SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07567
Annotation
PREDICTED:_uncharacterized_protein_LOC106716864_[Papilio_machaon]
Location in the cell
Nuclear   Reliability : 2.761
 

Sequence

CDS
ATGGAGGCAATTTCTCGGCGCCTCCCTGCGGAAATCCTCCGTCCGCCACTAGCGGCCGATACACGGCGGAGGGCTGAGGAGCCGCCGAGACCTAAGCCTAGGGAGGGGAAGCCCGCGGAGGGTGTTAAAAAGCCCGTCGAGGGAGCCCCATCGAGCGATCAGCCCACGACTGCTGGGTCTAAGGGTGAGACCTGGGTTACAGTCGTGGGCCGCAAGAAGGCACGCAGGGTCGCCAAGGCGGCCTCAGCAGCAACGCATGCCCCCGGCCAAACCGCAAAGGCGGTTGCGCAGCCTGCGCGGCGGGCTGCCAAAGGCGGTCGCAAAGGACCGGCGATACGTGCTCCGCGTTCCGAAGCTGTGACGCTCACGCTACAGCCTGGAGCTGCGGAGCGCGGCGTAACGTACCAGTCGGTCATCGCCGAAGCAAAGGCCAAGATCAAATTATCAGATCTTGGTCTTCAGGCCGTCACCCACAGGCAGGCTGCCACGGGTGCACGGTTGTTCGAGGTGGCTGGTACTACGAGTGGCAGTGCCGAAAAGGCGGACGCTCTGGCCGCCAAGATGAGGGAGGTCCTCAGCCCCGAGGACGTCCGGGTCTCCAGGCCAATGAAAACCGCAGAGGTGCGGATTACTGGCCTGGATGACTCCGTGACCTCTGAGGAGGTGGTAGCGGCCGTTGCCCGAAGTGGAGAGTGTCCATTGGACAAGGTGCGGGCCGGCGATATACGCACCGACGCCACCGGACTCGGCGTGGCCTGGGTTCGGTGCCCTGTAGCGTCGGCGAAAAAGATCGCCTTAAGCGGCAGATTGCTGGTTGGCTGGGTTGCAGCGAGGGTGAAACTTCTGCAGCCCCGGGCTCTGCGGTGTTTCCGGTGCCTGGATAAGGGGCACGTCCGGGCAAAGTGCACCGCTGAAGTTGACCGCAGTGACCTTTGTTATCGCTGCGGTCAGCCCGGCCACAAGGCGGCTCAGTGTTCCGCGGCGCTCAACTGCAGCTTGTGTTCAGCTGCAGGGAAGCCAGCGGGACACAGGCTGGGTGGAGGAGCCTGTGGCGCACCAGCCAGCAAGGCCAAGAAGAAGAAGAGGAACTCAAAACCTGCCGGGGAAACCTCGCCACCCCCGCAGGCTAGTAGCTCCGTAGCCGACTCCCGGCCCAGGACCGTTGCCGAGGGAATGGAATGTCAGTAA
Protein
MEAISRRLPAEILRPPLAADTRRRAEEPPRPKPREGKPAEGVKKPVEGAPSSDQPTTAGSKGETWVTVVGRKKARRVAKAASAATHAPGQTAKAVAQPARRAAKGGRKGPAIRAPRSEAVTLTLQPGAAERGVTYQSVIAEAKAKIKLSDLGLQAVTHRQAATGARLFEVAGTTSGSAEKADALAAKMREVLSPEDVRVSRPMKTAEVRITGLDDSVTSEEVVAAVARSGECPLDKVRAGDIRTDATGLGVAWVRCPVASAKKIALSGRLLVGWVAARVKLLQPRALRCFRCLDKGHVRAKCTAEVDRSDLCYRCGQPGHKAAQCSAALNCSLCSAAGKPAGHRLGGGACGAPASKAKKKKRNSKPAGETSPPPQASSSVADSRPRTVAEGMECQ

Summary

Pfam
PF00098   zf-CCHC
Interpro
IPR036875   Znf_CCHC_sf        + More
IPR001878   Znf_CCHC       
SUPFAM
SSF57756   SSF57756       
ProteinModelPortal

Ontologies

Topology

Length:
395
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00654
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00748
outside
1  -  395
 
 

Population Genetic Test Statistics

Pi
0
Theta
0
Tajima's D
0
CLR
36.103482
CSRT
0
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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