SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07533
Pre Gene Modal
BGIBMGA005887
Annotation
PREDICTED:_uncharacterized_protein_LOC101740448_[Bombyx_mori]
Location
Bomo_Chr12(-):16690981-16693469      View in EpiBrowser
Location in the cell
Extracellular   Reliability : 2.752
 

Sequence

CDS
ATGAGAGTCAAAAGGAGCGTGCACGTGAGGCTCATTGCCTTATGTACGACATGCATGCTGCTCCAAGCGATGGCGTGCCCCTCGCAATGTATATGCAAATGGAAAAACGGAAAACGGTACGTAGAGTGCTCGGAGAAAGACCTCAAAGCGATACCCGACTCGCTTGACTCTGAAACACAAGTCCTAGACTTCACCGGCAACGATCTTCAAGTGCTGCAAAAGGAAACCTTTCACAAACTCAAACTGATCGATCTGCAGAAGATTTACTTGCAGCGATGTCGACTGCAGAAAATAGACAGCCAAGCGTTCAAAGGTCTCGCTAACTTGGTGGAATTGGACCTTTCCAACAATTATTTGAACCTCGTACCCTCGAGTAACTTCGTGTTTATCCCGTCGCTAATGAGACTGTCGATCAATAACAATCCAATCGCGAGTATCAAAACACATTGTTTCCAACATCTCTCCTATCTGAACACGTTGGAGCTGAGCGATTGTAAAATAGAAGCGATCGAGAGAGACGCATTTGCCGGTTTGAATCACCTTGAATGGCTGCGACTGAGCGGGAATAAACTATCGAATATTCAGGGAGAAAATTTATTTCCCGATACGCTGCGGGGGATCAACCTGCAAAATAATAATTGGAACTGCGATTGCCACTTGAGGGATTTGCATAGTTGGCTGTTGAATTTCAATATGCCGCACGCCGTCGAGCCCGCTTGCTCGCTTCCAGAACGCTTGAAGAAACGGACCATCACCAGCATTTCGGAGAACGAGCTGGCCTGCCTACCGAAAATGAGCCCTACGTCTGTGTACGTAGAGACGAACGCCGGCAACAATGTGACGCTCGAATGCTTAGTGAAAGCAATCCCCGAAGCGAAAATAACGTGGTTATACCAGGGACAGATCATTCATAATTATTCGACCATGTCGCCGGATCCCCGAATATATTACGTCGAGAACGGCGTCACCGACAAAAAGAGTGAATTGTACATTATGGGCATAAGTAACGAGGATAACGGTACGTACACATGTGCCGCTGAGAACCCCGCCGGTCGGGCACGTGCCAATTACACGCTCAGGATCCTAGTGAAAGAGGAACCGGTCGTTATCGTTATACTGCCATCGAGTCGCAGCAATGGTAACATACCTAAAAATAACGGGAGCTTAATAGTGAACGCGCACTCTCATCACGCACTGCACTACACGGTACAAACGAACCGTGATTACGAGCCAAGCGATGTGTATCAAAGCAATAACATGAAAGGCTTCGTCGACAGAAATCCCGACCTAATTAGCGACGCGGAAACAGTAGCAAACAATGCGCAAAACGAGAACACAGCGTTATCAGTGTACAAAGCGCAGAGCGTGGGGGGCGACGGGTTTGAAGAGGAGACCGTATTCACGGCAGCCTCCGTGCCGCGGCAGGTCACGTGGCAAGACCAACAGCCCGTAAACAACATGAACTTGCCGCAAAACACATTAAACAATATGTACCAGCACTCAGCTGACGTGCACCTCAATCCGGGCTGCTTCCTCGACAGCGAAGGCTATCCGTACGATTATGGTCTACCAAAGCATCCGTGCCGACCTCCCATTATGTCAAATTATTCGGTTGTTGGCCCGTTTTACCAGACCTTACCCCACAACAGGCCTAAGAACCAGAAATTAGTTTGCAAATTCGCGAAAGACACAGAGTTCAATACGGCACAGCCGACGTGCCCTAATTTCGAAATGTACAATATGACGACGAACGTGCGCCGTACCTTAGAGGGCTACCCCGTTCCGAGAAACAGGCAAATAGCTTTTGTAGGGAACGGCACTGTGTATTACAATGACGAATTCGTTCCTTCGCCACCGGAAGGCTACAAAACCGACCCGATGCAGTACTGCGCAACCGAACCCTGTCCGTCGTGGAACCCTAAAGGGACTTGTGCAGTCATGGTGCCCATGAGTGTGACGGAGGGACCCGGACGATGTTACCAAGTTGAGACTAGATGCGTGGACACTCAGACCAGTGCGTCGGACGCTCGCATGCCCGCGGAAGGCATCGAGAGCGTCCTCAAACCTTTACCGCAGGTATCAAATGTGAAATGTGCCGGGGATATTTGTTCGGAGAGCCCTGACGAGGGCTACGTGGGGGACGCTAACGATATCTGA
Protein
MRVKRSVHVRLIALCTTCMLLQAMACPSQCICKWKNGKRYVECSEKDLKAIPDSLDSETQVLDFTGNDLQVLQKETFHKLKLIDLQKIYLQRCRLQKIDSQAFKGLANLVELDLSNNYLNLVPSSNFVFIPSLMRLSINNNPIASIKTHCFQHLSYLNTLELSDCKIEAIERDAFAGLNHLEWLRLSGNKLSNIQGENLFPDTLRGINLQNNNWNCDCHLRDLHSWLLNFNMPHAVEPACSLPERLKKRTITSISENELACLPKMSPTSVYVETNAGNNVTLECLVKAIPEAKITWLYQGQIIHNYSTMSPDPRIYYVENGVTDKKSELYIMGISNEDNGTYTCAAENPAGRARANYTLRILVKEEPVVIVILPSSRSNGNIPKNNGSLIVNAHSHHALHYTVQTNRDYEPSDVYQSNNMKGFVDRNPDLISDAETVANNAQNENTALSVYKAQSVGGDGFEEETVFTAASVPRQVTWQDQQPVNNMNLPQNTLNNMYQHSADVHLNPGCFLDSEGYPYDYGLPKHPCRPPIMSNYSVVGPFYQTLPHNRPKNQKLVCKFAKDTEFNTAQPTCPNFEMYNMTTNVRRTLEGYPVPRNRQIAFVGNGTVYYNDEFVPSPPEGYKTDPMQYCATEPCPSWNPKGTCAVMVPMSVTEGPGRCYQVETRCVDTQTSASDARMPAEGIESVLKPLPQVSNVKCAGDICSESPDEGYVGDANDI

Summary

Uniprot
H9J8P5   A0A2W1BUQ3   A0A2A4JBD0   A0A2H1X1H5   A0A0L7KVM3   A0A0N1IFT0   + More
A0A194Q0E5   A0A212FFY7   A0A1Y1LJV1  
Pubmed
19121390    28756777    26227816    26354079    22118469    28004739    + More
EMBL
BABH01030233    KZ149931    PZC77364.1    NWSH01002279    PCG68703.1    ODYU01012726    + More
SOQ59173.1    JTDY01005307    KOB67131.1    KQ460642    KPJ13323.1    KQ459592    KPI96885.1    AGBW02008744    OWR52644.1    GEZM01058145    JAV71866.1   
Proteomes
UP000005204    UP000218220    UP000037510    UP000053240    UP000053268    UP000007151    + More
PRIDE
H9J8P5   
Pfam
PF13855   LRR_8        + More
PF07679   I-set
PF00560   LRR_1
PF01463   LRRCT
Interpro
IPR003591   Leu-rich_rpt_typical-subtyp        + More
IPR001611   Leu-rich_rpt       
IPR036179   Ig-like_dom_sf       
IPR003598   Ig_sub2       
IPR013783   Ig-like_fold       
IPR003599   Ig_sub       
IPR000483   Cys-rich_flank_reg_C       
IPR007110   Ig-like_dom       
IPR013098   Ig_I-set       
IPR032675   LRR_dom_sf       
SUPFAM
SSF48726   SSF48726       
Gene 3D
2.60.40.10     3.80.10.10    
ProteinModelPortal
H9J8P5   A0A2W1BUQ3   A0A2A4JBD0   A0A2H1X1H5   A0A0L7KVM3   A0A0N1IFT0   + More
A0A194Q0E5   A0A212FFY7   A0A1Y1LJV1  
PDB
6F2O     E-value=4.71307e-26,     Score=295

Ontologies

KEGG
101740448    no KO assigned | (RefSeq) uncharacterized LOC101740448
GO
GO:0016021   GO:0005515   GO:0016887   GO:0016020   GO:0004190   GO:0006508   GO:0015914   GO:0003707   GO:0051537  

Topology

SignalP
Position:   1 - 25,         Likelihood:  0.980041
 
 
Length:
718
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
10.45946
Exp number, first 60 AAs:
10.4324
Total prob of N-in:
0.53265
POSSIBLE N-term signal
sequence
outside
1  -  718
 
 

Population Genetic Test Statistics

Pi
18.844255
Theta
16.215713
Tajima's D
0.732071
CLR
0.012762
CSRT
0.594270286485676
Interpretation
Uncertain
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