Gene

KWMTBOMO07614

Annotation

PREDICTED:_transmembrane_and_TPR_repeat-containing_protein_1-like_[Bombyx_mori]

Location

Bomo_Chr13(-):1523051-1542757      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 2.963

CDS

ATGAAATTCGAAAAGAAATGCACGGGTCTTTCAGTGCGGACCATTAAAGTTGTGGTGTCTTTGGCACTATTAGTGTGCTTCAGACTGGCACTATTGCAGGGGACGTGGCCAAGTTTTTCTCCTCAAGACAATCCAGCTGCTTTTCATCCCAGTTTCTTCGTCCGATTAATGACTTTTTGCTATCTGGCCGCCTTCAACTGGTGGCTGCTTCTTTGTCCGTGGACCTTGAGTCACGACTGGCAAATGGGTTCGGTTCCCCTCATCACCAGCGGATGGGATCCGAGGAACTTACTCACATGCGCCGCCTTTGGTGCTCTACTGCTTCTCTGCTACAGGTTTATTGCCGATTTGGAGGTTCAAAGACACACTCCTGCAGTAGTAGGGATGCTGCTACTAGTGATACCTTTCGTGCCTGCCAGTAACCTGCTGGTGACCGTCGGCTTTGTGATCGCTGAGCGAGTTCTTTACATACCCAGTGTGGGTAGCGTGATCATCACGGCGTATGGAGTTCAACTGATTTGGTACTCCAAGCCTGGTACTAAAGCGGTCCTGGTCATCGGCCTCGCTGTGTTAGCGGCCAGCGGAGTAGCTAGAACTTATAGAAGAAACGCTGACTGGCGGGACAGAGCCACGTTGTTGAGAACGGATTTAGTGACTTTACCGCAGAACGCCAAACTGCACTACAACTTGGGAAACTTCCTTAGGGAGTCTGAGCAGCAAGAAAGCGCCATCAAGCATTACAAAGAAGCTTTGAGGTTGTGGCCGACATACGCAAGCGCCCACAATAACATAGGAACCTTGGTCTCCGGGTTGGAGAATGCAGAACAGCATTTCCTGCAAGCCATCAAGTTTAACAAGTACCATGTCAACGCGCACTACAACCTCGGGAAACTTTACAAAAAAAGCGGTCGAGCATACCAAGCTACAGTGATGTTTGAGAAGTGTGTATGGCTTCAGCCTCGATTCATTCAAGCTCACATAGAATTGCTGGGCTTGAAGCCGGAGTCGGAGAAGCACAGGATCCTTGCAAGGCTGGTGGAACTCGAACCTAATAACTGGGAACATTTCGTGTTATTCGGCAATTGGTGGAGAAATAACGGATTGGTGGGACCGGCTTCCAAGTTTTATCTGGAGGCGATGAGATTGAGTTTTCGAAGGCGTGACGTCGAGCTGCCAGTCAGGAGCGATCTAATATCGTTCAGATCGACCGCTTTGATGTACAGGTCGTTAGGACAGAAATCGAGAACACTACAGCTTTTGACAAGATGGCATACTTGGCGCCGTGGCTGGCCTAGTGCCGCTGCAGCCCACATGTATCTAAGAGATTGGAGACTCAAAATGGAACTCGAAGGTCGAGTACAAATTTATTCTAAAGCTGTCAATCCTACAAAATCGACAAAGTGTTTCGACCACGCGCAACTGACAGTGGAAACCGCTACCACTTACACTAATAAAGTACCCAAAATAGAAGAAACCGTTAAAATAGACGAAAAAAACAATTACAATAAAGTTGCGAAGAAAGGTGGAGATGTGAATTCGTGCGAGTGTAAAAAATGCGGGACCAAAAAACGCAATATATCTGTGCCGTCGCAAATTAAAACAACACACAACAAATCAGAAACAGGACTGAAAGACAAACAGTGCGTGAGGAAAGACGAGACAGTTAAAAATGACGCCATTCCCACTAATATGATAGCTAACTATTGGAATCAAAGCGATTGTGGAACTCTAGTTAAAGATCTTGCTTAA

Protein

MKFEKKCTGLSVRTIKVVVSLALLVCFRLALLQGTWPSFSPQDNPAAFHPSFFVRLMTFCYLAAFNWWLLLCPWTLSHDWQMGSVPLITSGWDPRNLLTCAAFGALLLLCYRFIADLEVQRHTPAVVGMLLLVIPFVPASNLLVTVGFVIAERVLYIPSVGSVIITAYGVQLIWYSKPGTKAVLVIGLAVLAASGVARTYRRNADWRDRATLLRTDLVTLPQNAKLHYNLGNFLRESEQQESAIKHYKEALRLWPTYASAHNNIGTLVSGLENAEQHFLQAIKFNKYHVNAHYNLGKLYKKSGRAYQATVMFEKCVWLQPRFIQAHIELLGLKPESEKHRILARLVELEPNNWEHFVLFGNWWRNNGLVGPASKFYLEAMRLSFRRRDVELPVRSDLISFRSTALMYRSLGQKSRTLQLLTRWHTWRRGWPSAAAAHMYLRDWRLKMELEGRVQIYSKAVNPTKSTKCFDHAQLTVETATTYTNKVPKIEETVKIDEKNNYNKVAKKGGDVNSCECKKCGTKKRNISVPSQIKTTHNKSETGLKDKQCVRKDETVKNDAIPTNMIANYWNQSDCGTLVKDLA

Uniprot

A0A2H1V1T9   A0A3S2LRN5   A0A194PDJ1   A0A194RHT7   A0A0L7LR60   A0A2H1VQ98   + More
A0A2A4JI66   A0A212EMG9   A0A0N1IEF5   A0A194PIY1   A0A336KPG1   D6WAH1   A0A1Y1K780   A0A087ZQP9   A0A2C9H6G0   A0A1B6IMY3   A0A3L8E3Q0   J9KBD8   A0A2S2NY28   A0A2H8TL04   A0A2S2QZX7   E0VKZ8   A0A195EUV1   L5KK52   A0A1S3H6C7  

Pubmed

26354079    26227816    22118469    18362917    19820115    28004739    + More
30249741    20566863    23258410   

EMBL

ODYU01000286    SOQ34779.1    RSAL01000288    RVE42938.1    KQ459606    KPI91078.1    + More
KQ460205    KPJ17127.1    JTDY01000277    KOB77947.1    ODYU01003801    SOQ43021.1    NWSH01001302    PCG71785.1    AGBW02013845    OWR42669.1    KQ460545    KPJ14077.1    KPI91045.1    UFQS01000686    UFQT01000686    SSX06207.1    SSX26561.1    KQ971312    EEZ97998.1    GEZM01093157    JAV56318.1    GECU01019439    JAS88267.1    QOIP01000001    RLU27370.1    ABLF02040630    ABLF02040638    ABLF02040658    ABLF02040661    GGMR01009500    MBY22119.1    GFXV01002924    MBW14729.1    GGMS01014108    MBY83311.1    DS235255    EEB14054.1    KQ981958    KYN32023.1    KB030666    ELK12024.1   

Proteomes

UP000283053    UP000053268    UP000053240    UP000037510    UP000218220    UP000007151    + More
UP000007266    UP000005203    UP000075920    UP000279307    UP000007819    UP000009046    UP000078541    UP000010552    UP000085678   

Pfam

PF13181   TPR_8        + More
PF08409   DUF1736
PF07719   TPR_2
PF00515   TPR_1

Interpro

IPR019734   TPR_repeat        + More
IPR011990   TPR-like_helical_dom_sf       
IPR013026   TPR-contain_dom       
IPR013618   DUF1736       
IPR013105   TPR_2       
IPR001440   TPR_1       

SUPFAM

SSF48452   SSF48452       

Gene 3D

1.25.40.10    

ProteinModelPortal

A0A2H1V1T9   A0A3S2LRN5   A0A194PDJ1   A0A194RHT7   A0A0L7LR60   A0A2H1VQ98   + More
A0A2A4JI66   A0A212EMG9   A0A0N1IEF5   A0A194PIY1   A0A336KPG1   D6WAH1   A0A1Y1K780   A0A087ZQP9   A0A2C9H6G0   A0A1B6IMY3   A0A3L8E3Q0   J9KBD8   A0A2S2NY28   A0A2H8TL04   A0A2S2QZX7   E0VKZ8   A0A195EUV1   L5KK52   A0A1S3H6C7  

PDB

6MA5     E-value=3.63641e-14,     Score=192

KEGG

101735558    K23424 protein O-mannosyl-transferase [EC:2.4.1.-] | (RefSeq) transmembrane and TPR repeat-containin

GO

GO:0016021   GO:0005515   GO:0006355   GO:0043565   GO:0015031   GO:0015450   GO:0005737   GO:0005488   GO:0022891   GO:0003707   GO:0051537  

Length:

582

Number of predicted TMHs:

5

Exp number of AAs in TMHs:

121.85257

Exp number, first 60 AAs:

30.15589

Total prob of N-in:

0.86237

POSSIBLE N-term signal

sequence

inside

1  -  16

TMhelix

17  -  39

outside

40  -  53

TMhelix

54  -  76

inside

77  -  95

TMhelix

96  -  115

outside

116  -  124

TMhelix

125  -  147

inside

148  -  153

TMhelix

154  -  176

outside

177  -  582

 

 

Pi

294.230689

Theta

175.840278

Tajima's D

1.109423

CLR

0.490673

CSRT

0.686715664216789

Interpretation

Uncertain