGAAACTTAACGGGTTGTATACAGGACCCTATAGGGTATGCAAAGCAGAACAGTCGTTAGATCGCTATACTATATGTAGTATTAAAGGCATGAAAGGTTATCGAAAATTTACTGCTGTTGTTCGCGGTGAAGTCCTCCGACCTTACAAATCTTCCATTTCCGACGATAGCAGTGGCAGTGACCATGAGGTTGATAGAGATGATTTGATAGACTTATTAGAGAGTTGA

Protein

MILDQSTDEELHLSDIDIGDLERNDCSRLLRLLNKYRHLFAKNTKDLGCTDILEMHIQTKTEQPVFCKPYRLSHKENEIVNEKVQDLIDAGVIRNSMSDYASPVVLVKKKGGDYRLCIDYRALNARTIKDRYPLPHIDDQVSRLSGKSFFTTLDLAQSYYQINLSKDSIHKTAFVTPSGQYEFLKMPFGLANAPAVFSRLIKIVLGSLGNDVATYLDDVMLPTTSVDDGLKLLDNVLKLLSEANLKLNLSKCSFLKRSVNYLGHEITAGTVRPGQAKISCVSEYRRPRNVHEIRQFIGLSSYFRKFIRGFAEIARPLTQLTKKDVQWTWGSAQETAFQTLKERLVERPVLGIYDRNARTELHTDASKLGLGGILLQYQSDGVLKPIAYFSRVTSKEEQFYHSYELETLAVVDSLKRFRVYLVGVPVTVVTDCAALRTTLVKKDLIPRIARWWLSIQDYDLQIEYRSGSRMRHVDALSRNPVQDSVLFIDNSDWLVTLQLQDESIQSLLTQLRNGTDNQNIISNYAIKDNILYRKTINGDRFVIPKLAKWGLLQKFHDQIGHVGFDKCEKTIKAQFWFEGMTRFIRKYIKSCLQCAYGKGEHGKLQGELHPIEKVAIPMHTLHVDHLGPFVKTRKGNSYILVVIDSFTKFVFAKPVKSCSSMETIKQLKDIISQFGNPNRIITDRGKAFTSRYFKQFSEEMQFKHILNAIASPRSNGQVERVNRTLINGLNTMSNSECTWDDHLIDIVWGINNTPHAITGFAPFKLLFGHPNSRLPAYPTGEPNDFESQAKALEERRNAAKLSIDKHRTLMKDRFDRSHKKCIKYSVGQLVLWKGGITRESANITRKLNGLYTGPYRVCKAEQSLDRYTICSIKGMKGYRKFTAVVRGEVLRPYKSSISDDSSGSDHEVDRDDLIDLLES

Uniprot

A0A1Y1KFN9   A0A1Y1KFM9   A0A194R1L3   A0A139WIQ0   A0A139WJA1   A0A0J7KEC9   + More
A0A139WIB9   A0A0C9RXL6   A0A139WCC5   A0A139WCG2   A0A147BLC5   T1PMR9   A0A034WRX5   A0A034W795   A0A2S2QIS3   A0A1Y1NEJ5   A0A034VPR8   A0A0F6Q721   A0A0A9X1Z8   A0A146M2J2   X1XTW9   A0A0J7K9X8   B7S8P8   A0A147BTY1   A0A1Y1MFA9   A0A0A9Z954   J9JJ45   A0A0J7K890   A0A1Y1MFE0   X1XU42   X1X5H2   A0A2S2P032   X1WPP0   A0A023EZG2   A0A023EYH9   A0A023EY26   J9JP73   A0A2S2PGQ9   A0A2L2Y1Z9   W8C8Q1   A0A1Y1LN89   A0A2S2NFQ4   A0A1Y1NG42   A0A2L2Y1I8   J9JZ77   A0A2L2Y402   A0A224XHR1   J9LBS9   A0A1W7R6G2   A0A2S2PD17   A0A2S2PFS2   A0A1W7R6L8   X1XM84   J9JQ65   A0A0A9WJJ8   J9LCJ4   A0A0J7NF11   A0A2S2QTC7   A0A3S3PAR0   J9L2R5   A0A2S2NKJ2   A0A1Y1NAV9   A0A0J7KLK4   X1XD76   A0A1W7R6G1   X1XU38   D2A5M1   A0A2A4J7U9   A0A2S2P946   X1XU22   A0A034VKV9   A0A0A1XB16   A0A139WPM1   A0A2S2PH69   A0A2S2P2K5   A0A2H8TRV6   X1XU14   W8APB2   Q94885   W8B0V9   A0A023F013   A0A1W7R6R7   A0A023EYF0   A0A2M4AI73   A0A034VLR3   A0A2M3Z5R3   A0A2M4CKM2   A0A164P0I2   A0A2S2PMX3   A0A0J7KQI5   A0A0A1WKC8   J9K875   A0A2S2QVZ0   A0A2M4AEU2   A0A2S2N9B2   A0A1W7R6H1   A0A034VAM6  

Pubmed

28004739    26354079    18362917    19820115    29652888    25348373    + More
26085165    25401762    26823975    25474469    26561354    24495485    25830018    3007285    8535278   

EMBL

GEZM01089268    GEZM01089261    JAV57577.1    GEZM01089269    GEZM01089265    JAV57567.1    + More
KQ460883    KPJ11409.1    KQ971338    KYB27888.1    KYB27887.1    LBMM01008871    KMQ88569.1    KQ971339    KYB27733.1    GBYB01013920    JAG83687.1    KQ971370    KYB25609.1    KYB25610.1    GEGO01004299    JAR91105.1    KA649989    AFP64618.1    GAKP01001563    JAC57389.1    GAKP01008942    JAC50010.1    GGMS01008442    MBY77645.1    GEZM01005427    JAV96179.1    GAKP01014483    JAC44469.1    KP706795    AKD28027.1    GBHO01030786    JAG12818.1    GDHC01004980    JAQ13649.1    ABLF02009922    LBMM01010976    KMQ87102.1    EF710649    ACE75273.1    GEGO01001472    JAR93932.1    GEZM01033083    JAV84424.1    GBHO01040010    GBHO01001812    JAG03594.1    JAG41792.1    ABLF02008401    ABLF02008404    LBMM01011782    KMQ86633.1    GEZM01034557    JAV83728.1    ABLF02018880    ABLF02004401    ABLF02013544    ABLF02013550    GGMR01009949    MBY22568.1    ABLF02033943    ABLF02042737    GBBI01004551    JAC14161.1    GBBI01004550    JAC14162.1    GBBI01004477    JAC14235.1    ABLF02016992    ABLF02061642    GGMR01016004    MBY28623.1    IAAA01004056    LAA02037.1    GAMC01007326    JAB99229.1    GEZM01051217    GEZM01051215    JAV75083.1    GGMR01003388    MBY16007.1    GEZM01007614    GEZM01007613    GEZM01007612    JAV95056.1    IAAA01004058    LAA02042.1    ABLF02014660    ABLF02042774    IAAA01004057    LAA02040.1    GFTR01008753    JAW07673.1    ABLF02041876    GEHC01000888    JAV46757.1    GGMR01014665    MBY27284.1    GGMR01015682    MBY28301.1    GEHC01000930    JAV46715.1    ABLF02004526    ABLF02054969    ABLF02005846    GBHO01036023    GBHO01032007    JAG07581.1    JAG11597.1    ABLF02009474    LBMM01005919    KMQ91095.1    GGMS01011700    MBY80903.1    NCKU01005292    RWS04750.1    ABLF02008946    GGMR01005091    MBY17710.1    GEZM01007616    GEZM01007615    GEZM01007611    JAV95051.1    KMQ91096.1    ABLF02022032    GEHC01000891    JAV46754.1    ABLF02024793    KQ971345    EFA05054.2    NWSH01002797    PCG67520.1    GGMR01013358    MBY25977.1    ABLF02017401    GAKP01016235    JAC42717.1    GBXI01005773    JAD08519.1    KQ971307    KYB29884.1    GGMR01015939    MBY28558.1    GGMR01011041    MBY23660.1    GFXV01005120    MBW16925.1    ABLF02003120    ABLF02004015    ABLF02057179    ABLF02066208    GAMC01020207    JAB86348.1    X95908    CAA65152.1    GAMC01015907    JAB90648.1    GBBI01004613    JAC14099.1    GEHC01000880    JAV46765.1    GBBI01004549    JAC14163.1    GGFK01007168    MBW40489.1    GAKP01016237    JAC42715.1    GGFM01003105    MBW23856.1    GGFL01001689    MBW65867.1    LRGB01002748    KZS06406.1    GGMR01018192    MBY30811.1    LBMM01004291    KMQ92598.1    GBXI01015151    JAC99140.1    ABLF02002940    ABLF02002941    ABLF02002942    ABLF02048237    ABLF02057838    ABLF02061919    ABLF02067277    GGMS01012726    MBY81929.1    GGFK01005990    MBW39311.1    GGMR01000717    MBY13336.1    GEHC01000876    JAV46769.1    GAKP01019383    JAC39569.1   

Proteomes

UP000053240    UP000007266    UP000036403    UP000007819    UP000285301    UP000218220    + More
UP000076858   

PRIDE

Q94885   

Pfam

PF17919   RT_RNaseH_2        + More
PF17921   Integrase_H2C2
PF00665   rve
PF00078   RVT_1
PF00098   zf-CCHC
PF14392   zf-CCHC_4
PF17917   RT_RNaseH
PF07530   PRE_C2HC
PF03273   Baculo_gp64
PF02037   SAP
PF09668   Asp_protease
PF03732   Retrotrans_gag
PF00077   RVP
PF13873   Myb_DNA-bind_5
PF13359   DDE_Tnp_4
PF16087   DUF4817
PF12384   Peptidase_A2B
PF16064   DUF4806

Interpro

IPR021109   Peptidase_aspartic_dom_sf        + More
IPR000477   RT_dom       
IPR041588   Integrase_H2C2       
IPR036397   RNaseH_sf       
IPR001584   Integrase_cat-core       
IPR041577   RT_RNaseH_2       
IPR036875   Znf_CCHC_sf       
IPR012337   RNaseH-like_sf       
IPR001878   Znf_CCHC       
IPR025836   Zn_knuckle_CX2CX4HX4C       
IPR034122   Retropepsin-like_bacterial       
IPR001995   Peptidase_A2_cat       
IPR001969   Aspartic_peptidase_AS       
IPR041373   RT_RNaseH       
IPR004955   Baculovirus_Gp64       
IPR006579   Pre_C2HC_dom       
IPR003034   SAP_dom       
IPR036361   SAP_dom_sf       
IPR019103   Peptidase_aspartic_DDI1-type       
IPR005162   Retrotrans_gag_dom       
IPR018061   Retropepsins       
IPR028002   Myb_DNA-bind_5       
IPR027806   HARBI1_dom       
IPR032135   DUF4817       
IPR024650   Peptidase_A2B       
IPR032071   DUF4806       
IPR011764   Biotin_carboxylation_dom       

SUPFAM

SSF57756   SSF57756        + More
SSF53098   SSF53098       
SSF50630   SSF50630       
SSF68906   SSF68906       

Gene 3D

2.40.70.10     3.30.420.10     1.10.720.30    

CDD

cd05483  retropepsin_like_bacteria

ProteinModelPortal

A0A1Y1KFN9   A0A1Y1KFM9   A0A194R1L3   A0A139WIQ0   A0A139WJA1   A0A0J7KEC9   + More
A0A139WIB9   A0A0C9RXL6   A0A139WCC5   A0A139WCG2   A0A147BLC5   T1PMR9   A0A034WRX5   A0A034W795   A0A2S2QIS3   A0A1Y1NEJ5   A0A034VPR8   A0A0F6Q721   A0A0A9X1Z8   A0A146M2J2   X1XTW9   A0A0J7K9X8   B7S8P8   A0A147BTY1   A0A1Y1MFA9   A0A0A9Z954   J9JJ45   A0A0J7K890   A0A1Y1MFE0   X1XU42   X1X5H2   A0A2S2P032   X1WPP0   A0A023EZG2   A0A023EYH9   A0A023EY26   J9JP73   A0A2S2PGQ9   A0A2L2Y1Z9   W8C8Q1   A0A1Y1LN89   A0A2S2NFQ4   A0A1Y1NG42   A0A2L2Y1I8   J9JZ77   A0A2L2Y402   A0A224XHR1   J9LBS9   A0A1W7R6G2   A0A2S2PD17   A0A2S2PFS2   A0A1W7R6L8   X1XM84   J9JQ65   A0A0A9WJJ8   J9LCJ4   A0A0J7NF11   A0A2S2QTC7   A0A3S3PAR0   J9L2R5   A0A2S2NKJ2   A0A1Y1NAV9   A0A0J7KLK4   X1XD76   A0A1W7R6G1   X1XU38   D2A5M1   A0A2A4J7U9   A0A2S2P946   X1XU22   A0A034VKV9   A0A0A1XB16   A0A139WPM1   A0A2S2PH69   A0A2S2P2K5   A0A2H8TRV6   X1XU14   W8APB2   Q94885   W8B0V9   A0A023F013   A0A1W7R6R7   A0A023EYF0   A0A2M4AI73   A0A034VLR3   A0A2M3Z5R3   A0A2M4CKM2   A0A164P0I2   A0A2S2PMX3   A0A0J7KQI5   A0A0A1WKC8   J9K875   A0A2S2QVZ0   A0A2M4AEU2   A0A2S2N9B2   A0A1W7R6H1   A0A034VAM6  

PDB

4OL8     E-value=1.16975e-67,     Score=655

KEGG

NA   

GO

GO:0003676   GO:0008270   GO:0015074   GO:0004190   GO:0005634   GO:0019048   GO:0003964   GO:0016021   GO:0043565   GO:0005737   GO:0005488   GO:0022891   GO:0003707   GO:0051537  

Length:

919

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0196099999999999

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00072

outside

1  -  919

 

 

Pi

225.24064

Theta

200.505672

Tajima's D

3.080134

CLR

9.254042

CSRT

0.981550922453877

Interpretation

Uncertain