Silkworm Genome Informatics Database

Gene

KWMTBOMO07553

Pre Gene Modal

BGIBMGA005863

Annotation

PREDICTED:_glutamate_receptor_2-like_[Bombyx_mori]

Location

Bomo_Chr12(-):17318058-17348646 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 4.842

CDS

ATGTGGGGCGCTCAAAGACGCGTGACGCTCGATGTGCTGCTCATCTGTTGGGGCATCGGCACCTGGCTCGGAGTGAACGGTCTCTACGTGCAGCTACCTCTGCTCGTCGAGAGGCTGCCCGAGGGCTGGGCCCTGCCGTCCTCGCTGGTGCTGGCCGTGCAGCTCGCCAACATTGGGCCCATTCTGTACGGTCTGCTGGGCCGGCTACGGCCCCACGCTTCAGACTCGCCCTACATCTACGGGCTGCTGATAGTCGGGACGCTGTCGCTCATCATCAACGCGTTCGTCTACGACATGACTACCGTGATAGGGGGGGCGGACCGCTCGCTGCCTTTCCTCGCGCTGGTGTTCGGCGCGGCTCTCGTCGGATGCACCAGCTCAGTGTTGTTCTATCCGTATTTAAGACATTTTCGGGATATTTATTTGGCGACGTACTTAGTGGGCGAAGGTCTGAGTGGATTCCTGCCAAGCATCCTTTCTCTCATCCAAGGCGTCGGCGGAGAGCCCGAGTGCTTGCCCTCCGAGGACAGCACGCAGCTCGTACCGCACTACCCGCCGCCCTTGTTCAGCACGACCGTGTTCCTCGTAATACTCGGAGCGATGTCGGCCATGAGTCTCATTAGTTTTTTCATAATAAACAATTATAGAGTGTTCGACTCTGAAAAAGTGACACAGACAGTTGAGACGAAAGACGAGAATATAGTAGAGGAGCGGGAGTCGCTCGTCGCGCCGAAGTGGGTCGGGGTGCTGGTGTTCATGGTGTTGCTGAACGCGGTGAACAACGGGCTGATGCCGTCGATCCAGTCGTACTCGTGCATGCCGTACGGCACGCGGGCCTACCACCTGGCCGTGACGCTGGGCGCCATGGCCAACCCGGTGGCGTGCCTGGCGGGCGTGTGGCTGCGGCCCGTGGGCGCGCGCGTGCTGGCCGGCATGCTGCTCGCCGCGCTCGTCCCCTTCGTCTACATGACGGTCACGGCGCTCATGAGCCCCGCGCCGCCGCTGCAGTACGACGTCATCGGCGAAGTCTTGATCGTGTTCTCGTGGGTGGTGGTGTCGGGGGTGGTGTCGTACGCGCGCATGTGGGTGTACGGGTGGGTGCGGCGCGGGGGGGCGCGCGGCATGCGGGTGTGCGGCGCCGTCACGCAGCTGGGCTCGGCCTCGGGCTCCGCCGTCATGTACTTCGTCGTCAACTTTACCAAGCTCTTCGTGCAGCCCGATTTTTCAAGGGTTGCTCGAGACGGTTCCCTCAGAGTTAACATTCAGAATAACTTCGCTAATGCACCGGAGCTACCGGCGTACGACTTCCGCCGAGAAGGAGTTGTTTTGGACTTGAACTGCCCTAACTCTAAACTTATCCTTGAAAAGGCATCTAAAAACCGGGCATTTATTCACCGCTACACGTGGCTTCTCATTCATAACTCTACGTACAAGTTGGAAACAATCCAGAAGATTCTATCGGACGCGGCTGTACTCCCTGACGCGGACGTCACCTGGTGCGCTGCAGACGACATACTCGATATTCATAGACTCAACGAACACCAACCCTATGTCGTGATGGACTTGGGCTTATCTGTTAATAGCACTATTGAGGATCTGGACGCTGTGTGGAGCACAATACCGACAGCAGCTACCAGGAGGAGGCATTTAAATAACTTAACCATAAACGCTGTTGTCATTGTCTCACAGCCGCAGTACTTCAAAGGCTGGTCGGACCTCTCCAACAGACAGATCGACACTTTTCCGAAACTGACGTACCCGATGCTGATGCTCTGTGCAGAAGACTTGCGTTTCCGGTTTAATCTCAAGCAAGTGGACGAGTACGGCGTGGAGTTGAATGGGTCATTCACGGGCACGGTCGGGCTGCTGCAGCGCGGCCGGGCGGAGCTCGGAGTGGCCTCCATGTTCATGAGGTCCGACCGCTGGAGGGTGCTGCACTTTAGCTCCGAGACTGTAGCGCTGCTTAACGCGTTCATGTTCCGAGCCCCGGCGCAGTCGTCGGTGTCCAACATATTCCTGTTGCCACTGAGTCGCGGGGTGTGGTGCTGCGCCGCCGCCCTGCTCTGCGGCAGCGCGGTGCTGCTGGCCGTCCTGTCCTGCCGACTTGTCGCTGCGGACCCTACCCTGCAGCTGCTGACCCTCCCCGAAATATTTGTATTCTCCATCGGAACTGTTTGTCAACAAGGGTTCTACATCATGCCGAAGCTGTCATCAATCCGCATGATAATGTTCCTAACTCTGCTGACGTCATTATTCACATTCACTGCGTACTCCGCGAAGATCGTGGCCATCCTGCAGACCCCCAGCGCCGCGGTGAGGACGGTGGCCGACCTCGCTGACTCCCACATGGACGTGGGCATTCAGGAGACCACCTATAAGAAGGTTTACTACGCTGAGAGCACGGACCCCAGCATCCTCCGTCTGTTCCATCGCAAGGTGGCTCCGCTGGGCGAGCGCGTCTACATGTCCGTGGTGGAAGGAGTCGAACGCATGAGGACTGGACTCTTCGCTTTTCAGGTGGAACGCAGTTCTGGGTATGAAATCATCAGCAAGACATTTACCGAAAGCGAAAAGTGTGGTCTGATGGAGATCGAAGCGTTCAAGCTGCCGATGGTGGCCGTGCCGCTCAGGAAGCACTCCGGATACCGGGAGCTGTTCGGCACGAGGTTGCGTTGGCAGCGCGAGGTGGGGCTGATGTCGCGGGTCCGCGCCATATGGCTGGCGGCCCGGCCGCGCTGTGAAGGTCGCGGTGTTGGCTTCCGGGCGGTACGGCTGCTCGACATGCTGCCTGCCCTACAGATGCTCGCAGCCGGAGGACTTGTTGCCGTCGTTTTACTCATCCTAGAAAATGTATATCACCACTACTCCAGAACAGGGAATGTTTTGCGTCGGAGCACGGCACTACCATCCGCGGTCGTGGCTGCACTATGGATCCCTTAG

Protein

MWGAQRRVTLDVLLICWGIGTWLGVNGLYVQLPLLVERLPEGWALPSSLVLAVQLANIGPILYGLLGRLRPHASDSPYIYGLLIVGTLSLIINAFVYDMTTVIGGADRSLPFLALVFGAALVGCTSSVLFYPYLRHFRDIYLATYLVGEGLSGFLPSILSLIQGVGGEPECLPSEDSTQLVPHYPPPLFSTTVFLVILGAMSAMSLISFFIINNYRVFDSEKVTQTVETKDENIVEERESLVAPKWVGVLVFMVLLNAVNNGLMPSIQSYSCMPYGTRAYHLAVTLGAMANPVACLAGVWLRPVGARVLAGMLLAALVPFVYMTVTALMSPAPPLQYDVIGEVLIVFSWVVVSGVVSYARMWVYGWVRRGGARGMRVCGAVTQLGSASGSAVMYFVVNFTKLFVQPDFSRVARDGSLRVNIQNNFANAPELPAYDFRREGVVLDLNCPNSKLILEKASKNRAFIHRYTWLLIHNSTYKLETIQKILSDAAVLPDADVTWCAADDILDIHRLNEHQPYVVMDLGLSVNSTIEDLDAVWSTIPTAATRRRHLNNLTINAVVIVSQPQYFKGWSDLSNRQIDTFPKLTYPMLMLCAEDLRFRFNLKQVDEYGVELNGSFTGTVGLLQRGRAELGVASMFMRSDRWRVLHFSSETVALLNAFMFRAPAQSSVSNIFLLPLSRGVWCCAAALLCGSAVLLAVLSCRLVAADPTLQLLTLPEIFVFSIGTVCQQGFYIMPKLSSIRMIMFLTLLTSLFTFTAYSAKIVAILQTPSAAVRTVADLADSHMDVGIQETTYKKVYYAESTDPSILRLFHRKVAPLGERVYMSVVEGVERMRTGLFAFQVERSSGYEIISKTFTESEKCGLMEIEAFKLPMVAVPLRKHSGYRELFGTRLRWQREVGLMSRVRAIWLAARPRCEGRGVGFRAVRLLDMLPALQMLAAGGLVAVVLLILENVYHHYSRTGNVLRRSTALPSAVVAALWIP

Uniprot

NA

ProteinModelPortal

NA

PDB

4UQQ E-value=1.34343e-10, Score=163

KEGG

101739734 no KO assigned | (RefSeq) glutamate receptor 2-like

GO

GO:0004970 GO:0016020 GO:0005887 GO:0032217 GO:0032218 GO:0015914 GO:0016021 GO:0003707 GO:0051537

Length:

979

Number of predicted TMHs:

15

Exp number of AAs in TMHs:

321.316169999999

Exp number, first 60 AAs:

37.43669

Total prob of N-in:

0.99973

POSSIBLE N-term signal

sequence

inside

1 - 11

TMhelix

12 - 34

outside

35 - 43

TMhelix

44 - 66

inside

67 - 77

TMhelix

78 - 97

outside

98 - 111

TMhelix

112 - 134

inside

135 - 140

TMhelix

141 - 163

outside

164 - 189

TMhelix

190 - 212

inside

213 - 241

TMhelix

242 - 264

outside

265 - 278

TMhelix

279 - 301

inside

302 - 307

TMhelix

308 - 330

outside

331 - 344

TMhelix

345 - 367

inside

368 - 643

TMhelix

644 - 661

outside

662 - 675

TMhelix

676 - 698

inside

699 - 710

TMhelix

711 - 733

outside

734 - 742

TMhelix

743 - 765

inside

766 - 928

TMhelix

929 - 948

outside

949 - 979

Pi

24.728833

Theta

21.512284

Tajima's D

0.440914

CLR

0.677678

CSRT

0.503624818759062

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics