Gene

KWMTBOMO07637

Pre Gene Modal

BGIBMGA012989

Annotation

Yokozuna_[Bombyx_mori]

Location

Bomo_Chr13(+):2417641-2421869      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.761

CDS

ATGGGCCCAGAGTACCCAAAGTGCCTAGAAATTTCGCAAGAGGTAGCGTCAAGTGGCGTTATAGAATTAAAACAAAAAACTGCTGATGCGGCTGCAAAAGCCTTAATAGTAAAATGTGTACCCGATAAGTACTTGGACATCATAAAAGATGCAACAACTAGCTACACAATGTTAGCCAGTCTGGATAAAGTTTTTGAGAGAAAAGGTATTTTCACTAAATTACACTTGCGAAGAAAGTTATTGTCTCTTAAGCTGAGGGATGATAAATTGGAAGACTATTTCATGAGATTTGAAAGTCTGATTAGAGAAATAGAAAATATTGATAAAAAGATGGATGAAGAAGATAAAATATGTTATTTGCTGACGGGTATGTCGGAAAAGTACAACACAGTGATAACTGCTATTGAAACAATGTCTGCAGATAAAATTGACATGGAGTTTGTCAAGGCTCGGTTATTGGACGAAGAACTCAAACTGAATAATAAAGGTGAAGAGTATAATGATACAAAGAATGATGTAAGTTTTACTGCCTCAAGTGTAGAATGTTATCGTTGCCACAAAAAGGGCCATTTTGCACGTGAATGTAGAAGCAGAGGTCGTGGCTATTCAAGGAGAAACATTAATGATAAAGGTATATGTGGTAAAAACAGAACTGAAGAACAAAATAATATGACAGAAAGCATCCCAGAGAATAAATATAATTTTCTAGCAATAACGGAGTGTAATCTAAGTAAAGAAGACAAATTTATAGAATTTATAATAGATTCAGGAGCTACAGAAAATCTTATCAAGGAAGAATTGGAGAAATACATGTATGAAATTAAGAAACTACCAAATAAAATAAAAATTAAGATTGCAAATGGAGAAATATTAGAGGCTGACAAGAAAGGAAAGATAACCATAAGAGATAAAAATAATAATACTATAAATATAGAAGCGTTAATGGTCCCAGGGATTTATCATAATATAATATCTGTAAGAAACTTAAATATGAAAGGAAATAAAGTTGTTTTTACAAAATTTGGAGCACAAATAATAAATGGAAGAAAAGTCTTAAAATGTTCAGATAGAAATGGTTTATATATAGTACAAGGCGAAATAATACTAATAGAAGAAGCGAACTCAAGTGTACAGCAAGACAAAAATATTTGGCACCAACGTCTCGGACACTTAAATAGGAAATCATTAAAAATTATGGGTTTACCTGTGTCTGATGAAACATGTGGTCCTTGCATGAAGGGAAAATCTACTCGTTTACCATTCTATCCAGTTGACAGGCCAAGAAGTAGAAAAATAGGAGAATTATTGCATACAGATATTGGAGGTCCTGTATCACCAATTTCTTATGATGAAAAACAATATTACCAGACCATAACTGATGATTTTTCTCATTTTGTGACTGTTTATCTATTAAAGAATAAATCTGAAGCCACAAGAAATTTAATAAATCATATAAAGGAGTTAGAAAGACAAAAGGAAACTAAAGTTAAACGCATAAGATGTGATAATGGTGGAGAGTTCACCGCTGGCTGTTTGAAGCAATTTTGTATGGAAAATGGAATTATAATAGAGTATAGTCAACCTTACACACCACAACAAAATGGTGTGGCAGAGAGGCTAAACAGAACATTACTAGATAAGTCAAGAACTTTATTAAGTGAAACTGGATTACCTAAATATTTGTGGTCTGAGGCTATAATGTGTGCAGCATATCAATTGAATCGATGCCCATCAAGATCTATAAAGTATAAGATACCAGCTGAAATATACTACGGACTAGAAAATGTTAACTTGAACAAGTTAAAGGTATTTGGTTCTAAAGCATGGTATACGTGTGTCCCACAGAATAAGAAATTAGATAATAGAGCTGAAGAAGCCATTATGGTTGGCTATGGCAAACAAGGTTATAGATTATGGAATCCAAAAACAACAGAAATAATATTCTGCAGAGATGTCAAGTTTGATGAAAAGTACTATGAACATAAAAACAGTATTAAAAATAACAACTATATTTATTTACCAGAAGAGGACACACAAAATGAAGTTATGTGCAATGATAAAAATAAAATTGAGGAAGAAAAAGTAATACAGAAAAATGAAGAGACAGACACAAAAAGAACTAGATCAGGAAGGATAATAAAGCAACCTGATTATCTAAAGAATTTTGGGACGTACACAGCATATTGTTACTTAGTGTGTAATGACCCAGAAAGCTATGAAGAAGCGATAAAAGAAGTTTCATGGAAAGAAGCGATACATAAGGAATTAGCAGCACTTGAGAACTTACAAAGCTGGGAAGAGACTAAACTACCGAAAGGAAAATTAGCTATAGACACTAAGTGGGTTTTTAGAACGAAAGACGATGGCACTAAGAAAGCCAGATTAGTCGCTCGAGGTTTTCAAATAAAAAATTATGAGAATGAAATATTCTACAGTCCTGTAGTAAGAATGTCTACGATAAGAGCATTTTTTGTAAAAGCTATCCAAGAAGGATACAAATTAAGGCAATTGGATATTCCTACAGCCTTTCTCAATGGATTTCTTGATAGTGAAGTTTATATAAAAATACCCAAAGGCAAAGAAAACAAAGATGGAATAGTTTTGAGGTTAAAGAGAGCATTGTATGGATTAAAAGAAAGCCCTAAATGCTGGAACATGAGATTTGATGAATTTGCAAGAAAGAATGGATTGATACAGATACAGAAAAAAATTATTAATAAATTGAAGCAAGAATTTAAAGCTAAAGATTTAGGACAGATTGAGAAATATCTTGGTATGGAAATTAAACAGGAAGAAAGTAAATTAACGATTAAACAAGAAAAGATAATTGAGAAGATACTAGAAAAATTTGGAATGTCAGAATGTAAAGGTATAGGAACACCTATGGAGGTAAATTTTCAAATAAACAAAAATGAGAAGATTATTGATGTACCATATCGACAACTCATAGGAAGCATAATGTATTTGGCTACTATGTCCAGACCAGATCTGCAGTTTGCTGTATCATATCTTAGCAGATACCTAGACTGTCCTACTCAACAGACTTGGAAAGCTGGAAAGAGAATTCTGCAATACCTAAAAGCTACAAAAGACAAAATGTTAGTTTTTCAAAAAAGGAATAATCTAGATGTGGATTTATGTGCATATTCAGACTCTGATTGGGCAGGTGATATTGTTGATCGCAAAAGTGTCAGTGGGGGTATCATAATGTGTAGTGATAATCCTGTATTTTGGTACTCTAGAAAACAAAGTTGTGTTGCATTATCGACAGCAGAATCAGAGTACATTGCTAGTGCTTGTTGTGCTCAAGAGTTAGTGTATTTGAAAGGTGTACTGTGTGATTTTGGATATGAATGTAAATTGACTTTATTTATGGATAATAAGGGAGCAATATGTTTAGCGAAGTCAAATGAAAACTCTAAAAGGAGTAAGCATATTGATATAAGGATGCACTATATTAAGGACTTGGTGAGGAATAATGTATTAGATATTGAATATGTGTCATCTGATAAAAATATTGCTGATATTTGTACAAAATCTTTATGCAAAGAAAAGTTTGTATTTTTTAGAAGTTTGTTACTAAAGTAA

