SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07636
Pre Gene Modal
BGIBMGA001297
Annotation
hypothetical_protein_KGM_21537_[Danaus_plexippus]
Location in the cell
Nuclear   Reliability : 3.032
 

Sequence

CDS
ATGAAGCCGGGAAAGAGTTCTGATGAGAAGGAGGAAATAGTAGAAGTACACTCGAGTGCACGCTCACCCTCTCCTAAACACAAAAACAAACAGAGACAACGAAGCAGTTCTGGATCTAGAAAACTATCAAACGGTCACGCTATTGAACCTGAAAATACAGAAACGGTGGAAACACCAGAGAAGTCCAAGCGAGGTAGCTGGATTAAATCCGAACACGAATCTTTGGACACTGAGCTTCCTATACACGATCAAATCAAGCAGGATATTCTAGGCTTTGTCGAGAAGGAAATTAAGAAATCTGACAAGAATCCGTCGTTTGTATTTTATTCTCACGATCCAAATGGTTTGGATGAAAAGTTTCTGAAGTCACTGTCCCGTCCGTCAAGTGGACATAAGGAAAAACGTAGTCCATCATACAGGAAAAAAAAGAGACATTCCTCAAGGCATAGAGATCGCGATCTACATGATTTTGAAATACCAGGCTCCAGTCTAAGTGCATTGGAAAAGGTGGATGATTATTTAAAAGAGTACAATAAAGATGAAGTAGTAACACTCAGCGGTGAATTGGAAATTGAACATAATGATTTTGAGAACAATAACGGCACGTCAAAAGATATCCGCCACAAACCTCGCAAGACAAAAAGAAAATCTAGAGACGAGAGACGAGATACTAATGCTAATGGTAGAGATGTAAGCCCTAAGGTTTTCAAGACTGGCTCTAAGTCAAAACAGGGAAAGTCAGTGAGACCGACGGACTTGTCTGCAATGCTACAAACCCTGGAATCCAGCATACCATACCATGAAGATTACATTGACAATCCATTTTCATCACCGTCTCCAGTTACATCACCGAATGATGAAAGGCTAGATCGATTTGGAGCTCGTCGTACTGAGAAGATATATCTTCAAGGTGGAGGTACATTCACTGCTGTGTCAAGAGATAGAATATTACAGCCTCAACGATCTAGAGATGGTGATAAATACTTAAGCTTAGCCGACCACACCCCACTAGATGTAGCCTTGATGCTTCAGAAAGCATGGAAGAGTTGTGCTGTGGCTTGTCACGGAGTACTCGGTGGATTGTCTTTGATGCATCTTCTCCTGATCGGCTATACTGATGGATTGGATGCTGGACATCTGTCCTTCCACTCCGTTGTAACAATGCCTTATGTCGCTGCATACTATTTCTTTTGCGTGTTGTGTCTTCTGTCTGTTTTGGATAGATTAGACATAGCAAGCTTGGATCTCAGTAGAGGTCTCCAACCCTACTTCCAGCCGATAGTTCTAGTCATACTATACATGGCCTGCCTACTGGTCTGCGCGGCTGCCAGGATGTACGATGAGCTGATGGTGTACCAGTACACGCCTCTGGTACACAACATCACCGGGAATCTTACCACACCAACCATACCGACCTTCTATCACACATGGACACACTTCTCCATATGGCGCGCGGTCCTGTCAGTCCTGGGCCTGGTCTACTTCGTGATATCCTCACCTGAGGACCTCGTCTACGCAAACATAAGCAAACTGTTACAGTTTAAACATTCGTTGCGCAGTATTGAATGA
Protein
MKPGKSSDEKEEIVEVHSSARSPSPKHKNKQRQRSSSGSRKLSNGHAIEPENTETVETPEKSKRGSWIKSEHESLDTELPIHDQIKQDILGFVEKEIKKSDKNPSFVFYSHDPNGLDEKFLKSLSRPSSGHKEKRSPSYRKKKRHSSRHRDRDLHDFEIPGSSLSALEKVDDYLKEYNKDEVVTLSGELEIEHNDFENNNGTSKDIRHKPRKTKRKSRDERRDTNANGRDVSPKVFKTGSKSKQGKSVRPTDLSAMLQTLESSIPYHEDYIDNPFSSPSPVTSPNDERLDRFGARRTEKIYLQGGGTFTAVSRDRILQPQRSRDGDKYLSLADHTPLDVALMLQKAWKSCAVACHGVLGGLSLMHLLLIGYTDGLDAGHLSFHSVVTMPYVAAYYFFCVLCLLSVLDRLDIASLDLSRGLQPYFQPIVLVILYMACLLVCAAARMYDELMVYQYTPLVHNITGNLTTPTIPTFYHTWTHFSIWRAVLSVLGLVYFVISSPEDLVYANISKLLQFKHSLRSIE

Summary

Pfam
PF15383   TMEM237
Interpro
IPR029409   TMEM237       

Ontologies

Topology

Length:
522
Number of predicted TMHs:
4
Exp number of AAs in TMHs:
84.02166
Exp number, first 60 AAs:
0
Total prob of N-in:
0.92760
inside
1  -  349
TMhelix
350  -  369
outside
370  -  383
TMhelix
384  -  406
inside
407  -  426
TMhelix
427  -  446
outside
447  -  479
TMhelix
480  -  497
inside
498  -  522
 
 

Population Genetic Test Statistics

Pi
242.37401
Theta
20.857698
Tajima's D
0.984151
CLR
0
CSRT
0.661016949152542
Interpretation
Uncertain
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