Silkworm Genome Informatics Database

Gene

KWMTBOMO07581

Pre Gene Modal

BGIBMGA013697

Annotation

PREDICTED:_sodium_channel_protein_Nach-like_[Bombyx_mori]

Location

Bomo_Chr13(+):853549-855039 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 2.049

CDS

ATGGATTTAGCTGGATTACTGAAAGAAGCACAGTTTCACGGCGCTAAAAGGCTTTTTGAGAATAGATTCAGATTACTATGGACAGTAGCATTGGGAGTACTTTTCAGTTGTTCTGTGACAGTAGTTTGGATTACCATAAAGCGTTTCTTGGAGAACCCAACATTCATAGTTCGGATGCAAAGTTCTCAGGATGTGATGCCGTTCCCATCGGTTTGGATTTGTCCCGAAATCAGTTTTCCGGAACATAAAATGGACGATTTCGCTAATAAACTGTAA

Protein

MDLAGLLKEAQFHGAKRLFENRFRLLWTVALGVLFSCSVTVVWITIKRFLENPTFIVRMQSSQDVMPFPSVWICPEISFPEHKMDDFANKL

Similarity

Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.

Uniprot

H9JVY4 A0A2H1WBW5 A0A336M8W7 A0A194PNV6 A0A1D2NJQ7 A0A1I8Q6I9 + More
A0A084VTQ3 A0A0L0C4B3 A0A1B0GH50 Q17FC5 R7T832

Pubmed

19121390 26354079 27289101 24438588 26108605 17510324 + More
23254933

EMBL

BABH01036520 ODYU01007312 SOQ49984.1 UFQT01000258 UFQT01000839 SSX22488.1 + More
SSX27545.1 KQ459599 KPI94429.1 LJIJ01000022 ODN05518.1 ATLV01016448 KE525091 KFB41347.1 JRES01000930 KNC27198.1 AJWK01003969 AJWK01003970 AJWK01003971 AJWK01003972 CH477272 EAT45221.1 AMQN01014776 KB311270 ELT89613.1

Proteomes

UP000005204 UP000053268 UP000094527 UP000095300 UP000030765 UP000037069 + More
UP000092461 UP000008820 UP000014760

PRIDE

H9JVY4

Pfam

PF00858 ASC

Interpro

IPR001873 ENaC + More
IPR020903 ENaC_CS

ProteinModelPortal

H9JVY4 A0A2H1WBW5 A0A336M8W7 A0A194PNV6 A0A1D2NJQ7 A0A1I8Q6I9 + More
A0A084VTQ3 A0A0L0C4B3 A0A1B0GH50 Q17FC5 R7T832

KEGG

105841657 K03440 acid-sensing ion channel, other | (RefSeq) sodium channel protein Nach-like

GO

GO:0016021 GO:0005272 GO:0006814 GO:0016020 GO:0015074 GO:0005215 GO:0008270 GO:0022891 GO:0003707 GO:0051537

PANTHER

PTHR11690

Length:

91

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

22.18493

Exp number, first 60 AAs:

22.17551

Total prob of N-in:

0.61094

POSSIBLE N-term signal

sequence

inside

1 - 22

TMhelix

23 - 45

outside

46 - 91

Pi

137.422852

Theta

124.114334

Tajima's D

-0.331762

CLR

27.955581

CSRT

0.283485825708715

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics