Gene

KWMTBOMO07600  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA013713

Annotation

transport_protein_Sec61_gamma_subunit_[Bombyx_mori]

Location

Bomo_Chr13(-):1145002-1146511      View in EpiBrowser

Full name

Protein transport protein Sec61 subunit gamma       + More
Protein transport protein Sec61 gamma-1 subunit      
Protein transport protein Sec61 gamma-2 subunit      

Location in the cell

Mitochondrial   Reliability : 1.361 Nuclear   Reliability : 1.121

CDS

ATGGATCAGATCGCAAAATTCGTCGAGCCTGGCAAGCAATTCGCTAAGGACTCCATCAGATTAGTGAGAAGATGCACAAAACCTGATAGGAAAGAATTCCAAAAGATTGCCATTGCAACAGCCATCGGATTTTGCATCATGGGCTTCATTGGATTCTTTGTAAAGCTGATTCATATCCCCATTAATAACATAATTGTCGGCTCATAG

Protein

MDQIAKFVEPGKQFAKDSIRLVRRCTKPDRKEFQKIAIATAIGFCIMGFIGFFVKLIHIPINNIIVGS

Description

Necessary for protein translocation in the endoplasmic reticulum.

Subunit

Heterotrimeric complex composed of SEC61-alpha, SEC61-beta and SEC61-gamma.

Similarity

Belongs to the SecE/SEC61-gamma family.

Keywords

Endoplasmic reticulum   Membrane   Protein transport   Translocation   Transmembrane   Transmembrane helix   Transport   Complete proteome   Reference proteome  

Feature

chain  Protein transport protein Sec61 subunit gamma

Uniprot

A0A2A4J315   A0A194RHS7   A0A2H1X2E8   R4G487   I4DJM6   A0A212F582   + More
Q1HPU6   A0A1W4WL50   R4UJG6   A0A067RFP5   T1J662   Q7Z1B8   D2A0E3   Q8I7D9   A0A2P8Y8N1   A0A194PDI3   E9GJF6   A0A0L8HIG3   A0A1D2MIC7   A0A1B0D9M1   A0A1B0CK58   A0A0P5YLP7   A0A0J7L5E7   A0A158NZX2   A0A084W673   A0A182IRG2   A0A2D0RE16   R4WR59   I3KAR2   N6UM64   A0A1B2AK15   B4P5N1   B4HP58   B3NS71   B4NSF5   Q9V668   A0A1L8DFC0   A0A0U1SCG3   A0A3B4H222   A0A2D0PSA2   A0A3Q4G6I1   A0A3B4CLX1   A0A3P9D525   A0A3Q3CEU5   U5EMU7   A0A210R4Y6   H2YIU5   A0A2A3ES95   V9IJM2   A0A088AP15   A0A182Y225   A0A2Y9D2A6   A0A182QA85   A0A182V3M8   A0A182NP92   A0A182JXZ9   A0A182KVG9   A0A182X451   A0A182RWL4   K7IM47   J9JWT5   A0A182P1T1   B4PZE8   B4I790   X2JCL6   Q9VWE9   A0A182I5M0   A0A1A9YJ89   A0A1A9USW0   A0A1B0BCU3   A0A0L0CNA9   A0A1A9ZQI9   D3TRH3   C3ZGZ4   Q962X7   A0A1W4VW22   B4MAY8   B4HAN7   A0A0M3QZA4   B3MQB7   B4N1U9   B4L5E5   Q29IU5   A0A1L8FWK5   Q66KU2   B3NVR5   T1DJE6   A0A1Q3G3Y2   B0WDD4   Q1HRQ1   A0A023ED20   A0A1I8MFP2   A0A1I8QCW0   A0A1L8EHI5   A9QQA4   T1E8A9   A0A2M3ZL47   A0A2M4A3H7   W5JC46   A0A182FVE1  

