SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07576
Pre Gene Modal
BGIBMGA013696
Annotation
PREDICTED:_uncharacterized_protein_LOC106139968_[Amyelois_transitella]
Location in the cell
Mitochondrial   Reliability : 2.969
 

Sequence

CDS
ATGCACGCTCTCCAAATTTTAAGAAGTGGATTACGTTTACCTTTTTTTGTTGATAGATTGAGTATCAGCACCACAGCTAAGAGTTTACGAAAACGATCACCTTGTGACGTCTGCCTTTACCCAACTGACAAGAAACCGTGTTTCGACCTGCGGAATGTATCCATTGAGTTCGGCAACCAATGTCACGCGAAATTAATACGATCGTTCCTCTACACTCATTTCTGGCCTCGGGAGCCCAGTGTCGTTGGTCTGTGGATGTCTTTGGAATGCCCTTACCTTGAAGTTCTGACTGAAAAGTACTCTAATTCAGGAGATCGGTTCTTGGCCTTTGAGCGGATCCAACGGACAGGCGAGCGGAAATTGGCAGGAGTTTGCGTAGCTAATACGGTCAGACCTTGGAAAATCAAGGAATTGGAAGAATGGGCTCACAATACCGACTCAAAACCAGAGAGGCACCGCATGTATTTCTGTGCTCACTGTTTGAAGAGTCCGAACTTATTTGCTAAGTACAACGTTGATTACATCTACGATGTCGAAGTACTGACGACCGCAGCAGAAGTGACAGGTCAGGGACTGGCCACGCTTCTACTTCGCACGGCGCTGGCTCACGCGAATGAGCTGCGTCATCCATTGGTACAAACTGTGGCGGTCAGTCAGTACACATCCAAAATATGCGAAAGAGTCGGTATGCGACGGGAATGGTCTATGAATTATGCCGACTACGTGAACGACGCAGGTCAGCGCGTGTTCTTCCCCCGAAGACCGCACCACACGGTCGCTATTTATGTGAAACATTTTGATCCTAAAAAGGGTGGTGAGGTTCCGTGCAAGCCTCCATATTAA
Protein
MHALQILRSGLRLPFFVDRLSISTTAKSLRKRSPCDVCLYPTDKKPCFDLRNVSIEFGNQCHAKLIRSFLYTHFWPREPSVVGLWMSLECPYLEVLTEKYSNSGDRFLAFERIQRTGERKLAGVCVANTVRPWKIKELEEWAHNTDSKPERHRMYFCAHCLKSPNLFAKYNVDYIYDVEVLTTAAEVTGQGLATLLLRTALAHANELRHPLVQTVAVSQYTSKICERVGMRREWSMNYADYVNDAGQRVFFPRRPHHTVAIYVKHFDPKKGGEVPCKPPY

Summary

EMBL
BABH01036548    AGBW02013845    OWR42667.1    NWSH01001302    PCG71787.1    ODYU01003801    + More
SOQ43019.1    RSAL01000203    RVE44392.1    KQ460545    KPJ14079.1    KQ459606    KPI91043.1    JTDY01002058    KOB72216.1    DS232242    EDS38287.1    GAMC01000785    JAC05771.1    GFDL01000047    JAV34998.1    CVRI01000067    CRL06473.1    GDHF01020146    GDHF01004355    GDHF01000639    JAI32168.1    JAI47959.1    JAI51675.1    GEZM01086746    JAV58998.1    KQ971338    EFA02243.1    KQ971312    EEZ98630.1    GBXI01002349    JAD11943.1    GGMR01000026    MBY12645.1    JXUM01242248    KQ635428    KXJ62473.1    GAKP01001276    JAC57676.1    CH477311    EAT43933.1    GEZM01019867    JAV89549.1    EFA02503.2    KX812753    APB53910.1    APGK01042001    KB741000    ENN75799.1    KYB28020.1    CH933807    EDW12125.2    GAKP01008780    JAC50172.1    GAKP01008781    JAC50171.1    KC626038    AGM38201.1    GDHF01019904    JAI32410.1    GAPW01003545    JAC10053.1    GGMR01012976    MBY25595.1    GEZM01033272    JAV84297.1    AK341445    BAH71837.1    GAKP01008778    JAC50174.1    NEVH01011192    PNF32023.1    KC626037    AGM38200.1    CVRI01000038    CRK93822.1    GBXI01004322    JAD09970.1    GAKP01008783    JAC50169.1    PYGN01000143    PSN52966.1    GDHF01005312    JAI47002.1    GBXI01016156    JAC98135.1    GAKP01008782    JAC50170.1    GBXI01000139    JAD14153.1    GDHF01007871    JAI44443.1    GAKP01008779    JAC50173.1    GGMS01005626    MBY74829.1    KQ981567    KYN39822.1    KC626025    KC626027    KC626028    AGM38188.1    AGM38190.1    AGM38191.1    GAMC01013784    JAB92771.1    GFDL01006904    JAV28141.1    ABLF02035746    AK340292    BAH70924.1    JRES01000032    KNC34753.1    CH916370    EDW00276.1    CH933808    EDW09000.2    CH379065    KRT07288.1    CH479190    EDW26011.1    EAL31520.2    KQ977622    KYN01362.1    GECZ01020172    JAS49597.1    NEVH01020940    PNF20477.1    GFDF01005963    JAV08121.1    KRG04412.1    GFDF01010294    JAV03790.1    NEVH01006586    PNF37492.1    KC626026    AGM38189.1    GFDF01009863    JAV04221.1    GECZ01011536    JAS58233.1    CH940653    EDW62403.1    KC626033    KC626034    AGM38196.1    AGM38197.1   
Pfam
PF00583   Acetyltransf_1        + More
PF13673   Acetyltransf_10
PF16009   DUF4779
Interpro
IPR016181   Acyl_CoA_acyltransferase        + More
IPR006591   RNAP_P/RPABC4       
IPR000182   GNAT_dom       
IPR031959   DUF4779       
SUPFAM
SSF55729   SSF55729       
PDB
4FD6     E-value=3.51615e-06,     Score=119

Ontologies

Topology

Length:
280
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00502
Exp number, first 60 AAs:
0.00038
Total prob of N-in:
0.01741
outside
1  -  280
 
 

Population Genetic Test Statistics

Pi
172.76708
Theta
146.011586
Tajima's D
0.572698
CLR
0
CSRT
0.539623018849058
Interpretation
Uncertain
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