Gene

KWMTBOMO07559  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005859

Annotation

PREDICTED:_chitinase-3-like_protein_1_[Papilio_xuthus]

Location

Bomo_Chr12(-):17438934-17440386      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.361 PlasmaMembrane   Reliability : 1.04

CDS

ATGCGTTTAGATTACGATGGAATTCTGACGAAAGCGAGCCTTTTCATAGTCCTTGGAACTGCTGTATACATGTCGATGCTAACTCTGGTATATAGTGGTCAGCTGCATTCCAAAAGTCAGGATAATGTGTTCTTCATCCCAGTTACATCAGACATCAAAAGTAATACAGTAGTGTCTTGTTATTACAACACACCTGATAATGATGGCAAACAACTATTGCCAGCCAGTATTGACCCTCACCTGTGCACACACATCAATGTTGCATTTGCAAGAGTCATCGACAAAAAGATACATCTAGATGAATATCAATACCAAACTATAACTGAATTGTGCAAACTCAAACAGGAAAATCCTGCCCTTAAAGTATTGATTTCAGTGGGAGGTGCTGGAGAAGCTTCTGGTTTTAGAGACATGGTTGCCAATCATGCTTCTAGGAAAATTTTTATCAAATCAATCAAAACTATTCTAAGAAATTACAAATTAGATGGAATAGATTTAGACTGGGAGTTTCCAGAAGTGCACAAGCTTTATAAAATGAAAGGAAGTCGCGAGAGGCAACACTTCTCCCAGTTACTGCGTGAAATCAGAATGGAATATTTGAGGGAAAAGCGAGATTACCTGCTGACTGTAGCTGTTGCTGCTCCAGAGGCAATAGTTGATGTTTCCTACGATGTGCAGCAGATTAATAATTATGTAGACTATGTTAACATCATGACATATGACTACCACTATTATACTAAATACACTCCATTCACTGGCTTCAACTCCCCATTATTCTCAAGACCCTCGGAAAGTTTGTACATGGGCACACTTAATGTTAATTACACAGTCAACATGTATTTAAATAAAGGATTGGATCGAGATAAGATAGTTGTTGGAATACCAACATATGGACATTCATTTACTCTAGTGAATGCAGACAACCCAAATATTGGCAGTCCAGCTTCAGGCTACGGATCTCTAGGTTCACTAGGCTTTGTTAATTACCCAGATGTTTGCTTATTTGTAGCCAACAGTAATGTTAGAGTGATATTTGATGATCACGCAAAAGTGCCTTACTTATATAAACAGAAAGAATGGACCTCATTTGACTCAGCTCACAGTGTCATGGAGAAGGCAAAATATATAAAAGACAATAGACTACGAGGTGCTATGGTGTATTCATTAAATGCTGATGACTATGAAGGAAAATGTACTAGTAAAACAAATAACACCATACTGTTCCCTCTTGTTCAATCAATTAGGGACACTCTCATAACCAAAAGCACACAAGATGTTATACTTGTCTAA

Protein

MRLDYDGILTKASLFIVLGTAVYMSMLTLVYSGQLHSKSQDNVFFIPVTSDIKSNTVVSCYYNTPDNDGKQLLPASIDPHLCTHINVAFARVIDKKIHLDEYQYQTITELCKLKQENPALKVLISVGGAGEASGFRDMVANHASRKIFIKSIKTILRNYKLDGIDLDWEFPEVHKLYKMKGSRERQHFSQLLREIRMEYLREKRDYLLTVAVAAPEAIVDVSYDVQQINNYVDYVNIMTYDYHYYTKYTPFTGFNSPLFSRPSESLYMGTLNVNYTVNMYLNKGLDRDKIVVGIPTYGHSFTLVNADNPNIGSPASGYGSLGSLGFVNYPDVCLFVANSNVRVIFDDHAKVPYLYKQKEWTSFDSAHSVMEKAKYIKDNRLRGAMVYSLNADDYEGKCTSKTNNTILFPLVQSIRDTLITKSTQDVILV

Similarity

Belongs to the glycosyl hydrolase 18 family.

Uniprot

H9J8L7   A0A2H1WCM1   A0A0N1IFU3   A0A194PU30   A0A2W1BQG7   A0A2A4K0C3   + More
A0A0L7KVP9   A0A1L8E1M5   A0A1Y1JQQ8   A0A0T6AYA6   A0A0A1WME4   A0A0L0BUY6   A0A0K8U0Z8   U4TTQ9   N6SVA0   W8BXL9   A0A034VVU5   A0A2P0P9G2   A0A2J7QUX9   A0A1I8NSV0   A0A182V6E0   A0A026WFT6   Q7QFE2   A0A0K8TLZ9   A0A182W5G7   A0A067QY08   A0A182M3W6   A0A232F6F5   K7IT18   A0A310SRX5   A0A182N1A3   A0A0J7KR08   A0A2A3E0P8   V9IIB8   E2A7N2   A0A088A858   A0A182T4N0   A0A0M9A3Y2   E9I9P7   E2BWT8   A0A1J1HR99   A0A182FJA1   A0A1I8MB77   A0A195EVA5   A0A182PBK0   A0A151J0Q1   A0A182QCP1   A0A158NAE7   A0A151I0U7   A0A195CJY5   A0A1A9XXZ7   A0A0C9RT37   A0A182IUW3   A0A1B0BX17   A0A182XXU8   A0A1A9WA71   A0A084VLE5   A0A1A9Z8J7   A0A1B0FIC8   A0A1A9UM59   B4M6Y8   A0A1Q3FUW7   A0A182TNA2   B3MS63   A0A154P3X4   W5JST5   A0A3B0JDW9   B4PZ92   A0A0M3QZE6   Q16UV6   A0A1S4FND0   B4JXI2   A0A151X588   A0A182XDT0   B3NXX0   Q9W3V1   A0A1W4UVS0   A0A1B6E7G7   A0A1B6DPY5   B4L512   A0A1B6MSA9   A0A0C5CUD5   B4MT40   Q29I77   A0A0P4VGW2   A0A1B6FFK2   T1I6U9   A0A1B6FU96   A0A2S2RBL2   F4WMI9   B4GWJ5   A0A0A9VRR7   A0A0K8TAJ9   X1WJN6   A0A146L7K0   A0A146LM60   A0A023EZV2   A0A3Q0IW64  

Pubmed

19121390    26354079    28756777    26227816    28004739    25830018    + More
26108605    23537049    24495485    25348373    24508170    30249741    12364791    14747013    17210077    26369729    24845553    28648823    20075255    20798317    21282665    25315136    21347285    25244985    24438588    17994087    20920257    23761445    17550304    17510324    18057021    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25224926    15632085    27129103    21719571    25401762    27192063    26823975    25474469   

EMBL

BABH01038624    ODYU01007763    SOQ50813.1    KQ460642    KPJ13351.1    KQ459592    + More
KPI96921.1    KZ149931    PZC77329.1    NWSH01000292    PCG77687.1    JTDY01005326    KOB67109.1    GFDF01001538    JAV12546.1    GEZM01103172    JAV51492.1    LJIG01022620    KRT79591.1    GBXI01014073    JAD00219.1    JRES01001295    KNC23841.1    GDHF01032314    JAI20000.1    KB629993    ERL83318.1    APGK01055224    KB741261    ENN71614.1    GAMC01002508    JAC04048.1    KY426794    GAKP01012383    AQR60113.1    JAC46569.1    KU739357    ARA90534.1    NEVH01010480    PNF32392.1    KK107231    QOIP01000009    EZA54975.1    RLU18599.1    AAAB01008846    EAA06276.5    GDAI01002452    JAI15151.1    KK853123    KDR11066.1    AXCM01000448    NNAY01000889    OXU26053.1    AAZX01005110    KQ761155    OAD58156.1    LBMM01004181    KMQ92726.1    KZ288473    PBC25307.1    JR048928    AEY60805.1    GL437365    EFN70553.1    KQ435756    KOX75966.1    GL761846    EFZ22692.1    GL451188    EFN79802.1    CVRI01000020    CRK90600.1    KQ981954    KYN32173.1    KQ980629    KYN14993.1    AXCN02001239    ADTU01010268    ADTU01010269    ADTU01010270    KQ976600    KYM79475.1    KQ977642    KYN01040.1    GBYB01011830    JAG81597.1    JXJN01022027    ATLV01014483    KE524974    KFB38789.1    CCAG010018156    CH940653    EDW62555.1    GFDL01003671    JAV31374.1    CH902622    EDV34618.1    KQ434809    KZC06547.1    ADMH02000572    ETN65824.1    OUUW01000003    SPP78843.1    CM000162    EDX01059.2    CP012528    ALC49239.1    CH477613    EAT38324.1    CH916376    EDV95458.1    KQ982519    KYQ55484.1    CH954180    EDV47421.1    KQS30508.1    AE014298    AY118627    AAF46212.1    AAM49996.1    GEDC01003416    JAS33882.1    GEDC01009571    JAS27727.1    CH933811    EDW06271.1    GEBQ01001163    JAT38814.1    KM217110    AJO25037.1    CH963851    EDW75279.2    CH379063    EAL32776.1    GDKW01003007    JAI53588.1    GECZ01020783    GECZ01004445    JAS48986.1    JAS65324.1    ACPB03010146    GECZ01015973    GECZ01011686    JAS53796.1    JAS58083.1    GGMS01017957    MBY87160.1    GL888217    EGI64600.1    CH479194    EDW27079.1    KT717332    GBHO01044532    GBHO01013142    GBHO01007575    GBHO01007544    GBHO01007509    GBHO01003362    GBHO01003360    ANC95006.1    JAF99071.1    JAG30462.1    JAG36029.1    JAG36060.1    JAG36095.1    JAG40242.1    JAG40244.1    GBRD01003267    GBRD01000243    JAG62554.1    ABLF02037631    GDHC01015989    JAQ02640.1    GDHC01016291    GDHC01009515    GDHC01005383    JAQ02338.1    JAQ09114.1    JAQ13246.1    GBBI01003937    JAC14775.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000218220    UP000037510    UP000037069    + More
UP000030742    UP000019118    UP000235965    UP000095300    UP000075903    UP000053097    UP000279307    UP000007062    UP000075920    UP000027135    UP000075883    UP000215335    UP000002358    UP000075884    UP000036403    UP000242457    UP000000311    UP000005203    UP000075901    UP000053105    UP000008237    UP000183832    UP000069272    UP000095301    UP000078541    UP000075885    UP000078492    UP000075886    UP000005205    UP000078540    UP000078542    UP000092443    UP000075880    UP000092460    UP000076408    UP000091820    UP000030765    UP000092445    UP000092444    UP000078200    UP000008792    UP000075902    UP000007801    UP000076502    UP000000673    UP000268350    UP000002282    UP000092553    UP000008820    UP000001070    UP000075809    UP000076407    UP000008711    UP000000803    UP000192221    UP000009192    UP000007798    UP000001819    UP000015103    UP000007755    UP000008744    UP000007819    UP000079169   

PRIDE

H9J8L7    Q9W3V1   

Pfam

PF00704   Glyco_hydro_18        + More
PF03188   Cytochrom_B561

Interpro

IPR029070   Chitinase_insertion_sf        + More
IPR001223   Glyco_hydro18_cat       
IPR001579   Glyco_hydro_18_chit_AS       
IPR017853   Glycoside_hydrolase_SF       
IPR011583   Chitinase_II       
IPR006593   Cyt_b561/ferric_Rdtase_TM       

SUPFAM

SSF51445   SSF51445        + More
SSF54556   SSF54556       

Gene 3D

3.10.50.10    

ProteinModelPortal

H9J8L7   A0A2H1WCM1   A0A0N1IFU3   A0A194PU30   A0A2W1BQG7   A0A2A4K0C3   + More
A0A0L7KVP9   A0A1L8E1M5   A0A1Y1JQQ8   A0A0T6AYA6   A0A0A1WME4   A0A0L0BUY6   A0A0K8U0Z8   U4TTQ9   N6SVA0   W8BXL9   A0A034VVU5   A0A2P0P9G2   A0A2J7QUX9   A0A1I8NSV0   A0A182V6E0   A0A026WFT6   Q7QFE2   A0A0K8TLZ9   A0A182W5G7   A0A067QY08   A0A182M3W6   A0A232F6F5   K7IT18   A0A310SRX5   A0A182N1A3   A0A0J7KR08   A0A2A3E0P8   V9IIB8   E2A7N2   A0A088A858   A0A182T4N0   A0A0M9A3Y2   E9I9P7   E2BWT8   A0A1J1HR99   A0A182FJA1   A0A1I8MB77   A0A195EVA5   A0A182PBK0   A0A151J0Q1   A0A182QCP1   A0A158NAE7   A0A151I0U7   A0A195CJY5   A0A1A9XXZ7   A0A0C9RT37   A0A182IUW3   A0A1B0BX17   A0A182XXU8   A0A1A9WA71   A0A084VLE5   A0A1A9Z8J7   A0A1B0FIC8   A0A1A9UM59   B4M6Y8   A0A1Q3FUW7   A0A182TNA2   B3MS63   A0A154P3X4   W5JST5   A0A3B0JDW9   B4PZ92   A0A0M3QZE6   Q16UV6   A0A1S4FND0   B4JXI2   A0A151X588   A0A182XDT0   B3NXX0   Q9W3V1   A0A1W4UVS0   A0A1B6E7G7   A0A1B6DPY5   B4L512   A0A1B6MSA9   A0A0C5CUD5   B4MT40   Q29I77   A0A0P4VGW2   A0A1B6FFK2   T1I6U9   A0A1B6FU96   A0A2S2RBL2   F4WMI9   B4GWJ5   A0A0A9VRR7   A0A0K8TAJ9   X1WJN6   A0A146L7K0   A0A146LM60   A0A023EZV2   A0A3Q0IW64  

PDB

5WVH     E-value=7.8076e-63,     Score=610

KEGG

101737108    K01183 chitinase [EC:3.2.1.14] | (RefSeq) chitinase-3-like protein 1

PATHWAY

00520    Amino sugar and nucleotide sugar metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0005975   GO:0004553   GO:0008061   GO:0016021   GO:0006032   GO:0004568   GO:0005737   GO:0005576   GO:0030246   GO:0055114   GO:0016798   GO:0008152   GO:0030170   GO:0015914   GO:0016020   GO:0003707   GO:0051537  

Length:

429

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

22.21409

Exp number, first 60 AAs:

22.18164

Total prob of N-in:

0.99339

POSSIBLE N-term signal

sequence

inside

1  -  12

TMhelix

13  -  35

outside

36  -  429

 

 

Pi

0.549168

Theta

6.740461

Tajima's D

-2.613899

CLR

25.638406

CSRT

9.99950002499875e-05

Interpretation

Uncertain