Silkworm Genome Informatics Database

Gene

KWMTBOMO07599 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA013705

Annotation

PREDICTED:_glycine_N-methyltransferase_[Amyelois_transitella]

Location

Bomo_Chr13(+):1119292-1138988 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 2.166

CDS

ATGGCAGCGGACCAGGTATTCCACTCGCGTTCCTTGGGTATTCCCTCCGAGGGTGTAAAAGATCAGTACGCTGACGGCAAAGCGGCAAAAACATGGAACAAGTTCATCGGAGATAGTAATCAAAGAACGCAGAACTACAAAGACTTCTTGATCGGTCTCTTGAAGAACAACGGCTGCAAGACTGTTCTGGACGCCGCTTGTGGTACTGGGATAGACTCCATGATGCTGGTGAATGAAGGGTTTAAAGTGGTGTCGGTTGATGCTTCGGACAAGATGTTGAAGCACGCTCTCAAAGCTCGCTGGGAGAAGAGAAAGAACCCCAAATATGATGATTGGGTAATTGAAGAAGCCAACTGGGAGACACTCCCGCAAGACATCGAGACGTTTCTACCAGATACCCAGTTCGACGCCGTCATATGTCTCGGGAACTCGTTCGCCCATTTGTTGGATGAGTACGGAGACCAAAGGATGCAGAAGCTGTGTCTGAGCAACTTCGCGAAATGCCTGAAGCCAGGCGGCCTCCTGTTTATCGACCACAGGAACTATGATGCGATGATCAACACTGGAGCCACTCCGGGGCATTCAATTTATTATAATTGCAAATACCCGGTTGATATCAAGACCTCGGTTCTGGTCGTACGAGGTAGAGCCGAACTCGTCGCATTAGACTACTGCATAGATACTTCAAACGATGGGAGCAAACAGGAAAAGAGTGAGTTCCGTCTATGCTACTACCCACACAAGCTATCAACATTCACGAGCATGCTGGACGAGGCATTCGACAACCGAGCCCGGCACCACATCTACGGAGACTTCCAGCCGCTGGACAAGGTCCCCGTCCCTGCCTTCTACATACACCCAACAATGCCGACGTACCAAGAACTTCACTCACGTGCCCTCAGCATATCTTCCAAGATCGAGACAATAAAAGACCAGTATGCCGATGGAAAAGCAGCTGGTATTTATAATTTGTTAATCGGAGACAGCAATCAGAGAACAAAGTACTATAAAGACTTTTTGATTGGTATGCTGAAGAAGAATAACTGCAAGAATATTCTCGACGCCGCATGTGGTACTGGAATAGACTCAATAATGTTAATTGATGAAGGATTTAAAGTTGTATCAGTGGACGCTTCTGATAAGATGCTAAAATATGCTCTCAAGGCTCGTTGGGACATGAGACAAAACTCTAAGTATGATCAATGGGTAATTGAAGAAGCCAACTGGGAGACACTCCCGCAAGACATCGAGACGTTTCTACCAGATACCCAGTTCGACGCCGTCATATGTCTCGGGAACTCGTTCGCCCATTTGTTGGATGAGTACGGAGACCAAAGGATGCAGAAGCTGTGTCTGAGCAACTTCGCGAAATGCCTGAAGCCAGGCGGCCTCCTGTTTATTGATCACAGGAACTATGAGGCGATAGTCAACAGTGGAACCACTCCGGGACATACTTTTTATTTTAATGTAAGTAAACAATCAGCTACGGGCTGTGTTGATTTTCAGAGTAAGCACCCAGTAGACATTAATACCTCGGTGCTGGTCGTACGTGGTGAACCTGTACTCGTTATTTTAGATTACTGCGTATATCCTTCCGACGATGGAGAGTTAAAGGAAGCGAGGGAGTTCAGTCTGCGTTACTACCCACATAAGCTATCAACATTCACGAGCATGCTGGACGAGGCATTCGACAACCGAGCCCGGCACCACATCTACGGAGACTTCCAGCCGCTGGACAAGGTCCCCGTCCCTGCCTTCTACATACACGTCATGCAAAAGGCTAAAAATTAA

Protein

MAADQVFHSRSLGIPSEGVKDQYADGKAAKTWNKFIGDSNQRTQNYKDFLIGLLKNNGCKTVLDAACGTGIDSMMLVNEGFKVVSVDASDKMLKHALKARWEKRKNPKYDDWVIEEANWETLPQDIETFLPDTQFDAVICLGNSFAHLLDEYGDQRMQKLCLSNFAKCLKPGGLLFIDHRNYDAMINTGATPGHSIYYNCKYPVDIKTSVLVVRGRAELVALDYCIDTSNDGSKQEKSEFRLCYYPHKLSTFTSMLDEAFDNRARHHIYGDFQPLDKVPVPAFYIHPTMPTYQELHSRALSISSKIETIKDQYADGKAAGIYNLLIGDSNQRTKYYKDFLIGMLKKNNCKNILDAACGTGIDSIMLIDEGFKVVSVDASDKMLKYALKARWDMRQNSKYDQWVIEEANWETLPQDIETFLPDTQFDAVICLGNSFAHLLDEYGDQRMQKLCLSNFAKCLKPGGLLFIDHRNYEAIVNSGTTPGHTFYFNVSKQSATGCVDFQSKHPVDINTSVLVVRGEPVLVILDYCVYPSDDGELKEAREFSLRYYPHKLSTFTSMLDEAFDNRARHHIYGDFQPLDKVPVPAFYIHVMQKAKN

Uniprot

NA

ProteinModelPortal

NA

PDB

3THS E-value=1.34685e-88, Score=834

KEGG

101738705 K00552 glycine N-methyltransferase [EC:2.1.1.20] | (RefSeq) glycine N-methyltransferase-like

PATHWAY

00260 Glycine, serine and threonine metabolism - Bombyx mori (domestic silkworm)
01100 Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0017174 GO:0006508 GO:0008237 GO:0005198 GO:0030126 GO:0005737 GO:0005488 GO:0022891 GO:0003707 GO:0051537

Length:

596

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00668999999999998

Exp number, first 60 AAs:

0.00178

Total prob of N-in:

0.00187

outside

1 - 596

Pi

187.594702

Theta

152.975015

Tajima's D

0.539869

CLR

0.011827

CSRT

0.532823358832058

Interpretation

Uncertain

Source	Sequence	Identity	Evalue
26280517	HGVQEIEIEIQSQISK	96.00	1e-12
26280517	HGVQEIEIEIQSQISK	95.24	7e-10
26280517	NVQEVAQTEDIISK	100.00	6e-09
25044914	NYCHVGR	100.00	6e-09
26280517	VPPPWIIAQQR	100.00	0.002

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics