Gene

KWMTBOMO07613

Pre Gene Modal

BGIBMGA000838

Annotation

PREDICTED:_fork_head_domain_transcription_factor_slp2_[Bombyx_mori]

Location

Bomo_Chr13(+):1391828-1403414      View in EpiBrowser

Transcription factor

Fork_head

Location in the cell

Cytoplasmic   Reliability : 1.013 Mitochondrial   Reliability : 1.561

CDS

ATGCGGACTCCTTTCACGCGAACGTATCTAGGAGATATCACGGGCTGGCACGCTCCGCTAAGCCCCGTTCCGAATTCGAAAAATGATTCAGTCAACACGAGTCACACGAGCACAGCTGTCAAAGCAAACATGGCCACCAAAACCCCGGAGAGTGAAAAGTGGAGGCGACGCAAATTGTCGAAGAACATCGACAATGACAACGACTGCGCCAGTTTGGCGTGGCTCTTAAACTTCAGGCTGGACGAAGTGGTCAATGTGAGGGTGCCTGATGACGAACCGGTCGTGAAAGAAGCGAAGGTGGATGTGGAATCGCCAGCGGTGAGGAAGCCCCCGTATACTTATCCTGAACTGATTGAACGAGCGCTCCGGGAGAACGGAGAGCTGACTGTATCCGGGATCTATCAGTGGATATCTGATCGTTTCCCGTTCTATAAAGCCAACGACGAACGCTGGAAGAATTCCGTTCGACACAATCTCTCCATAAACCCACATTTTCGTAAAGGAGCCAGAGCACCGCAGGGGGCCGGTCATCTGTGGTCTCTGGCCGCTAACGCCATAGACCTGCTGCCGTTGAGGAATACGCCCATGCCCGAAGAAAAGGCGGCCGAGCCACTTCACACTGCCAAAATAATTGGTTTCCCTAAAGTAATCGTATTGGACGAGGCTGCCATAGCAGCAGCAAGCATTATTCCCGATCAAGATTTGTTCAGTGGAAGCACAATGTTCCTGAATCCAGTCTCCGCAGAGCAAGTGATCAGGGAATGCGGTCTGATCACTGTCGATTGA

Protein

MRTPFTRTYLGDITGWHAPLSPVPNSKNDSVNTSHTSTAVKANMATKTPESEKWRRRKLSKNIDNDNDCASLAWLLNFRLDEVVNVRVPDDEPVVKEAKVDVESPAVRKPPYTYPELIERALRENGELTVSGIYQWISDRFPFYKANDERWKNSVRHNLSINPHFRKGARAPQGAGHLWSLAANAIDLLPLRNTPMPEEKAAEPLHTAKIIGFPKVIVLDEAAIAAASIIPDQDLFSGSTMFLNPVSAEQVIRECGLITVD

Uniprot

H9IUA8   A0A2H1W191   A0A2A4J1F2   A0A212FEL3   A0A3S2NBU7   A0A0N1IN41   + More
A0A194RMB1   A0A336LRA1   N6UQN7   J3JVQ7   U4UBF0   A0A2P8YMA0   A0A0C9Q949   A0A182JLJ9   A0A0P6EQ26   A0A182VJ78   A0A0P6E7Y7   A0A0N8EH45   A0A0P5TPV0   A0A0P5MAD2  

Pubmed

19121390    22118469    26354079    23537049    22516182    29403074    + More

EMBL

BABH01001499    ODYU01005646    SOQ46706.1    NWSH01004287    PCG65270.1    AGBW02008917    + More
OWR52189.1    RSAL01000258    RVE43392.1    KQ459606    KQ458757    KPI91077.1    KPJ05219.1    KQ460205    KPJ17126.1    UFQT01000116    SSX20315.1    APGK01020473    APGK01020474    KB740202    ENN81052.1    BT127325    AEE62287.1    KB632184    ERL89658.1    PYGN01000495    PSN45382.1    GBYB01010843    JAG80610.1    GDIP01017272    GDIQ01060061    LRGB01003146    JAM86443.1    JAN34676.1    KZS04036.1    GDIQ01066606    JAN28131.1    GDIQ01027308    JAN67429.1    GDIP01123330    JAL80384.1    GDIQ01182206    JAK69519.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000283053    UP000053268    UP000053240    + More
UP000019118    UP000030742    UP000245037    UP000075880    UP000076858    UP000075903   

PRIDE

H9IUA8   

Pfam

PF00250   Forkhead

Interpro

IPR036388   WH-like_DNA-bd_sf        + More
IPR036390   WH_DNA-bd_sf       
IPR001766   Fork_head_dom       
IPR030456   TF_fork_head_CS_2       

SUPFAM

SSF46785   SSF46785       

Gene 3D

1.10.10.10    

ProteinModelPortal

H9IUA8   A0A2H1W191   A0A2A4J1F2   A0A212FEL3   A0A3S2NBU7   A0A0N1IN41   + More
A0A194RMB1   A0A336LRA1   N6UQN7   J3JVQ7   U4UBF0   A0A2P8YMA0   A0A0C9Q949   A0A182JLJ9   A0A0P6EQ26   A0A182VJ78   A0A0P6E7Y7   A0A0N8EH45   A0A0P5TPV0   A0A0P5MAD2  

PDB

5X07     E-value=6.87218e-16,     Score=203

KEGG

101735653    no KO assigned | (RefSeq) fork head domain transcription factor slp2

GO

GO:0043565   GO:0005634   GO:0003700   GO:0003677   GO:0006355   GO:0015031   GO:0015450   GO:0005737   GO:0005488   GO:0022891   GO:0003707   GO:0051537  

Subcellular location

Nucleus  

Length:

261

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01992

Exp number, first 60 AAs:

0

Total prob of N-in:

0.07575

outside

1  -  261

 

 

Pi

196.777673

Theta

19.310751

Tajima's D

0.428715

CLR

0.765883

CSRT

0.506424678766062

Interpretation

Uncertain