Gene

KWMTBOMO07528  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005889

Annotation

PREDICTED:_GRIP_and_coiled-coil_domain-containing_protein_1_isoform_X2_[Amyelois_transitella]

Location

Bomo_Chr12(-):16427968-16439429      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.896 Cytoskeletal   Reliability : 1.625

CDS

ATGGAATCATTATCAAAACAAGAGCTAATATCTACCATAACAAAACAAGCTGATCAGATAAAACGATACGAATCACGTTTACGGGATGTAGTCACAGCTTACAAGGGCTTGGTTAAAGAGAAAGAAGCATTAGAGATCAGCTTGAAGGCACTCAACAAGACTGAAAACACTATAGATGGAAGTGAAGATGATTCGGTCACAGCCCTCACTCTGTCTCTTTCTACCCTCACAGTGGAGAAAGCTCGCATGGAAGAAGCTTTCCAGGCAGACAAAAAAGTTACAAGGGATAAGTATGAGAACATGTTAGCGGCACTGAGAGAGGAGAATAAAATGCTATCGCAGCAACATTTGCTGGAGCTTAACAGTCTGAAAGCCAAGATAGCCTACGAGATACAAGAGAGGGAGAAGGAGAGAGCTGATCATGTTGCTATGATGAAAGAGTTGCATTTGAAATTGAACAGCGAAAGGAAGACGAAAGAGAAATTAGAAGACCGAGTAGTTAATTCAACTGAAGCTCAAGCGTCACAAGCCGAGCTAGAGAAGCGAGTTAGAGATCTGAGCAGTTCCTTGGAGGCAGCCCAAAGGAGGCTGCAGCGTGCCGAAGCCCGGACTGTTGAGACTCCAGCCCAATTAGTCAGGCTTCAGCAAAAATTGGCGCTGATCGAGCAATCACATTCAGTCGCTATCAGAGAAGAACAAATAAAAGCGAAAAGGGCTGAAGAATCTGCCAGGAAGATCTGTGCCCGTCAAGAAGAAAGAGTCGCGCTGCTAGAAGGAAAACTAGCTGAACTCTCAGAGACTATAGGACAGTACGATTTGAGGAGACGCCGCGACCAACAGCTGATACAGCAACTTAGAGATTCTATAAATGGGAGGCTGCTTGAGAAGATCGCTCCGGCTACGATTGAAGAAAACACTCCGGTCCAACTTAGCGAAACGGACAACGAGAAGTTGGCGGACAGCGAATATCTACAAACGTTAATCGACAAAATACACATCCTGAAGAAGGAATTGATATCGGAGAACGACAAGCAGGGCTCGCCCATAGACGTCGCCGCCGTGTTCCAAATCGAAGGGTTCGGTGACGTTCATCTCAAGTGCAGGGAGGATTACGAGAAGCTGCGTCTGGAGTTGGAGGAGGAGCGAGCACGTAGCTCCAGGGAGGGCGTCGAACCGCGACCCTCCTCGCCAGCTCTGCGCCACGACCTCGCGCTGCTCGCCGACCAGCTGCACACCTGCAAGCTGATGCTGGACGAGGAGAAGCAAGACAAAATCGACGCCCTGAGGATCTGCGAGGAGAAATTGAAAAATGAAGAGGAATACCACAGGGAGGTAACGACGGACCTGAAGAACAGGATCCACGTCCTCGAGAAGCAGGTCGCGACGCAGAGGGAGAGGTACGCCGCGCTGCTGGACGAGACGGACAGCTACATCCGCGGCAGGAACGAGCGGAAGGTCAGCAATGAGGAACACAACGTGTTTGCTGATGTGTCAGCGCCTCCCCACATGTTGCATTACGCCCACGAGCTCGCCCGGAAGGACCAGGACATATCGCAGCTCAGGAAGGACAAGCATCTGCTCGAGGGCCAGTACAGAGACTGCCAACGAGACGCGACCATAGAGAAAGAGCGCTTCAAAGAAGTCGTCAGAGCGCTGAAAGAGGAGATTGACAGATTAAGAAGAACGCAATCCCGTGAAGGTGCAAATTTAGAGTATTTGAAGAACGTTGTGCTCGCTTACTTGATGTCCACGGACTACGCCGGCAAGAGGCACATGCTAAACGCTATAGCCGCCGTGTTGCATTTCACTAACGCCGAACGTCACTCCGTGCTGTCTACTTTGTAA

Protein

MESLSKQELISTITKQADQIKRYESRLRDVVTAYKGLVKEKEALEISLKALNKTENTIDGSEDDSVTALTLSLSTLTVEKARMEEAFQADKKVTRDKYENMLAALREENKMLSQQHLLELNSLKAKIAYEIQEREKERADHVAMMKELHLKLNSERKTKEKLEDRVVNSTEAQASQAELEKRVRDLSSSLEAAQRRLQRAEARTVETPAQLVRLQQKLALIEQSHSVAIREEQIKAKRAEESARKICARQEERVALLEGKLAELSETIGQYDLRRRRDQQLIQQLRDSINGRLLEKIAPATIEENTPVQLSETDNEKLADSEYLQTLIDKIHILKKELISENDKQGSPIDVAAVFQIEGFGDVHLKCREDYEKLRLELEEERARSSREGVEPRPSSPALRHDLALLADQLHTCKLMLDEEKQDKIDALRICEEKLKNEEEYHREVTTDLKNRIHVLEKQVATQRERYAALLDETDSYIRGRNERKVSNEEHNVFADVSAPPHMLHYAHELARKDQDISQLRKDKHLLEGQYRDCQRDATIEKERFKEVVRALKEEIDRLRRTQSREGANLEYLKNVVLAYLMSTDYAGKRHMLNAIAAVLHFTNAERHSVLSTL

Uniprot

H9J8P7   A0A3S2NKX5   A0A2A4IZU8   A0A2H1W8P2   A0A194PU86   A0A2J7QT67   + More
A0A067RDJ0   A0A1B0CJP6   A0A0K8TTZ7   A0A1A9WU46   A0A1I8PXH1   T1PAT1   A0A1A9VPG0   A0A1I8M7C7   A0A1B0AVK7   A0A2J7QT75   A0A1A9XU66   B4KCZ7   A0A146L3I8   B4LZI2   A0A1B0GCV6   A0A336LYK2   B4JUV3   B4GLI0   Q293X2   B3NZH2   A0A1W4ULW0   A0A3B0K5U1   B4HIC2   Q9VGR1   B4QU59   A0A1B6CLB2   B4PM32   A0A0L0BNZ5   A0A0A1WKT4   R4G5F2   U5EV90   A0A069DZE9   E9HAQ0   A0A0K8UC07   A0A034VN35   B4NIH2   A0A0K8T8F2   A0A0P5C1A5   A0A0A9YT43   A0A023F9E1   A0A1S3I5X6   A0A2J7QT60   W8BJG6   A0A2T7NXS5   V4AYZ5   A0A2J7QT41   A0A2J7QT65   A0A1B6GA87   A0A0A1WE29   A0A2C9KQA9   C3Y683   A0A2H8TT07   A0A1B6JTI9   E0VC45   Q3ZAL1   F4WIB3   A0A069DVV9   A0A195BLB6   A0A182VPT4   A0A1J1IG32   A0A224XLJ7   A0A182G1X6  

Pubmed

19121390    26354079    24845553    26369729    25315136    17994087    + More
26823975    15632085    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    26108605    25830018    26334808    21292972    25348373    25401762    25474469    24495485    23254933    15562597    18563158    20566863    21719571    26483478   

EMBL

BABH01030258    RSAL01000332    RVE42484.1    NWSH01004215    PCG65345.1    ODYU01006980    + More
SOQ49316.1    KQ459592    KPI96882.1    NEVH01011202    PNF31763.1    KK852771    KDR16884.1    AJWK01014826    GDAI01000005    JAI17598.1    KA645028    AFP59657.1    JXJN01004287    PNF31764.1    CH933806    EDW13767.1    GDHC01015661    GDHC01007338    JAQ02968.1    JAQ11291.1    CH940650    EDW67121.1    CCAG010002237    UFQT01000290    SSX22880.1    CH916374    EDV91273.1    CH479185    EDW38404.1    CM000070    EAL29092.1    CH954181    EDV49545.1    OUUW01000007    SPP83420.1    CH480815    EDW42637.1    AE014297    AY118893    AAF54615.1    AAM50753.1    CM000364    EDX13390.1    GEDC01023041    JAS14257.1    CM000160    EDW96898.1    JRES01001582    KNC21731.1    GBXI01015162    JAC99129.1    GAHY01000021    JAA77489.1    GANO01003512    JAB56359.1    GBGD01000760    JAC88129.1    GL732612    EFX71220.1    GDHF01028112    JAI24202.1    GAKP01015063    JAC43889.1    CH964272    EDW84795.1    GBRD01003994    JAG61827.1    GDIP01177039    GDIQ01136140    JAJ46363.1    JAL15586.1    GBHO01010869    JAG32735.1    GBBI01001179    JAC17533.1    PNF31766.1    GAMC01005130    JAC01426.1    PZQS01000008    PVD25980.1    KB200129    ESP02933.1    PNF31761.1    PNF31767.1    GECZ01010427    JAS59342.1    GBXI01017614    JAC96677.1    GG666487    EEN64480.1    GFXV01005522    MBW17327.1    GECU01005237    JAT02470.1    DS235047    EEB10951.1    BT023858    AAZ86779.1    GL888175    EGI66044.1    GBGD01000844    JAC88045.1    KQ976440    KYM86480.1    CVRI01000047    CRK98492.1    GFTR01007403    JAW09023.1    JXUM01138109    JXUM01138110    KQ568682    KXJ68920.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000053268    UP000235965    UP000027135    + More
UP000092461    UP000091820    UP000095300    UP000078200    UP000095301    UP000092460    UP000092443    UP000009192    UP000008792    UP000092444    UP000001070    UP000008744    UP000001819    UP000008711    UP000192221    UP000268350    UP000001292    UP000000803    UP000000304    UP000002282    UP000037069    UP000000305    UP000007798    UP000085678    UP000245119    UP000030746    UP000076420    UP000001554    UP000009046    UP000007755    UP000078540    UP000075920    UP000183832    UP000069940    UP000249989   

PRIDE

H9J8P7    Q9VGR1    Q3ZAL1   

Pfam

PF01465   GRIP

Interpro

IPR000237   GRIP_dom       

ProteinModelPortal

H9J8P7   A0A3S2NKX5   A0A2A4IZU8   A0A2H1W8P2   A0A194PU86   A0A2J7QT67   + More
A0A067RDJ0   A0A1B0CJP6   A0A0K8TTZ7   A0A1A9WU46   A0A1I8PXH1   T1PAT1   A0A1A9VPG0   A0A1I8M7C7   A0A1B0AVK7   A0A2J7QT75   A0A1A9XU66   B4KCZ7   A0A146L3I8   B4LZI2   A0A1B0GCV6   A0A336LYK2   B4JUV3   B4GLI0   Q293X2   B3NZH2   A0A1W4ULW0   A0A3B0K5U1   B4HIC2   Q9VGR1   B4QU59   A0A1B6CLB2   B4PM32   A0A0L0BNZ5   A0A0A1WKT4   R4G5F2   U5EV90   A0A069DZE9   E9HAQ0   A0A0K8UC07   A0A034VN35   B4NIH2   A0A0K8T8F2   A0A0P5C1A5   A0A0A9YT43   A0A023F9E1   A0A1S3I5X6   A0A2J7QT60   W8BJG6   A0A2T7NXS5   V4AYZ5   A0A2J7QT41   A0A2J7QT65   A0A1B6GA87   A0A0A1WE29   A0A2C9KQA9   C3Y683   A0A2H8TT07   A0A1B6JTI9   E0VC45   Q3ZAL1   F4WIB3   A0A069DVV9   A0A195BLB6   A0A182VPT4   A0A1J1IG32   A0A224XLJ7   A0A182G1X6  

KEGG

101740722    K20281 GRIP and coiled-coil domain-containing protein 1 | (RefSeq) GRIP and coiled-coil domain-conta

GO

GO:0030306   GO:0000138   GO:0017137   GO:0048193   GO:0005794   GO:0042803   GO:0000042   GO:0005515   GO:0000287   GO:0004012   GO:0005524   GO:0015914   GO:0016021   GO:0016020   GO:0003707   GO:0051537  

Length:

614

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00251

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00023

outside

1  -  614

 

 

Pi

27.052178

Theta

24.626837

Tajima's D

0.241457

CLR

0.296323

CSRT

0.448477576121194

Interpretation

Uncertain