Protein

MGPEYPKCLEISQEVASSGVIELKQKTADAAAKALIVKCVPDKYLDIIKDATTSYTMLASLDKVFERKGIFTKLHLRRKLLSLKLRDDKLEDYFMRFESLIREIENIDKKMDEEDKICYLLTGMSEKYNTVITAIETMSADKIDMEFVKARLLDEELKLNNKGEEYNDTKNDVSFTASSVECYRCHKKGHFARECRSRGRGYSRRNINDKGICGKNRTEEQNNMTESIPENKYNFLAITECNLSKEDKFIEFIIDSGATENLIKEELEKYMYEIKKLPNKIKIKIANGEILEADKKGKITIRDKNNNTINIEALMVPGIYHNIISVRNLNMKGNKVVFTKFGAQIINGRKVLKCSDRNGLYIVQGEIILIEEANSSVQQDKNIWHQRLGHLNRKSLKIMGLPVSDETCGPCMKGKSTRLPFYPVDRPRSRKIGELLHTDIGGPVSPISYDEKQYYQTITDDFSHFVTVYLLKNKSEATRNLINHIKELERQKETKVKRIRCDNGGEFTAGCLKQFCMENGIIIEYSQPYTPQQNGVAERLNRTLLDKSRTLLSETGLPKYLWSEAIMCAAYQLNRCPSRSIKYKIPAEIYYGLENVNLNKLKVFGSKAWYTCVPQNKKLDNRAEEAIMVGYGKQGYRLWNPKTTEIIFCRDVKFDEKYYEHKNSIKNNNYIYLPEEDTQNEVMCNDKNKIEEEKVIQKNEETDTKRTRSGRIIKQPDYLKNFGTYTAYCYLVCNDPESYEEAIKEVSWKEAIHKELAALENLQSWEETKLPKGKLAIDTKWVFRTKDDGTKKARLVARGFQIKNYENEIFYSPVVRMSTIRAFFVKAIQEGYKLRQLDIPTAFLNGFLDSEVYIKIPKGKENKDGIVLRLKRALYGLKESPKCWNMRFDEFARKNGLIQIQKKIINKLKQEFKAKDLGQIEKYLGMEIKQEESKLTIKQEKIIEKILEKFGMSECKGIGTPMEVNFQINKNEKIIDVPYRQLIGSIMYLATMSRPDLQFAVSYLSRYLDCPTQQTWKAGKRILQYLKATKDKMLVFQKRNNLDVDLCAYSDSDWAGDIVDRKSVSGGIIMCSDNPVFWYSRKQSCVALSTAESEYIASACCAQELVYLKGVLCDFGYECKLTLFMDNKGAICLAKSNENSKRSKHIDIRMHYIKDLVRNNVLDIEYVSSDKNIADICTKSLCKEKFVFFRSLLLK

Uniprot

O96968   A0A146L6N5   A0A0A9XG27   A0A146KTS1   A0A0A9Z0I6   A0A1B6DFK3   + More
A0A0A9WLY1   A0A146LV28   A0A1Y1L115   A0A1Y1MQF0   A0A0A9ZBW6   A0A224XA26   A0A182GA29   A0A182H4X3   A0A0T6AT79   A0A1W7R6I5   A0A023F102   J9KJ72   A0A068B703   A0A182GGE6   A0A182G1G7   A0A151RCT9   A0A151TPU3   A0A151RPT4   A0A151TGP0   A0A1Y1MJE9   A0A1B6C2D3   A0A0J7K6U3   Q9C739   A0A2N9IUL9   A0A2N9JB15   Q9SXB2   A0A2N9GX95   Q9C536   A0A151TNK0   A0A0A9W6B0   Q9M2D1   A0A2N9GHK9   A0A1W7R6A3   A0A151QNH5   A0A151T469   A0A151RAL1   A0A151TMN9   Q9LH44   A0A0N1ICY1   A0A224XJ98   A0A151QZS0   A0A2N9F1W0   A0A2N9GHB5   Q967L5   A0A2K3MZ63   A0A2P6P744   A0A194RJV9   A0A2Z6N0M9   A0A151R6U8   A0A2K3N1R3   A0A0A9XEU3   A0A087SVE4   A0A059QBK0   B8YLY6   A0A151TIH6   A0A061F3M7   B8YLY4   A5B9M8   A0A151S6I6   B8YLY3   A0A151RBY1   A0A2N9ESI4   A0A151R2G6   A0A2N9J3Y8   A0A2K3NXK0   A0A2R6RYD4   A0A2Z6NRJ0   A0A2N9HHD8   A0A2N9IPG8   A0A151TKT1   A0A2N9FNY4   A0A151SDY6   A0A2N9I1L5   A0A151SHZ9   A0A151RJN4   A0A2N9ICE2   A0A2N9H9R9   B8YLY5   A5AS37   A0A2A4J959   A0A396IZR1   Q6L3N8   A0A151QNH6   A0A034VP82   A0A146LT61   A0A251VAZ6   A0A2N9IKI1   A5B5N4   A0A392M193  

Pubmed

10333565    26823975    25401762    28004739    26483478    25474469    + More
22057054    10907853    26354079    11319273    24500806    28382043    24046770    19656907    23731509    29661190    30397259    25348373    28538728    29922311   

EMBL

AB014676    BAA74713.1    GDHC01015802    JAQ02827.1    GBHO01027564    JAG16040.1    + More
GDHC01019310    JAP99318.1    GBHO01004832    JAG38772.1    GEDC01012841    GEDC01000503    JAS24457.1    JAS36795.1    GBHO01035173    JAG08431.1    GDHC01007058    JAQ11571.1    GEZM01072005    JAV65635.1    GEZM01028916    JAV86196.1    GBHO01002761    JAG40843.1    GFTR01008662    JAW07764.1    JXUM01155348    KQ572178    KXJ68066.1    JXUM01025857    KQ560736    KXJ81076.1    LJIG01022881    KRT78250.1    GEHC01000878    JAV46767.1    GBBI01004033    JAC14679.1    ABLF02041793    KF740825    AIC77183.1    JXUM01011189    KQ560325    KXJ83029.1    JXUM01136904    KQ568499    KXJ68982.1    KQ483843    KYP40337.1    CM003606    KYP69041.1    KQ483623    KYP44533.1    CM003608    KYP66220.1    GEZM01032204    JAV84770.1    GEDC01029908    JAS07390.1    LBMM01012492    KMQ86193.1    AC073555    AAG60117.1    OIVN01006211    SPD27863.1    OIVN01006466    SPD33659.1    AC007259    AAD50001.1    OIVN01002473    SPD03944.1    AC079604    AC079131    AAG50698.1    AAG50765.1    KYP68607.1    GBHO01040663    JAG02941.1    AL137898    CAB71063.1    OIVN01001931    SPC99063.1    GEHC01000959    JAV46686.1    KQ485638    KYP31826.1    CM003610    KYP61818.1    KYP63036.1    KQ483890    KYP39660.1    KYP68287.1    AP002064    BAB01972.1    KQ460882    KPJ11482.1    GFTR01008327    JAW08099.1    KQ484324    KYP35753.1    OIVN01000486    SPC81000.1    OIVN01001906    SPC98838.1    AY009101    AAK12626.1    ASHM01014140    PNX96091.1    PDCK01000045    PRQ17740.1    KQ460297    KPJ16236.1    DF973299    GAU24969.1    KQ484038    KYP38095.1    ASHM01015075    PNX96991.1    GBHO01024362    JAG19242.1    KK112142    KFM56833.1    KF303287    AGW47867.1    FJ544856    ACL97386.1    KYP66838.1    CM001883    EOY11267.1    FJ544853    ACL97384.1    AM451478    CAN80930.1    KQ483456    KYP50361.1    FJ544851    ACL97383.1    KQ483853    KYP40164.1    OIVN01000279    SPC77544.1    KQ484186    KYP36645.1    OIVN01006353    SPD31284.1    ASHM01002084    PNY07765.1    NKQK01000002    PSS35035.1    DF973742    GAU39052.1    OIVN01003431    SPD11153.1    OIVN01006155    SPD26398.1    CM003607    KYP67664.1    OIVN01001308    SPC92446.1    KQ483417    KYP53032.1    OIVN01004651    SPD18552.1    CM003613    KYP54398.1    KQ483702    KYP42748.1    OIVN01005669    SPD23557.1    OIVN01003424    SPD11127.1    FJ544854    ACL97385.1    AM433482    CAN69340.1    NWSH01002292    PCG68657.1    PCG68658.1    PSQE01000003    RHN71246.1    AC149291    AAT38758.1    KQ485623    KYP31853.1    GAKP01015342    JAC43610.1    GDHC01007678    JAQ10951.1    CM007892    OTG31811.1    OIVN01002424    OIVN01005946    SPD03496.1    SPD24589.1    AM447500    CAN74198.1    LXQA010000987    MCH80374.1   