Pubmed

26354079    22651552    22118469    19121390    24845553    18362917    + More
19820115    29403074    21292972    27289101    21347285    24438588    23691247    25186727    23537049    17994087    17550304    22936249    10731132    12537572    12537569    28812685    25244985    12364791    20966253    20075255    12537568    12537573    12537574    16110336    17569856    17569867    26109357    26109356    26108605    20353571    18563158    18057021    15632085    23185243    27762356    24330624    17204158    17510324    24945155    25315136    20920257    23761445   

EMBL

NWSH01003834    PCG65783.1    KQ460205    KPJ17117.1    ODYU01012871    SOQ59386.1    + More
GAHY01000986    JAA76524.1    AK401494    BAM18116.1    AGBW02010220    OWR48898.1    BABH01036492    DQ443306    DQ533988    HQ638204    ABF51395.1    ABF85697.1    AEH16567.1    KC632390    AGM32204.1    KK852498    KDR22661.1    JH431872    AF540908    KQ971338    EFA01706.1    AJ297727    PYGN01000803    PSN40621.1    KQ459606    KPI91068.1    GL732547    EFX80449.1    KQ418168    KOF88560.1    LJIJ01001163    ODM92729.1    AJVK01028324    AJWK01015761    GDIP01057427    JAM46288.1    LBMM01000664    KMQ97846.1    ADTU01005083    ATLV01020738    KE525306    KFB45717.1    AXCP01002380    AK417147    BAN20362.1    AERX01010121    APGK01026795    APGK01026796    APGK01026797    KB740642    KB632345    ENN79802.1    ERL93106.1    KX531685    ANY27495.1    CM000158    EDW90828.1    CH480816    EDW47507.1    CH954179    EDV56373.1    CH982208    CM002911    EDX15533.1    KMY93113.1    AE013599    AY118846    GFDF01009050    JAV05034.1    EU252385    ACD11949.1    GANO01000861    JAB59010.1    NEDP02000325    OWF56117.1    KZ288193    PBC33999.1    JR050668    AEY61328.1    AAAB01008823    AXCN02001814    ABLF02035819    CM000162    EDX02104.1    CH480823    EDW56188.1    AE014298    AHN59920.1    AHN59921.1    AY070594    APCN01003462    JXJN01012114    JRES01000256    KNC32904.1    CCAG010004713    EZ424025    ADD20301.1    GG666621    EEN48141.1    AF395915    CH940655    EDW66397.1    CH479242    EDW37648.1    CP012528    ALC49029.1    CH902621    EDV44543.1    CH963925    EDW78338.1    CH933811    EDW06404.1    KRG06901.1    CH379063    EAL32558.1    KRT06119.1    CM004477    CM004476    OCT74274.1    OCT75987.1    BC078558    CH954180    EDV46730.1    GALA01000321    JAA94531.1    GFDL01000541    JAV34504.1    DS231896    EDS44447.1    DQ440043    CH477343    ABF18076.1    EAT43047.1    GAPW01006867    GAPW01006866    GAPW01006865    GAPW01006864    GEHC01001263    JAC06731.1    JAV46382.1    GFDG01000671    JAV18128.1    EU247190    ABX75489.1    GAMD01002337    JAA99253.1    GGFM01008429    MBW29180.1    GGFK01001984    MBW35305.1    ADMH02001629    ETN61701.1   

Proteomes

UP000218220    UP000053240    UP000007151    UP000005204    UP000192223    UP000027135    + More
UP000007266    UP000008144    UP000245037    UP000053268    UP000000305    UP000053454    UP000094527    UP000092462    UP000092461    UP000036403    UP000005205    UP000030765    UP000075880    UP000221080    UP000005207    UP000019118    UP000030742    UP000002282    UP000001292    UP000008711    UP000000304    UP000000803    UP000261460    UP000261580    UP000261440    UP000265160    UP000264840    UP000242188    UP000007875    UP000242457    UP000005203    UP000076408    UP000075886    UP000075903    UP000075884    UP000075881    UP000075882    UP000076407    UP000075900    UP000002358    UP000007819    UP000075885    UP000075840    UP000092443    UP000078200    UP000092460    UP000037069    UP000092445    UP000092444    UP000001554    UP000192221    UP000008792    UP000008744    UP000092553    UP000007801    UP000007798    UP000009192    UP000001819    UP000186698    UP000002320    UP000008820    UP000095301    UP000095300    UP000000673    UP000069272   

PRIDE

Q1HPU6    Q9V668    X2JCL6    Q9VWE9   

Pfam

PF00584   SecE        + More
PF10505   NARG2_C

Interpro

IPR008158   Translocase_Sec61-g        + More
IPR023391   Prot_translocase_SecE_dom_sf       
IPR001901   Translocase_SecE/Sec61-g       
IPR019535   ICE2_C       

SUPFAM

SSF103456   SSF103456       

Gene 3D

1.20.5.820    

ProteinModelPortal

A0A2A4J315   A0A194RHS7   A0A2H1X2E8   R4G487   I4DJM6   A0A212F582   + More
Q1HPU6   A0A1W4WL50   R4UJG6   A0A067RFP5   T1J662   Q7Z1B8   D2A0E3   Q8I7D9   A0A2P8Y8N1   A0A194PDI3   E9GJF6   A0A0L8HIG3   A0A1D2MIC7   A0A1B0D9M1   A0A1B0CK58   A0A0P5YLP7   A0A0J7L5E7   A0A158NZX2   A0A084W673   A0A182IRG2   A0A2D0RE16   R4WR59   I3KAR2   N6UM64   A0A1B2AK15   B4P5N1   B4HP58   B3NS71   B4NSF5   Q9V668   A0A1L8DFC0   A0A0U1SCG3   A0A3B4H222   A0A2D0PSA2   A0A3Q4G6I1   A0A3B4CLX1   A0A3P9D525   A0A3Q3CEU5   U5EMU7   A0A210R4Y6   H2YIU5   A0A2A3ES95   V9IJM2   A0A088AP15   A0A182Y225   A0A2Y9D2A6   A0A182QA85   A0A182V3M8   A0A182NP92   A0A182JXZ9   A0A182KVG9   A0A182X451   A0A182RWL4   K7IM47   J9JWT5   A0A182P1T1   B4PZE8   B4I790   X2JCL6   Q9VWE9   A0A182I5M0   A0A1A9YJ89   A0A1A9USW0   A0A1B0BCU3   A0A0L0CNA9   A0A1A9ZQI9   D3TRH3   C3ZGZ4   Q962X7   A0A1W4VW22   B4MAY8   B4HAN7   A0A0M3QZA4   B3MQB7   B4N1U9   B4L5E5   Q29IU5   A0A1L8FWK5   Q66KU2   B3NVR5   T1DJE6   A0A1Q3G3Y2   B0WDD4   Q1HRQ1   A0A023ED20   A0A1I8MFP2   A0A1I8QCW0   A0A1L8EHI5   A9QQA4   T1E8A9   A0A2M3ZL47   A0A2M4A3H7   W5JC46   A0A182FVE1  

PDB

4CG7     E-value=4.3256e-18,     Score=217

KEGG

733141    K07342 protein transport protein SEC61 subunit gamma and related proteins | (RefSeq) transport prote

PATHWAY

03060    Protein export - Bombyx mori (domestic silkworm)
04141    Protein processing in endoplasmic reticulum - Bombyx mori (domestic silkworm)
04145    Phagosome - Bombyx mori (domestic silkworm)

GO

GO:0005623   GO:0015450   GO:0016021   GO:0006605   GO:0008320   GO:0045047   GO:0005789   GO:0008023   GO:0016020   GO:0010507   GO:0006886   GO:0015031   GO:0005737   GO:0005488   GO:0022891   GO:0003707   GO:0051537  

Subcellular location

Endoplasmic reticulum membrane  

Length:

68

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

22.13974

Exp number, first 60 AAs:

21.8937

Total prob of N-in:

0.51581

POSSIBLE N-term signal

sequence

outside

1  -  35

TMhelix

36  -  58

inside

59  -  68

 

 

Pi

277.064821

Theta

192.925738

Tajima's D

1.045823

CLR

0

CSRT

0.673116344182791

Interpretation

Uncertain