Silkworm Genome Informatics Database

Gene

KWMTBOMO07579

Pre Gene Modal

BGIBMGA001112

Annotation

reverse_transcriptase_[Danaus_plexippus]

Location

Bomo_Chr13(+):683459-689293 View in EpiBrowser

Location in the cell

Nuclear Reliability : 1.452

CDS

ATGATGATGGCCAATTGTGAAAAGTTAGTACCCCAGGAGGGTACCGCCTGCGAGTCGGGCGGAGAATCCCTCCGTGCTTCCACCTCGGTGGAAGCACGCTGCCCCACGTATTCTGGGGGGGGCAACAATTGCCAAGATGAAGGAGGCTGTGCGACGGGCAGCGGAATTCCCGTCGAACAGATGCGCTCCCTGATCGCCGGCTCGATGCGCTCTGCGCTCGCCAGCGAATCGGTTGCGATGAACCCCACCAAACCATCGGCGGGGAAAAAGAGGGGCCGAAGGAAGACCCCCGTAGCAACTTCCGACGACGGCGGTGCGTCATCCTCCAGCACCGAGGTGCCGGAAAAGACCATGGCCGTCGAGGAGGTGGCTCCGGTGATTTCGGGGCCTGCTGCGTCGAAAGACACGATGCCCGCACCCCAGTGGGCACCAGTGAGGAGGAGGGGCGCAGTGTCACCGGCGACGTCGGTGGAGTCGATGTCGACGTCGGCCGCGTCCCTGGCTAGCGGGGACGAGGCATTCCGCGACCTCGACCATGCCCTGGTCAATCTGGCTAAGTTGCTGTCGACCGTGGCTGCCAAGGGCGCCGAGCCAGGCAGCAGCTACCGGAAGAGGCTCCGGGAGGGAGCCGCTATGGTTAGGACGAAGCTGATCCCTACCATGTCCAAACTCGTAGCGCAGCTTGACTCCAGGGAGAGTCGCATCCTGGGGGACTCCCCAGCCTTGCGAGAGGGGACTCCCTTGTCACCGATGCCTGCGCTGGCACGCTCTGAGCCACCCGTGAGGAAGATGGACACCAGCGCGCCTTCGCGGGCTGGGATGAGTGTGGCGGCGCTCATGCCAGCGCCTACTTCTGTGGCCCCTGTTCCGCGCGTGCCTACTCCCGCGCTTCCTCGCCCCCCTCGGAGGGTTGAGTTAAGGCCTGCGCCGCCTTCCCGGATATCGGCCGCCCCTGCATCCATACAGGCAGGAAGGTTAAGGACTGAGGACATCCGTTCGCCACTGGCGAGGATGGTAGACGAGTGGCCGGCGCTGCCACGGCCCAGGTCTTCGGAGCCGCCTCTTTCGCCCCCACGTGCTGCAGGGTCGCAGAGGCCTTATAACAAGGCTACTGAAATGGGGGGTGTGGATCACTCCCTCCCAAGCAGACAGGAAATGATGGCCTGCATCTCGCGGGCGGTGGCGGTTGAGGTCGGCAAACACTTGGCTGGCCTTGAGGAGATGCTCCGCTCCTCGATTGGTTCCAGAGAATGCGTCCCTGTACCAACAGCCGCGACCGCCCCGCGGGACCAGGCCACCCAGCCGACCTCCACTTCTACCCCATCCGCGAGGGTGGCACGACGTGGAAGCCGGAATCAGTATAACAGAGGTGCGGGCGCCCAGAATCCCGCCCCGCGATTCCAACCTCAGCCTCGTGTCCTTCCTCCCCCCCCGTCAAGCATGGACGAGGGCTGGACGGAAGTGGTGAAGCGGGGCACCAAAAGATTGCGACAGACAACAGCTCTGGCAGCTCCCCAAGGGGGTCGAGCGCCGACTGCTGTTACCCGAAACACAGCGCTGGCGGCCGTGGCTGCTCCCCGCGAGGGTCGAGCACCGGCCGCTAGCAAGACCAAAAACAAGAAGAAGCCGCGCGCAGCGGGGTCGGCTGCCGTTGTAGTGACGTTGCTGCCGGCCGCCATCGAAAAGGGCCTCACGTATAATGAGGTTATGGCCCGGGCGCGCGCGGCCGTAAGCTTGGAAGAAATCGGAGCAGAGGAGGGCCTCCGCTTCCGGCACACAGCCAATGGGGCGAAGCTATTGGAGTGTCCCGGTGCCGATAGTTCTGGCATCGCGGACAAACTAGTGGCGACGCTCCGCGTGGCGTTGCCGGAAGAAGAGGTGCGCGTGCACAGGCCGGTGAGGATGGCCGAGATTAGGATCACCGGCCTGGACGACTGCGCCACCAAGGAGGAGGTGGCAGCTGCGATAGCGGCCCAGGGGAGATGTGCCCCAGAGAGCGTGACCGTGGGCGAACTTCGCTCAGGGTACTCCGGGGCCAGGTCAGCGTGGGCGCGCTGCCCTGTGGAGGCGGCCACTTCCTTGGCTACTCCTCCACCGGGAAGATCGACGGGGGATCCAGGGAGACTACGCGTGGGCTGGATAGCGGCCCACGTGCGTCTCCAAGAACCACGTGCCTGGCGATGCCTCCGGTGCTTCAGCACGGGGCACGGACTCGCTAGGTGCACCAGCTCGGTTGACCGCAGCGGTTTGTGTTTCCGCTGCGGCCAGCCGGGCCATAAAGCTGCGTCCTGCACGGCCGCCCTGCATTGCGCTCTGTGCGCTGCAGCCGGACGCAGGGCAAACCACCGGGCGGGAGGCAAGGCGTGTTTCCCGTCCGGTAATAATACCGAACGCAACCGGCGCCGAAAATCGAAGCGCCGGCAAAAGAGAAGGTTGGCCAGAGGAGCACTGGCCAACGCTGTAATCCCCGCTGCGGCGCTGGTGCCGGAGGGCGGGGGCAGCGGAAACCTGAACCACTCCGCCAGAGCTCAGGACATGCTGTCTCAGAGCATGGCGGAGTGGTCCATAGATGTGGCTGTGGTCGCCGAGCCGTACTTCGTTCCCCCAGCAAATGATTGTTGGTTTGGGGACGACGGCGGCCTGGCGGCCATAGTCATACGAAGAGACGCGGCGATCCCCCCCCTGGCGATGGTGACCAGGGGTCAAGGGTTCGTCGCGGTGCAGCTGGAAGGGACCGTCGTGATCGGGGCGTACTTCTCTCCGAACAGGCCTACCGTCGAGTTCGGGCATTTCCTGGGCGAGATCGGGGCGATTGCTCGCCGCCTCGCTCCTCGTCCAGTGATTCTCGCGGGGGACCTCAATGCGAAGTCTATCGCATGGGGCTCCCCCCGCTCGGACGCTCGTGGTAGGCTACTGGAGAGGTGGGCGAACGCGGCCGGCCTCTGTTTGTCGAATAGAGGGTCGGTTGCGACGTGCGTGCGGTGGCAGGGCGAGTCTATTGTGGACGTTACGTTCGCGAGCCCGGCCATCGCGCGCCGTATCCGCGACTGGAGGGTTTTGGAGGGGGCGGAGACGTTGTCAGATCACCGATATATTCGGTTTGATCTCTCCGCCCGCTCCGCAGTCGCGGACGCCCTCGGGGACCACCCCCGTGGTGCGTCCCGGTCATTCCCCAAGTGGGCACTGAAGCGCCTGAATAAGGAGCTCCTGATGGAAGCCTCTACAGTGGCGGCGTGGGCGCCCATGCGTCCACACCCGGTCGAAGTCGAGGGCGAGGCAGGGTGGTTTCGGGACACGATGCGTCGCATCTGTGATGTGTCGATGCCCCGGATCGGCCCTCGACTTCCTAATCGCCAGACGTACTGGTGGTCGCCCGAAATTGCGCAACTCCGCGTGGAGTGCGTTCGGGCGAGGCGCGAGTGCGCCAGGCATCGCCGCCGCCGCCTGCCGCGGCGCAACGATCCAGTTGCGTTCGCAGCGGCAGAAGCCCGGCTGCACGCCGCATTTCGCGTCGCACAGAGGGCACTGCAGCTGGCCATCAGAAGAGCCAAGGATCAACACATGGAGGGTCTCCTGGAGACGCTGGATGAGGATCCGTGGGGGCGGCCCTATCATATGGTGCGCAATAAAATGCGCCCATGGGCCCCCCCGATCACGGAGCGTCTCCAGCCTCAGCAGCTGCGGGACATCGTCTCGGCGCTGTTCCCGCAGGAGCGGGAGGGATTTGTCGCTCCCGCTATGGACTCGCCGCCGGAATACGACGGCGAAGTCCCTGCCGAGGTGCCCCATATAACGGGGGCGGAGCTCCGTGTGGCCGTGCGCAAAATGTGCGCGAAGGACACTGCACCCGGCCCGGACGGCGTCCATGGCCGGGTTTGGGCCTTGGCTCTTGGTGCCCTGGGGGACCGACTCTTGAGGCTTTACAACTCCTGCCTCGAGTCGGGACGGTTTCCTTCATCGTGGAGGACGGGCAGACTCGTGCTGTTGAGAAAGGAGGGGCGCCCGGCGGATACTGCTGCCGGGTACCGTCCCGTCGTGTTGCTGGATGAGGTGGGCAAGCTGCTGGAACGCATTCTGGCAGCCCGCATCATCCAGCATCTGGTCAGGGTGGGACCCGATCTGTCGGCGGAGCAATATGGCTTCCGAGAGGGCCGCTCGACGGTAGACGCGATCTTTCGCGTGCGGGCCCTCTCGGATGAGGCCGTTTCCGGGGGTGGGGTGGCTTTGGCGGTGTCACTCGATATCGCCAATGCGTTCAACACCCTGCCCTGGTCCGTGATAGGGGGGGCGCTGGAACGACACGGAGTGCCCCCCTACCTTCGCCGGCTGGTGGGTTCCTACTTGGAAGACAGATCGGTCACGTGTACCGGACACGGTGGGATCGTGCACCGGTTCCCGGTCGTGCGCGGTGTTCCACAGGGGTCGGTGCTCGGCCCTCTTTTGTGGAATATCGGGTATGACTGGGTGCTGAGGGGTGCCCTCCTCCCGGGCCTGAGCGTAATCTGTTACGCAGACGACACGTTGGTCGTGGCCCGGGGGGGGAGTTTTGCTGAGTCTGCCCGTCTTGCTACGGCTGGGGTGGCGCATGTCGTCGGCAAAATCAGGAGATTGGGCCTCGACGTGGCGCTCAGTAAATCCGAGGCCATGTGGTTCCACAGGCCCCGGAGAGTGCCACCTGTCGATGCCCATATCGTGGTTGGAGGCGTCCGTATCGGGGTTGGGGTGCAGTTGAAGTACCTCGGCCTCATTCTAGACAGTCGTTGGACCTTCCGTGCTCACTTTCAGAATCTGGTCCCTCGTTTGTTGGGGGTGGCCGGCGCGTTAAGCCGGCTCCTTCCCAATGTTGGGGGGCCTGACCAGGTGACGCGCCGTCTCTATACAGGGGTGGTGCGATCAATGGCCCTATACGGGGCGCCCGTGTGGGGCCAGTCCCTGGCCGTGGGGGTAGCGAAGCTGCTGCAACGGCCGCAACGCACCATCGCGGTCAGGGTCATCCGTGGTTATCGCACCATCTCTTTCGAGGCGGCGTGTGTACTGGCTGGGACGCCGCCTTGGGTCCTGGAGGCGGAGGCGCTCGCTGCTGACTATCAGTGGCGGGCTGACCTTCGTGTACGGGGCGTGGCGCGTCCCAGCCCCAGTGTGGTCAGAGCGCGGAGGGCCCAATCTCGGCGGTCCGTACTGGAGTCATGGTCTAGACGGCTGGCCGATCCTTCGGCTGGTCGTAGGACCGTCGAGGCGATTCGCCCGGTTCTTGTGAACTGGGTGAATCGTGACAGAGGACGCCTCACTTTCCGGCTCACGCAGGTGCTCACTGGGCATGGTTGCTTCGGTGAGTTCCTGCACCGGATCGGAGCCGAGCCGACGGCAGAGTGCCACCATTGTGGTTGCGACTTGGACACGGCGGAGCACACGCTCGTCGCCTGCCCCGCATGGGAGGGGTGGCGCCGTGTCCTCGTCGCAAAAATAGGAAACGACTTGTCGTTGCCGAGTGTTGTGGCATCGATGCTCGGTGACGACGAGTCGTGGAAGGCGATGCTCGACTTCTGCGAGTGCACCATCTCGCAGAAGGAGGCGGCGGGGCGCGTGAGAGACGCACAGGCCCGCCGCCGTCGAGCGGGGGCCAGGGAGGCGGATATCGCCCAAGCCCTGGCCCTCTAA