Proteomes

UP000069940    UP000249989    UP000007819    UP000075243    UP000036403    UP000053240    + More
UP000236291    UP000238479    UP000054359    UP000026915    UP000241394    UP000218220    UP000265566    UP000215914   

PRIDE

O96968   

Pfam

PF00665   rve        + More
PF07727   RVT_2
PF13976   gag_pre-integrs
PF00098   zf-CCHC
PF13961   DUF4219
PF13358   DDE_3

Interpro

IPR036397   RNaseH_sf        + More
IPR039537   Retrotran_Ty1/copia-like       
IPR001584   Integrase_cat-core       
IPR013103   RVT_2       
IPR012337   RNaseH-like_sf       
IPR001878   Znf_CCHC       
IPR036875   Znf_CCHC_sf       
IPR021109   Peptidase_aspartic_dom_sf       
IPR025724   GAG-pre-integrase_dom       
IPR025314   DUF4219       
IPR038717   Tc1-like_DDE_dom       

SUPFAM

SSF53098   SSF53098        + More
SSF57756   SSF57756       

Gene 3D

3.30.420.10     2.40.70.10    

ProteinModelPortal

O96968   A0A146L6N5   A0A0A9XG27   A0A146KTS1   A0A0A9Z0I6   A0A1B6DFK3   + More
A0A0A9WLY1   A0A146LV28   A0A1Y1L115   A0A1Y1MQF0   A0A0A9ZBW6   A0A224XA26   A0A182GA29   A0A182H4X3   A0A0T6AT79   A0A1W7R6I5   A0A023F102   J9KJ72   A0A068B703   A0A182GGE6   A0A182G1G7   A0A151RCT9   A0A151TPU3   A0A151RPT4   A0A151TGP0   A0A1Y1MJE9   A0A1B6C2D3   A0A0J7K6U3   Q9C739   A0A2N9IUL9   A0A2N9JB15   Q9SXB2   A0A2N9GX95   Q9C536   A0A151TNK0   A0A0A9W6B0   Q9M2D1   A0A2N9GHK9   A0A1W7R6A3   A0A151QNH5   A0A151T469   A0A151RAL1   A0A151TMN9   Q9LH44   A0A0N1ICY1   A0A224XJ98   A0A151QZS0   A0A2N9F1W0   A0A2N9GHB5   Q967L5   A0A2K3MZ63   A0A2P6P744   A0A194RJV9   A0A2Z6N0M9   A0A151R6U8   A0A2K3N1R3   A0A0A9XEU3   A0A087SVE4   A0A059QBK0   B8YLY6   A0A151TIH6   A0A061F3M7   B8YLY4   A5B9M8   A0A151S6I6   B8YLY3   A0A151RBY1   A0A2N9ESI4   A0A151R2G6   A0A2N9J3Y8   A0A2K3NXK0   A0A2R6RYD4   A0A2Z6NRJ0   A0A2N9HHD8   A0A2N9IPG8   A0A151TKT1   A0A2N9FNY4   A0A151SDY6   A0A2N9I1L5   A0A151SHZ9   A0A151RJN4   A0A2N9ICE2   A0A2N9H9R9   B8YLY5   A5AS37   A0A2A4J959   A0A396IZR1   Q6L3N8   A0A151QNH6   A0A034VP82   A0A146LT61   A0A251VAZ6   A0A2N9IKI1   A5B5N4   A0A392M193  

PDB

5UOQ     E-value=2.75137e-07,     Score=135

KEGG

NA   

GO

GO:0000943   GO:0015074   GO:0008270   GO:0003676   GO:0004491   GO:0003964   GO:0005886   GO:0009555   GO:0004519   GO:0016021   GO:0004190   GO:0006508   GO:0005737   GO:0005488   GO:0022891   GO:0003707   GO:0051537  

PANTHER

PTHR11439  

Length:

1195

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00465999999999999

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00020

outside

1  -  1195

 

 

Pi

153.613279

Theta

164.190254

Tajima's D

-1.261702

CLR

129.351986

CSRT

0.0920953952302385

Interpretation

Uncertain