SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07563
Pre Gene Modal
BGIBMGA005855
Annotation
PREDICTED:_serine/threonine-protein_kinase_grp_isoform_X1_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.23 Mitochondrial   Reliability : 1.6
 

Sequence

CDS
ATGACCGAGTTCGTCGAAGGCTGGGTTGTCGCGCAGGTGCTTGGTGAAGGCGCCTATGGAGAGGTTCGGCTGCTGGTGCACGGCGCGTCGGGCGCGGCGGTGGCGGTGAAGGCGGCCCAGGGCTCGGGCGGCGCGCGGGAGGCAGCCCTGCAGCGCGCGCTGCGGCACCCCCACGTGCTGCGCTGCTTGGGCGAGCGCACGCATCTGCAACATCACTACGTGTTCCTAGAGTACGCGCAGGGCGGCGAGCTCTTCGACAGAATCGAGCCCGACGTGGGCATGGACAGCGACACTGCCCGGCGCTACTGGCGCGAGACGCTGAGCGGCCTGGAGTACCTGCACGCGCGCGGCGTGGCGCACCGCGACATCAAGCCCGAGAACCTGCTGCTCGACCACCACGACCGCGTCAAGATCTCCGACTTTGGCCTGGCCACCGTGTTCCGCCACGGCGGCCGCGAGCGCATGCTGTCCCGCGTGTGCGGCACCCCGCCCTACGCCGCGCCCGAGGTGCTGTCGGCCGCCCAGCGCCCCTACCGCGCCGCGCCCGCCGACCTGTGGTCCGCCGCCGTCGTGCTCGTCGCCATGCTCGCCGGCGAATTGCCGTGGGAGCGTGCGTCGCATTCGGACGCGCGGTACGCGGCGTGGGTGGGGGGCGCGGCGGACGGGGCGGACTCGGCGAGAGCGGGCGCGGCGGACTCTGCGAAGGCGGGCGCGCCGTGGCACAAGCTGCCGCTGCGGTGCGCGTCGCTACTGCGTGCGGCACTGCACCCCGACCCCGCGCGGCGCCCCGCTCTGGCCGACGTGCTCGCGCACCCCTGGACCAGGGACCGCACCTCAGGACCTTTGAGGGACGAACCTCGCGCGTGGTGCTCGCAGCCGTCCTGCGGCCCGGGGCCCGCCTCGCCCAACGAGCTGTCGCAGGACGACATGGAGGCGCTGCTGTGGCACTCGCAGCCCGCGCACGCCGACGAGCTCGTGGTGGAGGCGGCCGTGTCGCAGCGGCTGGTGCGGCGCCGGACGCGCGTGTGGCTGCGCTGCGGCGCGCGCGAGGCGCTGGCGGCGCTGGAGGAGGCGGCGCGGGCGGCGGGGCTGGCGGTGCGGGCGCTGCACGTGCGCGTGCGCGTGCTGGCGGCCGCGGAGCTGCGCGTGCGCGCGTGGGCCGCGCCGCTGCCGCCGGGCCACGAGGCGCGCGCCGTGCTGGAGTTCCGCCGCTCGCGAGGATGCGGGCTGCAGTTCAAGCGCTGCTTCCTGCGGCTCCGCGCGGCGCTGCAGCCGCTGGCCGCGCCCGCGCCCGCGCTGGGGCCCGCGCTGCCGCTCGCCGAGCCCATGCTGCAGGACGCGGCCCCGGGGCCCGCAGATTGA
Protein
MTEFVEGWVVAQVLGEGAYGEVRLLVHGASGAAVAVKAAQGSGGAREAALQRALRHPHVLRCLGERTHLQHHYVFLEYAQGGELFDRIEPDVGMDSDTARRYWRETLSGLEYLHARGVAHRDIKPENLLLDHHDRVKISDFGLATVFRHGGRERMLSRVCGTPPYAAPEVLSAAQRPYRAAPADLWSAAVVLVAMLAGELPWERASHSDARYAAWVGGAADGADSARAGAADSAKAGAPWHKLPLRCASLLRAALHPDPARRPALADVLAHPWTRDRTSGPLRDEPRAWCSQPSCGPGPASPNELSQDDMEALLWHSQPAHADELVVEAAVSQRLVRRRTRVWLRCGAREALAALEEAARAAGLAVRALHVRVRVLAAAELRVRAWAAPLPPGHEARAVLEFRRSRGCGLQFKRCFLRLRAALQPLAAPAPALGPALPLAEPMLQDAAPGPAD

Summary

Similarity
Belongs to the protein kinase superfamily.
Pfam
PF00069   Pkinase
Interpro
IPR011009   Kinase-like_dom_sf        + More
IPR008271   Ser/Thr_kinase_AS       
IPR000719   Prot_kinase_dom       
IPR017441   Protein_kinase_ATP_BS       
IPR034670   Chk1_catalytic_dom       
SUPFAM
SSF56112   SSF56112       
PDB
3JVS     E-value=1.45681e-55,     Score=548

Ontologies

Topology

Length:
453
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.06522
Exp number, first 60 AAs:
0.01171
Total prob of N-in:
0.00359
outside
1  -  453
 
 

Population Genetic Test Statistics

Pi
6.906417
Theta
7.115158
Tajima's D
0.157242
CLR
0.664063
CSRT
0.432878356082196
Interpretation
Uncertain
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