Protein

MMMANCEKLVPQEGTACESGGESLRASTSVEARCPTYSGGGNNCQDEGGCATGSGIPVEQMRSLIAGSMRSALASESVAMNPTKPSAGKKRGRRKTPVATSDDGGASSSSTEVPEKTMAVEEVAPVISGPAASKDTMPAPQWAPVRRRGAVSPATSVESMSTSAASLASGDEAFRDLDHALVNLAKLLSTVAAKGAEPGSSYRKRLREGAAMVRTKLIPTMSKLVAQLDSRESRILGDSPALREGTPLSPMPALARSEPPVRKMDTSAPSRAGMSVAALMPAPTSVAPVPRVPTPALPRPPRRVELRPAPPSRISAAPASIQAGRLRTEDIRSPLARMVDEWPALPRPRSSEPPLSPPRAAGSQRPYNKATEMGGVDHSLPSRQEMMACISRAVAVEVGKHLAGLEEMLRSSIGSRECVPVPTAATAPRDQATQPTSTSTPSARVARRGSRNQYNRGAGAQNPAPRFQPQPRVLPPPPSSMDEGWTEVVKRGTKRLRQTTALAAPQGGRAPTAVTRNTALAAVAAPREGRAPAASKTKNKKKPRAAGSAAVVVTLLPAAIEKGLTYNEVMARARAAVSLEEIGAEEGLRFRHTANGAKLLECPGADSSGIADKLVATLRVALPEEEVRVHRPVRMAEIRITGLDDCATKEEVAAAIAAQGRCAPESVTVGELRSGYSGARSAWARCPVEAATSLATPPPGRSTGDPGRLRVGWIAAHVRLQEPRAWRCLRCFSTGHGLARCTSSVDRSGLCFRCGQPGHKAASCTAALHCALCAAAGRRANHRAGGKACFPSGNNTERNRRRKSKRRQKRRLARGALANAVIPAAALVPEGGGSGNLNHSARAQDMLSQSMAEWSIDVAVVAEPYFVPPANDCWFGDDGGLAAIVIRRDAAIPPLAMVTRGQGFVAVQLEGTVVIGAYFSPNRPTVEFGHFLGEIGAIARRLAPRPVILAGDLNAKSIAWGSPRSDARGRLLERWANAAGLCLSNRGSVATCVRWQGESIVDVTFASPAIARRIRDWRVLEGAETLSDHRYIRFDLSARSAVADALGDHPRGASRSFPKWALKRLNKELLMEASTVAAWAPMRPHPVEVEGEAGWFRDTMRRICDVSMPRIGPRLPNRQTYWWSPEIAQLRVECVRARRECARHRRRRLPRRNDPVAFAAAEARLHAAFRVAQRALQLAIRRAKDQHMEGLLETLDEDPWGRPYHMVRNKMRPWAPPITERLQPQQLRDIVSALFPQEREGFVAPAMDSPPEYDGEVPAEVPHITGAELRVAVRKMCAKDTAPGPDGVHGRVWALALGALGDRLLRLYNSCLESGRFPSSWRTGRLVLLRKEGRPADTAAGYRPVVLLDEVGKLLERILAARIIQHLVRVGPDLSAEQYGFREGRSTVDAIFRVRALSDEAVSGGGVALAVSLDIANAFNTLPWSVIGGALERHGVPPYLRRLVGSYLEDRSVTCTGHGGIVHRFPVVRGVPQGSVLGPLLWNIGYDWVLRGALLPGLSVICYADDTLVVARGGSFAESARLATAGVAHVVGKIRRLGLDVALSKSEAMWFHRPRRVPPVDAHIVVGGVRIGVGVQLKYLGLILDSRWTFRAHFQNLVPRLLGVAGALSRLLPNVGGPDQVTRRLYTGVVRSMALYGAPVWGQSLAVGVAKLLQRPQRTIAVRVIRGYRTISFEAACVLAGTPPWVLEAEALAADYQWRADLRVRGVARPSPSVVRARRAQSRRSVLESWSRRLADPSAGRRTVEAIRPVLVNWVNRDRGRLTFRLTQVLTGHGCFGEFLHRIGAEPTAECHHCGCDLDTAEHTLVACPAWEGWRRVLVAKIGNDLSLPSVVASMLGDDESWKAMLDFCECTISQKEAAGRVRDAQARRRRAGAREADIAQALAL

Uniprot

NA

ProteinModelPortal

NA

PDB

1WDU E-value=1.87946e-10, Score=165

KEGG

105841474 no KO assigned | (RefSeq) uncharacterized LOC105841474

GO

GO:0003676 GO:0008270 GO:0015074 GO:0005215 GO:0016020 GO:0022891 GO:0003707 GO:0051537

Length:

1885

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.17989

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00046

outside

1 - 1885

Pi

124.596769

Theta

112.404896

Tajima's D

1.904705

CLR

0.050746

CSRT

0.865456727163642

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree