Silkworm Genome Informatics Database

Gene

KWMTBOMO07572

Pre Gene Modal

BGIBMGA013729

Annotation

PREDICTED:_facilitated_trehalose_transporter_Tret1-like_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr13(-):474088-482118 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 4.366

CDS

ATGGGATCTCAAAATTGGGACACATACATTCGTCGTGTAAAACAATTCATGGAACTCAACGACATTGAACAGAGACTTCACGTTGCAACGCTCGTGACCTTAGTTGGGTCTGAGTGCTATGACTTAATGTGTGACTTGTGTGCTCCGGACTTACCAGAAGAAAAGGATTTCGACATACTCGTAAAGTTAGTCAAAGATCATCTAGAACCTGAAAGATCGGAAATAGCAGAACGTCATATCTTCAGGCAAAGAAAGCAGCAAAATAACGAAAGCATTCGTTCCTACCTACAAAGTTTGAAACATTTGGCTAAAACTTGCAATTTCGGCATCACATTAGAAATTAATCTACGCGATCAATTCGTATCAGGATTATATAGTGAGGAGATGCGATCAAGGCTGTTTGCTGAAAAAGATATAGATTACAAGCGCGCTGTTGAGTTGGCATCAGCACTGGAAGCAGCGGATCGACATGCGATGGCGGCTGGGGGCACTGGGGGCAGCTCACAGGCTGCGTCCGAGAGCGATGGCATGCATCGGGTCGGCGGAGCGCGCGCGGAGGCTCGGTGCGCCTGCAGACGCTGCGGCAAGCTGGGCCATGCGGAGGGTCGGTGTCGGTACAAGCACTACACCTGTGACTCATGTGGCGAGAAGGGACACCTAAAATCAATGTGTCGGAACCGTAAAGGTAACCAAAAGATTGAAAAAACCCGAGAAAGCTTTCCACTCAGTTTTAAAGAAATTAAAAAGGAAGTTACGAAGGATCCTTTACTAAATAAAATTTACGGTTACGTCATGTTTGGCTGGCCCTCTGTCAGTAAAGAACAAGCAGAAAAACCCTATTTTAACAGAAGAGAATCCATACATATTGATCACGGTTGTCTTGTATGGGGTTACAGAATAATAATTCCAACTTCATTGCGAGAGACTGTGTTACAGGAGTTACATGAGGGACATCCGGGTATTGTTAAGATGAAACAATTAAGTCGGAACTATGTATGGTGGGAGACAGTCGATGCGGACATTGAACGTGTATGTGCTCAGTGCCAGGCCTGTCGGTCTCAGCGCGCTGCACCACCATCGGTGCCGCTGCACTCATGGCCATGGCCGGAAGAGCCGTGGGCGCGCCTTAATCTTGATTTCTTGGGACCGTTTAATAACAAATATTACTTAATTATAGTTGACGCTCATTCAAAATGGATTGAGGTGGAAAAATTGAGCGGTACATCAGCCACGGCAGTAATCGCTTGTCTCAGACGATTGTTTGCTCGATTTGGCTTAGCAAAAAGGGTAGTAACTGATAACGGACCACCTTTCTCGTCGGTCGAATTTAGATCATATTTAAGTAAAAACGGAATAAAACATTTACCGGTGGCTCCGTATCATCCATCTAGCAATGGTGCAGCGGAAAACGCCGTAAAAACCATAAAAAGGGTGTTGAAAAAGGCTCTAATTGAAAAGGAAGACGACAATACCGCCTTGACAAAATTTCTCTTTATGTACAGAAATTCTGAGCATAGCACTACAGGGCGCGAACCAGCAGTTGCTTTGTTCGGACGTCGCCTGCGTGGAAGACTGGATCTGTTGCGTCCCAATACCAGCTCCATAGTACGAGAAGCACAGCTGGCAAGCGAAAGCTATAATGCAGGCACAGCCGGATATAGGGAGGCTGCAGAAGGAGACTCGGTCCTATTGCAAGATTTCACACAGGGAAAAAAGAAATGGACCACAGGAACAATAAAAAATCGCTCAGAGGACATGTCACAAACAAGTGAAGAATCTACGAAAAAAGGACACACGTACCTGCAGTGGACTTTCTCTATAATATCAAACATAGCCTACTTGAATTACGGGTTGCAAAATGGTTGGATTTCACCGTTCGCAAAAAAACTACAGTCAGAAGACTCACCGACCGGGCGACCGTTGACCAGCACTGAGTTTTATTGGGTAGCTAGTGTATCATCACTGGCTGCAATGTTTGGTGTGTCAGCATTCGCGGCCTTAGCTGATGGACTAGGCAGAAAAATCGGGGTCGTCGCCGTGGCTGCGGTGCAGGCTCTCTGCTGGATCATAAAACTGTGTCCTTCAACAACAGTAACTCTGATAATTGCGAGAATCTGTAGCGGCCTGGGAGCTGGTGGAGCTTTCGCGATAGTCCCAATGTATATAAAAGAAATTAGCCAGAACAATATTAGAGGAACCCTCGGAGTCATCATGACAATGTCTCAGAATTCTGGATATTTGATAATGTATTCGATGGGAGCATATATGGAGTATTATACGGTACTATGGATAGCGGCTGTTCCGCCGATACTGAATCTGTTGCTGATGCTATTCGCGCCAGAATCTCCTGCGTTCCTATTGAAAAAAGGAAAAGTCAGTGAAGCTACTGAAGTGATAGCAGGCTTAAGAGGCTTAAATATTGATGACAATGTAGTTTTAAATGAGATTAATGAAATAAGAAATGAAGACGATTTTTACAAGTCTATACCCAATATTTCGTTTTTTGGAATCTTTAAACAGCCAGTATGGCGTCGTGGATTTTTAATAATGTTCGTAATAATTACCACCCATGGTCTAAACGGCGTATTTACTATAGTAACATATGCTTCAACGATCCTGCGAGCCTCTGGAATAACATTAAATCCTGAACTGCAGTTATTAAGTATACCAGCCTTTATGATAATATCTTCAGCTCTGTCCATAATGCTTGTGGAAAGAATGGGAAGAAAGTTCCTTCTAGCAGGTACATATATAGTATCAGCATTCTCATGTGGAACATTAGCTACGACGTTACTAATGCAGGAAAATGGATTCGCTACACCAGGCTGGTTGCCAATTGTAGCTATTGTAGCTACGGTAAGCTGCTATGCGGCTGGAATTTTGCCTCTTCCTTTCGTTATTATGTCTGAGATGTTTAACTTCCAGATCAGAGCAAAAGTGATGAGTTGCATAATAACCACAGGCTGGTTAATGTCATTCGTCCAAGCAGCATCTTATGGACCAATCACAGAAATTTTAGGCTCCTCCGCAGCCTTTTACTTTTTCGCTTTCGTTAATTTTTATGGTGCAGTCACTGCTCTGTTCTTTTTACCCGAAACAAAAGGTAAAAGTGTGGAAGAAATTGAATTTGAATTAAAAGCAAAGTAG

Protein

MGSQNWDTYIRRVKQFMELNDIEQRLHVATLVTLVGSECYDLMCDLCAPDLPEEKDFDILVKLVKDHLEPERSEIAERHIFRQRKQQNNESIRSYLQSLKHLAKTCNFGITLEINLRDQFVSGLYSEEMRSRLFAEKDIDYKRAVELASALEAADRHAMAAGGTGGSSQAASESDGMHRVGGARAEARCACRRCGKLGHAEGRCRYKHYTCDSCGEKGHLKSMCRNRKGNQKIEKTRESFPLSFKEIKKEVTKDPLLNKIYGYVMFGWPSVSKEQAEKPYFNRRESIHIDHGCLVWGYRIIIPTSLRETVLQELHEGHPGIVKMKQLSRNYVWWETVDADIERVCAQCQACRSQRAAPPSVPLHSWPWPEEPWARLNLDFLGPFNNKYYLIIVDAHSKWIEVEKLSGTSATAVIACLRRLFARFGLAKRVVTDNGPPFSSVEFRSYLSKNGIKHLPVAPYHPSSNGAAENAVKTIKRVLKKALIEKEDDNTALTKFLFMYRNSEHSTTGREPAVALFGRRLRGRLDLLRPNTSSIVREAQLASESYNAGTAGYREAAEGDSVLLQDFTQGKKKWTTGTIKNRSEDMSQTSEESTKKGHTYLQWTFSIISNIAYLNYGLQNGWISPFAKKLQSEDSPTGRPLTSTEFYWVASVSSLAAMFGVSAFAALADGLGRKIGVVAVAAVQALCWIIKLCPSTTVTLIIARICSGLGAGGAFAIVPMYIKEISQNNIRGTLGVIMTMSQNSGYLIMYSMGAYMEYYTVLWIAAVPPILNLLLMLFAPESPAFLLKKGKVSEATEVIAGLRGLNIDDNVVLNEINEIRNEDDFYKSIPNISFFGIFKQPVWRRGFLIMFVIITTHGLNGVFTIVTYASTILRASGITLNPELQLLSIPAFMIISSALSIMLVERMGRKFLLAGTYIVSAFSCGTLATTLLMQENGFATPGWLPIVAIVATVSCYAAGILPLPFVIMSEMFNFQIRAKVMSCIITTGWLMSFVQAASYGPITEILGSSAAFYFFAFVNFYGAVTALFFLPETKGKSVEEIEFELKAK

Uniprot

NA

ProteinModelPortal

NA

PDB

4LDS E-value=4.06102e-29, Score=323

KEGG

101740365 K08145 MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member

GO

GO:0016021 GO:0022857 GO:0003676 GO:0015074 GO:0005215 GO:0008270 GO:0016020 GO:0022891 GO:0003707 GO:0051537 GO:0055085

Length:

1048

Number of predicted TMHs:

11

Exp number of AAs in TMHs:

235.19904

Exp number, first 60 AAs:

0.00127

Total prob of N-in:

0.01600

outside

1 - 645

TMhelix

646 - 668

inside

669 - 674

TMhelix

675 - 690

outside

691 - 699

TMhelix

700 - 722

inside

723 - 733

TMhelix

734 - 756

outside

757 - 759

TMhelix

760 - 779

inside

780 - 846

TMhelix

847 - 869

outside

870 - 883

TMhelix

884 - 904

inside

905 - 910

TMhelix

911 - 933

outside

934 - 945

TMhelix

946 - 968

inside

969 - 979

TMhelix

980 - 999

outside

1000 - 1008

TMhelix

1009 - 1031

inside

1032 - 1048

Pi

230.631401

Theta

191.577113

Tajima's D

0.455796

CLR

0

CSRT

0.500074996250187

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics