Silkworm Genome Informatics Database

Gene

KWMTBOMO07606

Pre Gene Modal

BGIBMGA013708

Annotation

PREDICTED:_organic_cation_transporter_protein-like_[Bombyx_mori]

Location

Bomo_Chr13(+):1257472-1276692 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 4.641

CDS

ATGGTTGTGAAAGAAAATATCGATTTAGAACACGTTTTATCGAAATTTAGTTTGAAGAGAATGTTTTACGTGAAGTTTTTGAGTTTGTTGTTATTTTCCGGTGTGACGAATTCATTTTACAATGTCAACTATGTTTTTGCAGCCGCTGATGTTCGTTATAGGTGCAAGTACCCGGAGTGTGATAATAAGAATAGTGAAGTCTTAAATTTTACCTTCGACAATGGAAAATGCACAAAATATGCACTATTAAATAAAGCTGAATACTGTTCAGTAGAAAATATAGATCTTTCTCGAGGGACTAGCTGCAAAGAATGGGTTTACGAGGAAAAAGGCAGTTTTGTTGAAGAGTTAGGAACAGCCTGCGAAGATTGGAAGCGGACTTTGGTTGGAACAGTGCACAGCTTCGGGTATATGATCGGTCTGCTCATCGTGGGGCCATTGGCCGATAAGTTAGGCAGAAAAAAGTTGATAATTTTTTCTGGAATAACCGCTGCGACGATGGGCTTGGGTAGGAGCATCACATCTTCCTACTGGGTGTATGTGGTACTAGAGCTCATAGAAGCATTGTTTGGGGACACTTATTCAGCAACATTTATGCTGGGTGTAGAAATGGTAACAAAAGAGAATAGAGTTATATTTATCACTCTCATGACTGCTAGCACGGCACTAGCCGGTATAGTAATGGCATTAATAGCATGGGCCCTACCTTACTGGCGGCATTTCCTTAGAGCGATATACGGTCCTTCTTTATTCTTTATCATGTACATATTTCTATTAGACGAAAGCGTTAGATGGTTACTAATCAAAGGACAGAAAGAGAAAGGGAAGGAGATTCTAAAAAAGGCTGCCGAAGAAAGCAGGGTTGAGCTGAACGCTGACAATATTAGCATTAAATGTGAGGATGGATCAACTAAAACTGATATGGTGACACTGTTGAAAATTACTTTTCGCTCTAATAAATTGGTGCTAAGATTCCTGGCGTGTGTTTGTATGTGGATAACGGGCATATTCAATAAATACACGTTGTTGATAAATTCAGTTGAATTAGAAGGGAATAAAGACCGGAGACGATTCATGATGACTGGATCACTGTCCATGGAGTCAACTGACTCGCTAGAAGACGCACCTTCCAGTATAAATGCAAGGAGTATGATCGACCTGTCTACTCATACAATGACTAGTCATCAAGAAGTAATAACATCATTGCAACTATCCATTGAGAATCTGAAGAAACAATTACAGACTACTCGTAGTGAAAATACAGTATTGAAACAAAAATTAGATGAACAAATACATATCAATAAGCAACTTAATAAGCAAATAAATGGAACTACGGTATCCAGTTCAAAGAAGAAAAATAATAATAATAAAACAGAAATAAGAGCCATGAAACCAAACATAGAAGCTAGAAAATTAGATCTGGACCTAGAATTTCAAACGCCTAAGTCTTCTCCCCTGGTACCTAAAGATACAAAAGTAAACCTTAGCCTCAGTCAATGTGATGATGAATTATTAGAATCCTCCCACATTGACAGGAACAAACCAACTCTGAAACCAAGTGGTAGTAGGAGATTACTCATATTTGGAACACAACAGTGCGTTGGACTAGCGGCTAAACTACTTAAAACTAGATTATATACGAACTATGAAAAATACCGCATCACGGCTGTGACTAAACCGTTTGCTTCGTCTGAAGAAGTCTTCAAATGTTGTGAAAATTTGAACTTAAATAAGGATGACAAGCTTGTCATTGGTGTTGGAGAGAATGATACAAACCCTTTCAAATTGTTAATAGAGTTATCAGCTACTTTGAAAAGACTCTACGAGAGGAAGATGCCTTTAATATTTTCATTTATTCTGACTGGGATATTTTGTGTTGGACAGTCTTTTGTACCAAAAGGTAACGCCTGGCTTTCATTAGCATTATTTCTGATCGGGAAGTTTATGGCAACGATATCATACGCTACGGTGTATCTTTATACGTCGGAGCTCTTCCCTACGTACACAAGGAACACAATGCACGCATTATGTTCGTCTTTAGGAAGGATAGCATCGATTCTTGCTCCTCAAACGCCTCTATTGATACATCACTGGCCAGGTTTTCCTTCAGTTATCGTTGGTGGGCTGTCTCTAGTGACTGGTACGGTCGTGATCTTTATGCCGGAGACTTCGGAGGATGTTCTACCAGACACCGTCCGTGAAGCCGAAGCAATCGGTACCAAATTTGGCCCGGACACACCGAGCAGCATATGGTCCAATTCGTCCGAGGGTGATTTGTCACTGCCGCCCATGGACATCACCAATGCCAGGGGCACAGCCAAGACGCTGCCTACAGCTAAGTACTCTCCGCAAGCTTTGTTGAAAGAAGAAAGAGCCACTTTGTTCAGCTTATTTGTAAAATCGTGTATGAATGTTCATGCTTTTTATAAAGGTGGTACTGTTAAAGTTATTGTGATGTCTATTAAAAGTAAAGATGTATTGGAAGAACCTAACGATGACGTGGTATTGGAGAAGATCTTATCGAGGTTCAGACCCTTGGGTCCGTATTACAGAAGATTCATGCCGTTTTTGATCATCGCGACCATATCAAATGCGTTTTACTGCATGAACTATGTCTTTGCCGCAGTGTCGGTGGATTATAGGTGCAGGTATGAGTGTGAAAGGAATCATAGCTTAGTGGGCTCAGCACTAAACCTAAGTTTAAAGGCAGGAAAATGCTACAAATATTCACTCATAGACGAGAACGGAGACTGCTCTGTGGATAATTTTAACGTCTCAAATGTTGAAGCCTGCAAGGAATGGGCGTATGATGAACCGGAGAGCTTCGTTGCTGAATTCCAGTTGGGATGTCAAGAGTGGAAGAGGACTTTGGTCGGAACAGTGCACAGTTTCGGCTATATGCTAGGTCTGTTGTTATTGGGACCGATATCTGACAAGGTAGGAAGAAAGAAATTGCTGGTATTCACTGGCATCGTTGGAGGGATTTTGGGCTTTTCAAGAAGCATCATTAGCTACTATTGGGCTTATATCGCTTTAGAATTATTAGAAGCTTTACTCGGAGATTCTTATTCACCAAATTATATGTTAGGTGTGGAGATGGTGGCGAAACAGAATCGAGTATTTTTCGGTCCACTCATGATCGGGAGCATGTCTGTAGCTGGCATATTATTATCTCTAGTCGCTTGGCTTTTACCAAACTGGAGATTGTTTTTGAGAGTTATCTATTCACCTGCCCTTATATTCATACTATACGGATTCTTCTTAGACGAAAGCGTTAGGTGGTTATTAATCAAAGGTAAGAAGGAAGAAGCGAAGAAAATTCTTAGGAAAGCTGCTGAGATCAGTAACCTGTATCTAGATGAAGAGACTCTTGATAGTATCGAAAGCGAAAAGAGCACAGATTGCACCAGTTTCATTAAATTGCTCAAGATGACCATAATGTCTCGGAAGCTGCTCCTTAGGTTCCTGGCGTGTCTCTGTATGTGGATCACATCTACGTTCAACAAATACGCTTTATTGATAAACTCTGTGTCTCTAGAAGGAAATAAATATGTTAATTACGCTCTGATTGCATTCGCCGACCTCCCGGCCAGTATAACGTTAATATTTATTCTCATTAAATTCAAGAGGAAAGGATCGCTTATGTTCTCCTTTTTCCTGACGGGGCTGTTCTGTGTTATTCAATCACTTGTACCAAAAGGTTACTCAACTTTATCCCTATCGCTGTTCTTCATGGGGAAGCTTGCCTCAGCTCAGTCTTACGCTACTGTATACTTGTATACGTCCGAGCTATTCCCTACGTATACTAGGAACACAATGCACGCTGTCTGCTCGTCAGTGGGTAGAATCGGATCGATTCTTGCACCACAAACACCGTTATTGAGGCAGTTTTGGCCGGGTCTACCTTCAGTCATCATAGGTAGTTTGTCAGTGATCACGGGTATGATAGTTATGATGATGCCCGATACTGCTGAGGATGTACTGCCAGATACCATCAAGGAAGCAGAAGCTTTGGGTATGAAGACAGTTAAGGACAAGAAAGCTGTAGTTAAATTGTTGAAATAA

Protein

MVVKENIDLEHVLSKFSLKRMFYVKFLSLLLFSGVTNSFYNVNYVFAAADVRYRCKYPECDNKNSEVLNFTFDNGKCTKYALLNKAEYCSVENIDLSRGTSCKEWVYEEKGSFVEELGTACEDWKRTLVGTVHSFGYMIGLLIVGPLADKLGRKKLIIFSGITAATMGLGRSITSSYWVYVVLELIEALFGDTYSATFMLGVEMVTKENRVIFITLMTASTALAGIVMALIAWALPYWRHFLRAIYGPSLFFIMYIFLLDESVRWLLIKGQKEKGKEILKKAAEESRVELNADNISIKCEDGSTKTDMVTLLKITFRSNKLVLRFLACVCMWITGIFNKYTLLINSVELEGNKDRRRFMMTGSLSMESTDSLEDAPSSINARSMIDLSTHTMTSHQEVITSLQLSIENLKKQLQTTRSENTVLKQKLDEQIHINKQLNKQINGTTVSSSKKKNNNNKTEIRAMKPNIEARKLDLDLEFQTPKSSPLVPKDTKVNLSLSQCDDELLESSHIDRNKPTLKPSGSRRLLIFGTQQCVGLAAKLLKTRLYTNYEKYRITAVTKPFASSEEVFKCCENLNLNKDDKLVIGVGENDTNPFKLLIELSATLKRLYERKMPLIFSFILTGIFCVGQSFVPKGNAWLSLALFLIGKFMATISYATVYLYTSELFPTYTRNTMHALCSSLGRIASILAPQTPLLIHHWPGFPSVIVGGLSLVTGTVVIFMPETSEDVLPDTVREAEAIGTKFGPDTPSSIWSNSSEGDLSLPPMDITNARGTAKTLPTAKYSPQALLKEERATLFSLFVKSCMNVHAFYKGGTVKVIVMSIKSKDVLEEPNDDVVLEKILSRFRPLGPYYRRFMPFLIIATISNAFYCMNYVFAAVSVDYRCRYECERNHSLVGSALNLSLKAGKCYKYSLIDENGDCSVDNFNVSNVEACKEWAYDEPESFVAEFQLGCQEWKRTLVGTVHSFGYMLGLLLLGPISDKVGRKKLLVFTGIVGGILGFSRSIISYYWAYIALELLEALLGDSYSPNYMLGVEMVAKQNRVFFGPLMIGSMSVAGILLSLVAWLLPNWRLFLRVIYSPALIFILYGFFLDESVRWLLIKGKKEEAKKILRKAAEISNLYLDEETLDSIESEKSTDCTSFIKLLKMTIMSRKLLLRFLACLCMWITSTFNKYALLINSVSLEGNKYVNYALIAFADLPASITLIFILIKFKRKGSLMFSFFLTGLFCVIQSLVPKGYSTLSLSLFFMGKLASAQSYATVYLYTSELFPTYTRNTMHAVCSSVGRIGSILAPQTPLLRQFWPGLPSVIIGSLSVITGMIVMMMPDTAEDVLPDTIKEAEALGMKTVKDKKAVVKLLK

Uniprot

NA

ProteinModelPortal

NA

PDB

4YB9 E-value=1.82061e-07, Score=138

KEGG

101740780 no KO assigned | (RefSeq) organic cation transporter protein-like

GO

GO:0005215 GO:0016021 GO:0022857 GO:0015031 GO:0015450 GO:0005737 GO:0005488 GO:0022891 GO:0003707 GO:0051537 GO:0055085

Length:

1354

Number of predicted TMHs:

18

Exp number of AAs in TMHs:

400.84555

Exp number, first 60 AAs:

22.08273

Total prob of N-in:

0.38658

POSSIBLE N-term signal

sequence

outside

1 - 25

TMhelix

26 - 48

inside

49 - 128

TMhelix

129 - 148

outside

149 - 167

TMhelix

168 - 190

inside

191 - 210

TMhelix

211 - 233

outside

234 - 236

TMhelix

237 - 259

inside

260 - 321

TMhelix

322 - 344

outside

345 - 613

TMhelix

614 - 631

inside

632 - 637

TMhelix

638 - 660

outside

661 - 855

TMhelix

856 - 878

inside

879 - 956

TMhelix

957 - 976

outside

977 - 985

TMhelix

986 - 1008

inside

1009 - 1041

TMhelix

1042 - 1064

outside

1065 - 1068

TMhelix

1069 - 1088

inside

1089 - 1151

TMhelix

1152 - 1174

outside

1175 - 1183

TMhelix

1184 - 1206

inside

1207 - 1212

TMhelix

1213 - 1232

outside

1233 - 1241

TMhelix

1242 - 1264

inside

1265 - 1296

TMhelix

1297 - 1319

outside

1320 - 1354

Pi

183.785573

Theta

138.508814

Tajima's D

0.955041

CLR

0.729186

CSRT

0.651967401629919

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics