SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07560
Pre Gene Modal
BGIBMGA005851
Annotation
PREDICTED:_LOW_QUALITY_PROTEIN:_blastoderm-specific_protein_25D-like?_partial_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.674 Nuclear   Reliability : 1.594
 

Sequence

CDS
ATGGAAGAATCTACGATGAACCATTACGAGAAACAGCTGTACACGGTGTTCAAAACATTCGACGTAGATAATAAGGAAGCTCTTGACAAAAATTCCGTTCACGCCCTCTGTGACTCCTTACAGCTCGATGGTCGTGGCGTTCAACTCGTCGAGACGCTCTTCGGTCGGCCCTCCGACAGAGTCACCTTCACGCAGTTCCGTAACGGGCTCCTTTCCGTACTCGACACCGACAGATCTGATCCTTCGGTTGAGCCATCAACTTCAGACGACGCCGACTTAGAACTGGCTCCAAGGTACGTTTTCGGTTCCAAAAAATATGGTCGCCGTTCTCGTCCACCTCGTCCTCTTGAGACTACCTCGACCCCTCGGGCGTCCTCTGCTTCCCGTCTTGATAGCGACCACCGTCGTGCCCGCCATCGTCCTGTATGTAGGCGTAGCTCTTCGGCTATGGAATCACGGGACTTTGAGTCTGATGATGACTACAAACCTTCAGCAGAACTTGATCCTGGTCGTCAGATCGATCGCTCCGAAGCTTTAGCACTGTGTCAAGGTTTGAATATGGAAGGAGTTGACCGTCTCATTGAACACATTTTTACTCAAAGTACTGGTACTGAAATGACTGTCGCAGAATTTTTTAGAAGACTGGATTCAGAACTTGCCACAACAATTCGAGAAGTACGAGAACGTAGTAATACCAATCCCAGAACTGGATCCTCTGAAAGCATTGAGGAGACTAGACTATCAGCTGACAATATTATTGAGGCGTGGGAGAATGCAGGGGTGCCGCGTCCACGAGCCCTGCTTGCTGAGTTAGGATTTAAGGAAAATGCAGTGAACTCAGTTGGCTTGGAAAACATTCTTGATGAAGAACTGCGCACACTGAGCAGTCCTGTTGATGAAAGATCACTACTACTCAATGCAGCTCTTGCAATCGCACGACTACAGGCTAAACTATTACGTGAGCGTGCCGACGCAACTGCTGCTGAACGTGACAAACTACGAGCAGATGTGGCTGATGCTAATGCGAGAGCTCGCCTTCTTGCTCAAGAAATTGATGAAAACCATGCTCGACTTGAAGCTGAATTAAAGTCTAATTTAAAACGGGCAGAAGCACGTCATGCTGAAGCAGTGCGTGGAGCGTCAGCCGAAGCTGCTGCAGAGAGAGAGCGCACTGCTGTCTTATCATCGCGATTGCAAGAAGAGATTAAGCGACGCATCGAAGCTGAAACACGATTAAAAGTAGAATCAGAAGAATTGAAATCGCGGCTTGAGGACACAGAAGTGCGACTTCATAGATCTGAAGAACGTGTTGCGGAAGTCGAGCGCGAGAGAACTCGTCTCGAAGCTGAGGTACTCGTAGCAGATAGGGCAAGTGCAGGGCGAAGCCCTCTGTCCGCAGAGCAGGGATCAGCTGGCGAAATCGAGACGCACATAGAACGACTACAGCTCGAGAACCTACGGTTGCGCGACCGCATCGACGAACTGTGTGCAGCATTGGAGGTACAGGGTCGCGAGACAGTATCCACTGTCGTCACGGGGGTCGATGATCTCTCTGCTGAGCTGGGTTCACTGTTATATCCGAATCGTGCTGAGGAATGTGATTCTTCACCAACAAGCTTGGATCAAAAAGTGCTCAGTCATGTCGAAGCAGTTGTTAAATTACGTGATCTGCTGGATAGCTTGCGAAAGTTGTCGGCGAGCCAGAGCACTTGTGAAGTTTGTTCAAACATTCTGGATACTATAGAAACCCTGAAAGAGAAGATCCAGGAGTTAACAGAGGCTGTGGTTATGGCAGGGCCGGAGCGATCAAATACTTGTGAAGGCAGTACTCAAACAGAACAAGAGGAAGACTCTGTTCAGCTGACGATGGAACTGGCTGATACTCTGCAGCAACATGAGGAGGAGAGAAACAGACTTGAAGCTCTAGTCAAAGATTTAGAAAGTAGCCTGGAGCAGATGAAAGCCGAGTACGACAAGTGCGAGGAGTACTGGGCCGGCAAGGTGGAGGAGGAGCGGCGGCTGCACGGCGACGAGCAGCGCGCGGCCGACCAGCGCCTCGCGGACCTGGCGGCCAGGGTCCACGACTACGAGCGGCAGTTCGCGCTGCCGCCCATCGACGAGCGACCCAAGCTCGAGGCGCAGGTCAACGACCTGCAGGAGGAGTTCGCGCGCTACCGCCGCGACAAGGAGGCCGAGCTGGCGCGGCTGCGGGGCGAGGGCGCGGGGGCGGGGGGCGGGACGGGCGGCGCGGGGGGCGGTGCGGGGGGCGCGGGGCGGCGCGAGCTGCGGGCGCGGGCGGCGCGCGCCGAGGCGGCAGTGCGGCGGCTGCAGGCGCGGCTGGCGGCCGCAGACGTGCTGGTGCGGGACCTGTACGTGGAGAACTGCCAGCTGGCCAGCCGGGACCGGCTCTGA
Protein
MEESTMNHYEKQLYTVFKTFDVDNKEALDKNSVHALCDSLQLDGRGVQLVETLFGRPSDRVTFTQFRNGLLSVLDTDRSDPSVEPSTSDDADLELAPRYVFGSKKYGRRSRPPRPLETTSTPRASSASRLDSDHRRARHRPVCRRSSSAMESRDFESDDDYKPSAELDPGRQIDRSEALALCQGLNMEGVDRLIEHIFTQSTGTEMTVAEFFRRLDSELATTIREVRERSNTNPRTGSSESIEETRLSADNIIEAWENAGVPRPRALLAELGFKENAVNSVGLENILDEELRTLSSPVDERSLLLNAALAIARLQAKLLRERADATAAERDKLRADVADANARARLLAQEIDENHARLEAELKSNLKRAEARHAEAVRGASAEAAAERERTAVLSSRLQEEIKRRIEAETRLKVESEELKSRLEDTEVRLHRSEERVAEVERERTRLEAEVLVADRASAGRSPLSAEQGSAGEIETHIERLQLENLRLRDRIDELCAALEVQGRETVSTVVTGVDDLSAELGSLLYPNRAEECDSSPTSLDQKVLSHVEAVVKLRDLLDSLRKLSASQSTCEVCSNILDTIETLKEKIQELTEAVVMAGPERSNTCEGSTQTEQEEDSVQLTMELADTLQQHEEERNRLEALVKDLESSLEQMKAEYDKCEEYWAGKVEEERRLHGDEQRAADQRLADLAARVHDYERQFALPPIDERPKLEAQVNDLQEEFARYRRDKEAELARLRGEGAGAGGGTGGAGGGAGGAGRRELRARAARAEAAVRRLQARLAAADVLVRDLYVENCQLASRDRL

Summary

Interpro
IPR011992   EF-hand-dom_pair       
SUPFAM
SSF47473   SSF47473       

Ontologies

GO

Topology

Length:
803
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.04544
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00010
outside
1  -  803
 
 

Population Genetic Test Statistics

Pi
1.903064
Theta
5.689053
Tajima's D
-1.773428
CLR
0.76961
CSRT
0.0257987100644968
Interpretation
Uncertain
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