SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07617  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA001303
Annotation
PREDICTED:_tumor_suppressor_candidate_3_[Amyelois_transitella]
Location in the cell
PlasmaMembrane   Reliability : 4.506
 

Sequence

CDS
ATGAATTTCAAAGTATTATTGTTACTAACAATAACTATAACATACTATGAAGGAGCTGCGCAACCTCGAGCTAAAGGGATTGAGGAGAAAGTGCAGCAGTTGACTGATATTACAGCAAAGAAGTCTGTAATTCCATTAAACATAAATAAGTTTAAGGAATATGTGAAGTCTCCTCCAAGGGATTATTCATTTGTAGTGATGTTCACTGCAATGGCACCTGCAAGAAGGTGTGCTATCTGTCAGCATGTTAACGATGAATATTTGTTGGTGGCCAACTCATTTAGATTCTCAGCTGCTTACAATAATAAATTATTCTTTGGTATTGTTGATTTTGATGAAGGCTCAGATATCTTCCAAATGTTACGGCTTAATACTGCACCTGTGATAATGCACTTCCCAGCTAAAGGCAAACCTAAGCCTGCTGACACAATGGACTTTGAGAGAGCTGGCATCCATGCTGAGGCCATCGCTAAGTGGATACAGGACAGAACTGATGTACAGATTCGAGTCTTCCGATCACCAAATTACTCAGCGGCTGTAGCTTTTTCAACTCTCTTCATCATATTGGCTGGTTTTCTTTATATCCGTAGAAACAACCTCGAGTTCCTCTACAATAAACAGTTATGGGCAGTTTGTGCTGTGTTCTTCTGCTTTGCAATGGTGTCTGGGCAGATGTGGAATCAAATTAGAGGCCCACCATTTTTCCATAGAACAAAAACTGGCCCGGTCTATATAAACGGGGGATCACACGGACAGTTTGTATTGGAGAGTTACATTGTTGCTATACTGAATGGGGCTGTGGTTGTGGGTATGATCCTAATGATTGAAGCAGCAGGTGGAGTTAAAAACCATGACCCAACACGAACCCTGGCCGAAGGGAAGCGTCGAAGGTTCCAGTCAGTTGTTGGTCTAATATTAGTCTGCGTGTTCTTCTCACTGCTTTTATCAGTATTCAGAGCAAAGACGCAAGGATATCCATATAGTTTCTTGTTCAAGTGA
Protein
MNFKVLLLLTITITYYEGAAQPRAKGIEEKVQQLTDITAKKSVIPLNINKFKEYVKSPPRDYSFVVMFTAMAPARRCAICQHVNDEYLLVANSFRFSAAYNNKLFFGIVDFDEGSDIFQMLRLNTAPVIMHFPAKGKPKPADTMDFERAGIHAEAIAKWIQDRTDVQIRVFRSPNYSAAVAFSTLFIILAGFLYIRRNNLEFLYNKQLWAVCAVFFCFAMVSGQMWNQIRGPPFFHRTKTGPVYINGGSHGQFVLESYIVAILNGAVVVGMILMIEAAGGVKNHDPTRTLAEGKRRRFQSVVGLILVCVFFSLLLSVFRAKTQGYPYSFLFK

Summary

Similarity
Belongs to the insulin family.
EMBL
BABH01001468    BABH01001469    BABH01001470    BABH01001471    RSAL01000017    RVE52906.1    + More
ODYU01001899    SOQ38755.1    NWSH01000168    PCG78833.1    GAIX01004615    JAA87945.1    AK401629    BAM18251.1    GDQN01010314    JAT80740.1    AK402497    BAM19119.1    KQ461198    KPJ06073.1    KQ459606    KPI91083.1    AGBW02010668    OWR48077.1    AK417607    BAN20822.1    KQ971338    EFA01636.1    GBBI01000835    JAC17877.1    GEMB01003868    JAR99386.1    GFTR01005114    JAW11312.1    GECZ01017663    JAS52106.1    GECU01000331    JAT07376.1    NEVH01006721    PNF37128.1    GEBQ01031519    JAT08458.1    GECL01003695    JAP02429.1    PYGN01000298    PSN49006.1    ACPB03019965    GAHY01001335    JAA76175.1    GANO01002689    JAB57182.1    LJIG01022810    KRT78601.1    AAAB01008980    EAA13927.5    APCN01001654    CH477342    EAT43075.1    GBHO01040403    GDHC01006388    JAG03201.1    JAQ12241.1    AJWK01018369    DQ440030    ABF18063.1    GFDF01004261    JAV09823.1    GGFJ01007125    MBW56266.1    GGFK01002740    MBW36061.1    ADMH02001597    ETN61920.1    GGFM01006312    MBW27063.1    GGFM01001451    MBW22202.1    GAMD01000559    JAB01032.1    GGFK01002746    MBW36067.1    GEZM01023579    JAV88293.1    GGFL01004558    MBW68736.1    AXCM01000350    GBYB01001394    GBYB01001397    JAG71161.1    JAG71164.1    GGFL01000002    MBW64180.1    CP012523    ALC38903.1    GL453340    EFN76187.1    ADTU01007116    GAPW01002543    JAC11055.1    KK107250    EZA54360.1    KZ288254    PBC30763.1    DS231907    EDS45489.1    GFDL01009984    JAV25061.1    UFQT01000478    SSX24649.1    GL762730    EFZ20865.1    AE014134    AY075331    AAF52636.2    AAL68198.1    CM000361    CM002910    EDX04208.1    KMY89034.1    CH480818    EDW52111.1    NNAY01000009    OXU32073.1    CH963852    EDW75431.1    GAMC01005341    GAMC01005339    JAC01215.1    CH954177    EDV59332.1    GAKP01023430    JAC35528.1    GDHF01032626    GDHF01009869    JAI19688.1    JAI42445.1    GBXI01008783    JAD05509.1    CH379060    EAL33662.1    CH479180    EDW28833.1    OUUW01000004    SPP79808.1    CH933807    EDW11472.1    KQ982753    KYQ51174.1    CM000157    EDW88487.1    GL443762    EFN61646.1    CH902620    EDV31262.1    KPU73288.1    GL888375    EGI62041.1    CH940649    EDW64797.1    GDIP01117145    GDIQ01029894    GDIQ01002793    LRGB01002384    JAL86569.1    JAN64843.1    KZS07981.1    KQ979657    KYN19982.1    CVRI01000008    CRK88514.1    KQ976408    KYM91176.1    JXUM01016218    KQ560452    KXJ82352.1    GL732565    EFX77074.1    HQ896857    HQ896858    AEI98820.1    GFDG01000802    JAV17997.1    UFQT01000091    UFQT01000704    SSX19570.1    SSX26671.1    CCAG010021443    EZ422792    ADD19068.1   
Pfam
PF04756   OST3_OST6        + More
PF00049   Insulin
PF01875   Memo
Interpro
IPR036249   Thioredoxin-like_sf        + More
IPR021149   OligosaccharylTrfase_OST3/OST6       
IPR036438   Insulin-like_sf       
IPR022353   Insulin_CS       
IPR016179   Insulin-like       
IPR022352   Insulin_family       
IPR002737   MEMO1_fam       
SUPFAM
SSF52833   SSF52833        + More
SSF56994   SSF56994       
PDB
4M90     E-value=3.52378e-49,     Score=491

Ontologies

Topology

Subcellular location
Secreted  
SignalP
Position:   1 - 20,         Likelihood:  0.903454
 
 
Length:
332
Number of predicted TMHs:
4
Exp number of AAs in TMHs:
83.45755
Exp number, first 60 AAs:
0.10425
Total prob of N-in:
0.00659
outside
1  -  175
TMhelix
176  -  195
inside
196  -  207
TMhelix
208  -  226
outside
227  -  257
TMhelix
258  -  280
inside
281  -  300
TMhelix
301  -  320
outside
321  -  332
 
 

Population Genetic Test Statistics

Pi
20.933183
Theta
28.200749
Tajima's D
-1.154683
CLR
117.541804
CSRT
0.108644567771611
Interpretation
Uncertain
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