Gene

KWMTBOMO07525

Annotation

PREDICTED:_uncharacterized_protein_LOC106141703_[Amyelois_transitella]

Location

Bomo_Chr12(+):15725974-15730336      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.35

CDS

ATGGCTAAATGCACCGCCCGTTTTGATGGCATCGCTCGCGATCCGGAGGCCGTTGAAGCGTTTATCGACTCTGTGGAGGTGTACAAGGAGTGTGCGTGCGTCTCCGACGATATCGCATTGCGTGGACTACCAATGCTCATGGAAGGCGAAGCAGCCATATGGTGGAGAGGGGTCCGGAACGAAGTGTCCTCGTGGCCCGACGCTCTCAAAAGGTTACGAGCTATGTATGGTGTGCCACGCCCTGCACATAAAGTTTTTCGTGACGTGTTTTCGTCTGAGCAAGGTGATGAGCTTGCTGACAGTTTCATAGTGAGGATACGTGCTATGCTGTCCAGATTGCCGTACCAGCTACCAGAGGAAGCCAGGTTAGACATAATCTACGGTCTACTTCATAAACGGATAAGGAAAAGACTACCGAGAGATGGTGTGAGCGACATAGAAACACTCATAGAGAAGTCGCGCATGGTGGAGGAGTCACTTGTGGAGTGCCCGGCTGCCCTCAACATTCCGCCGCAGCCACACAAGTCGTTACCTACGGTGTTCGGCGAACGCAGCTCCGCGCCTGACGTGACAAGTGTGAGATCGCCGAGACCTGCCGGCGCTGCCGCTGCGCTAGTGCGCTCCTCCGTTGCTGTTGCACCGTCGTCGCTACCTCAACCGTCCCCATTCCCGCGTAGTGTGAAAAGCGAAACATTGAATAATGAAACCTTGTTAGGAATAGATTTTATTTTGAAGGCACGATTAATAATTGATTTCTCTTCTATGACTTGGCGCTCGGCTGATCAGCCCCGGGACATTCACCCTTTGTCATGTGAAAATTCACGTGACCCCATAAGTTGCGCTTCTATAAACTTGTTGCGCGAGGATGAAGGTAAATTCTTATCGGAGTCGGAAAAGGGGCGTCTGGTGGATTTACTAGGTGAATATACTGATGTTTTCGAGGAAGTCGGTGAGCCGACTCCTTTTTCAGAGCATCGGATCGACACCGGCGACCACCCTCCTATCGCTGTACCTCCGTATCGTGTCACGCCGGCGAGGAAAGAGGTCATGCGCGCCGAGCTCGACAAGATGCTAGCAGAGGACGTGATCGAGGAATGTGAGTCTGCGTGGTCCGCGCCGTGTGTCTTGGTGCCGAAACCTAACGGTACGTATAGGTTTTGTGTTGATTATAGGAAACTGAATGCGGTCACCAAGACCGATTCCTATCCCATGCCTCGAATTGATGAACTTCTTCAGTCTACCAATGGAGGTTGCGTTATGAGCTCGTTGGATCTTCGGAGCGGGTACTGGCAGGTTCAAACCCTGGACAGAGACAAAACTGCTTTTAGTACACCCTTTGGTACCTTTCGTTTTAAGCGTATGCCTTTCGGCTTGAAGAACGCACCGGCAACCTTTCAGAGACTGATTGATTGGTTTCGATCGGGCTCTTCTCTCCAGGAGGTAGCTATCCTGGCGTATCTCGACGATATTTTAGTGATATCAGAAAATATTGATAAGCATTTTTCAGATCTCCGTGCGGTGTTTGACCGGCTCCGCGTGTTCAAGCTGCGAGCCAATAGGGACAAATGCGCTTTTGCCCGGGAGCAAGTCAAATACCTTGGTCACGTGATCTCGAGGTCAGGTATATCTCCAGACAGGGACAAGGTAAGCGCTGTGTTGGATATGAAGGAACCTACATGTCTCCGACAACTTCGTACTTTTCTCCAGACGTGCTCGTGGTTTCGTAAGTTCATCCCGAACTTTGCGAAGATAGCCGAACCACTCACACGATTGACCAAAAAGAGTCAGCCTTGGATTTGGGGCCTGGAGCAGGATGATGCCTTCAAATCTCTTAAGAGGCTACTGACGACATCTCCGATTTTGGTACAGGCAGACTATACTAAGCCTTTCATCCTTAGGACTGACGCGAGTGATTATGCTCTAGGTGCATGTTTGCTCCAGGGGGAGTCATCCAATGATGAGCGTCCCATTGAGTACGCCAGTCGTCTTCTGACATCGGCGGAGCGCAACTATTCGACGACCGAACGGGAGGCGCTCGCTGTCGTCTGGGCTGTGGAGCGATTCCGAGGCTACATCGATGGACATCTGGTGCACGTTCGTAGTGACCATCAGCCCCTGAAATGGTTGTTTTCAGTAAAGTCACCGAGCGGCAGGTTAGTTCGCTGGGCTATGAAGCTTCAAGCTTACGATTTGCAAATTGAGTACACCCCAGGAAAAGTTAATGTGATAGCCGACACGCTTAGCCGCCCAGTGACCGAGCTCAACTCGCCACCGGACTGTGGAATCTGTCCCGTTATCGTCGACGTGCCCCACTGGGATGCCGCTTCGACCCGGGACGCTCAGATGGCTGATCCGGAAATTTCCAAGATTATCACTGATTTGGAAGGGACCGATGAATTATCTGTTAATAGATGGTCTGAACGAGGCTATCTCCTAACTCAAGGCGTTCTATACCGCTACGCCGAAGATTCTGAGTCCGAGGAACCTCAGCTAGTCATACCAGAGAGCTTGCGTGGCAAGGTCATGTTCGAGTGTCATGACTCGCCCACAGCCGCTCACGGGGGGATTCAAAGGACCATTCATCGTATCTCCCAACGATTCTATTTTCCAGGTTTGAGACGCTATGTTACTGAGTATTTGAAAACGTGTATAGAGTGCCAGCGGTACAAGCCGTCTAACTTTAAGCCAGCGGGACTACTCCAGACTCCAGTTCCAGCTCAGCGGTTTGAAGTTATTGCAGTAGACCTTTTCGGGCCTTTACCCAAAGGACCCTGCGGTGAGAGGTGGATCCTGATAGTCGAAGACACCGCCAGTAAGTGGGTTGAGCTGTTCGCTCTCATTGATGCCACTGCCGAGGTATGTGCAAAAACCCTTGTTAATGAAGTCTTTATGAGATTCGGAGTGCCTCGCCGGATGATTTCCGACAACGGAGTTCAATTTGTGGCCGATGTCATGCAAAAGGCTATGTTTGTTTTAGGGGTAAAACAAAATCTCATTCCTCTTTATCATCCCGAAGCCAATCCGGTTGAGCGGAAGAATCGGGACTTAAAGGCTCATCTTGCCATATTGCTTGAAGGCCGTCACCAGCAGTGGCCTGAGGTACTGTCGTTCGTCCGATTCGCTTTTAATAGTTCCGTCTGCACGTCAACCGAGCAAACGCCAGCTTATCTTACCTTTGGTCGTGAGCTCCGATCTCCAATATCCGCTCAGCTGGATCTTCGCGCCATCGTAGAGTCCGAGAACTTTGTCCCCCAGATAAGCCCATATTTGTCCAAGCTTGCCGAGACCATCTCGACCGCTAAGGAGAATATTGAACATCATCAAGATATTCAAAAGACGCGCGCTGATCTAAGGCGCTCTGAACCTTACCAGTTTGCAGAAGGGGATCTCGTATTGATGAAGACCCACGTACTTAGTAATGCTAGTAAAGGTATTACGTCGAAGTTTAATCCTAAGCGGGATGGGCCATATGTGATTTCAAAAAAGGTGAGTCCTACTTCCTACCTTCTAGCATACGAGTCGTCGGGCGAAGTTTTTGGTAAGTATCATGTCTCGGATTTGCGACCTTATCATGCGAGGGAGGATGTATGTCCCGGGCCTGTGATTCCCAAGCGCCGCCGGGGTCGACCGCGTAGGGTGGTGGAGTAG

Protein

MAKCTARFDGIARDPEAVEAFIDSVEVYKECACVSDDIALRGLPMLMEGEAAIWWRGVRNEVSSWPDALKRLRAMYGVPRPAHKVFRDVFSSEQGDELADSFIVRIRAMLSRLPYQLPEEARLDIIYGLLHKRIRKRLPRDGVSDIETLIEKSRMVEESLVECPAALNIPPQPHKSLPTVFGERSSAPDVTSVRSPRPAGAAAALVRSSVAVAPSSLPQPSPFPRSVKSETLNNETLLGIDFILKARLIIDFSSMTWRSADQPRDIHPLSCENSRDPISCASINLLREDEGKFLSESEKGRLVDLLGEYTDVFEEVGEPTPFSEHRIDTGDHPPIAVPPYRVTPARKEVMRAELDKMLAEDVIEECESAWSAPCVLVPKPNGTYRFCVDYRKLNAVTKTDSYPMPRIDELLQSTNGGCVMSSLDLRSGYWQVQTLDRDKTAFSTPFGTFRFKRMPFGLKNAPATFQRLIDWFRSGSSLQEVAILAYLDDILVISENIDKHFSDLRAVFDRLRVFKLRANRDKCAFAREQVKYLGHVISRSGISPDRDKVSAVLDMKEPTCLRQLRTFLQTCSWFRKFIPNFAKIAEPLTRLTKKSQPWIWGLEQDDAFKSLKRLLTTSPILVQADYTKPFILRTDASDYALGACLLQGESSNDERPIEYASRLLTSAERNYSTTEREALAVVWAVERFRGYIDGHLVHVRSDHQPLKWLFSVKSPSGRLVRWAMKLQAYDLQIEYTPGKVNVIADTLSRPVTELNSPPDCGICPVIVDVPHWDAASTRDAQMADPEISKIITDLEGTDELSVNRWSERGYLLTQGVLYRYAEDSESEEPQLVIPESLRGKVMFECHDSPTAAHGGIQRTIHRISQRFYFPGLRRYVTEYLKTCIECQRYKPSNFKPAGLLQTPVPAQRFEVIAVDLFGPLPKGPCGERWILIVEDTASKWVELFALIDATAEVCAKTLVNEVFMRFGVPRRMISDNGVQFVADVMQKAMFVLGVKQNLIPLYHPEANPVERKNRDLKAHLAILLEGRHQQWPEVLSFVRFAFNSSVCTSTEQTPAYLTFGRELRSPISAQLDLRAIVESENFVPQISPYLSKLAETISTAKENIEHHQDIQKTRADLRRSEPYQFAEGDLVLMKTHVLSNASKGITSKFNPKRDGPYVISKKVSPTSYLLAYESSGEVFGKYHVSDLRPYHAREDVCPGPVIPKRRRGRPRRVVE

Uniprot

A0A224XHC7   A0A2L2Y6Q3   D7EM19   V5I839   A0A3B5R366   A0A1Y1MVI4   + More
A0A224XHI1   A0A224X632   L7LV95   L7ML53   A0A146TD60   A0A3P8Q5A9   L7LWL7   A0A2R5LP11   A0A3B3IK80   A0A1E1XKD7   L7LYQ9   L7LYP4   L7MAW1   A0A3B3BX27   A0A1Y1JVH7   A0A147BUF5   A0A1B6IL28   A0A3B5QFT0   L7MCS8   L7LW11   A0A2R5L8F2   A0A1E1X293   A0A3P9MP57   A0A147BLY7   A0A0J7K8R1   L7LY95   L7MFA7   A0A147BST7   A0A131XQ77   A0A147BJI2   A0A023EY78   L7MA76   A0A0J7KPJ7   L7LW12   A0A2R5LEZ4   A0A096XIB4   A0A023EY81   A0A131XRN7   A0A1Z5L5G8   L7MKE1   A0A224X6V5   L7LV55   A0A1Y1LZS5   A0A0A9Z8Q1   A0A131XL91   H3A4B4   L7MBZ6   A0A3B1JJM2   A0A090XDG5   L7MMB3   A0A023EXS9   A0A085NIH7   A0A034V458   A0A164KLJ0   A0A085MWH5   A0A1Y1L0V4   L7LVQ9   A0A1E1XL81   L7MAT3   A0A147BPL7   A0A0V1KKR9   A0A0A9XMW3   A0A0V1GQZ9   A0A0V1KLB2   A0A1Y1N3D6   A0A1Y1MWM5   A0A1B6GUE5   A0A1Y1NGJ5   A0A224Z6Q8   A0A1E1XKL3   A0A147BIK4   A0A0P4ZJW3   A0A0V0RFH3   A0A1E1XK89   A0A0P5WAS7   A0A1Z5L4X0   A0A0V1KLV8  

Pubmed

26561354    18362917    19820115    23542700    28004739    25576852    + More
17554307    29209593    29451363    28503490    29652888    25474469    28528879    25401762    28049606    9215903    25329095    25970599    24929829    25348373    28797301   

EMBL

GFTR01008566    JAW07860.1    IAAA01017336    LAA03833.1    KQ972234    EFA12514.2    + More
GALX01005355    JAB63111.1    GEZM01019359    JAV89692.1    GFTR01008516    JAW07910.1    GFTR01008489    JAW07937.1    GACK01009043    JAA55991.1    GACK01000334    JAA64700.1    GCES01095459    JAQ90863.1    GACK01009042    JAA55992.1    GGLE01007069    MBY11195.1    GFAA01003652    JAT99782.1    GACK01009040    JAA55994.1    GACK01009041    JAA55993.1    GACK01004027    JAA61007.1    GEZM01099479    JAV53309.1    GEGO01001242    JAR94162.1    GECU01030157    GECU01020076    JAS77549.1    JAS87630.1    GACK01004001    JAA61033.1    GACK01009039    JAA55995.1    GGLE01001609    MBY05735.1    GFAC01005811    JAT93377.1    GEGO01003620    JAR91784.1    LBMM01011454    KMQ86828.1    GACK01009195    JAA55839.1    GACK01003086    JAA61948.1    GEGO01001548    JAR93856.1    GEFM01006999    JAP68797.1    GEGO01004488    JAR90916.1    GBBI01004690    JAC14022.1    GACK01004074    JAA60960.1    LBMM01004568    KMQ92283.1    GACK01009237    JAA55797.1    GGLE01003869    MBY07995.1    KF925840    AHN53418.1    GBBI01004634    JAC14078.1    GEFM01006971    JAP68825.1    GFJQ02004522    JAW02448.1    GACK01000363    JAA64671.1    GFTR01008241    JAW08185.1    GACK01009547    JAA55487.1    GEZM01046053    JAV77555.1    GBHO01002002    GBHO01001990    JAG41602.1    JAG41614.1    GEFH01002290    JAP66291.1    AFYH01233110    GACK01003662    JAA61372.1    GBIH01000760    JAC93950.1    GACK01000610    JAA64424.1    GBBI01004637    JAC14075.1    KL367496    KFD69273.1    GAKP01022624    JAC36328.1    LRGB01003288    KZS03371.1    KL367619    KFD61571.1    GEZM01073925    JAV64737.1    GACK01009357    JAA55677.1    GFAA01003693    JAT99741.1    GACK01003909    JAA61125.1    GEGO01002704    JAR92700.1    JYDW01000528    JYDW01000489    KRZ47896.1    KRZ48014.1    GBHO01041895    GBHO01025146    GBHO01025145    GBHO01025144    GBHO01025143    GBHO01014600    GBHO01014569    JAG01709.1    JAG18458.1    JAG18459.1    JAG18460.1    JAG18461.1    JAG29004.1    JAG29035.1    JYDP01000401    KRZ00760.1    JYDW01000462    KRZ48137.1    GEZM01018688    GEZM01018687    GEZM01018685    GEZM01018684    GEZM01018683    GEZM01018682    JAV90067.1    GEZM01018686    JAV90062.1    GECZ01003754    JAS66015.1    GEZM01005662    GEZM01005661    JAV96000.1    GFPF01011317    MAA22463.1    GFAA01003710    JAT99724.1    GEGO01004785    JAR90619.1    GDIP01211711    JAJ11691.1    JYDL01000212    KRX13249.1    GFAA01003702    JAT99732.1    GDIP01088737    GDIP01088736    JAM14979.1    GFJQ02004635    JAW02335.1    JYDW01000481    KRZ48049.1   

Proteomes

UP000007266    UP000002852    UP000265100    UP000001038    UP000261560    UP000265180    + More
UP000036403    UP000008672    UP000018467    UP000076858    UP000054721    UP000055024    UP000054630   

PRIDE

L7MCS8   

Pfam

PF17921   Integrase_H2C2        + More
PF00665   rve
PF17917   RT_RNaseH
PF00078   RVT_1
PF17919   RT_RNaseH_2
PF03732   Retrotrans_gag
PF09668   Asp_protease
PF00098   zf-CCHC
PF00077   RVP

Interpro

IPR012337   RNaseH-like_sf        + More
IPR001584   Integrase_cat-core       
IPR041588   Integrase_H2C2       
IPR036397   RNaseH_sf       
IPR041373   RT_RNaseH       
IPR000477   RT_dom       
IPR021109   Peptidase_aspartic_dom_sf       
IPR041577   RT_RNaseH_2       
IPR005162   Retrotrans_gag_dom       
IPR001969   Aspartic_peptidase_AS       
IPR001995   Peptidase_A2_cat       
IPR003034   SAP_dom       
IPR019103   Peptidase_aspartic_DDI1-type       
IPR036875   Znf_CCHC_sf       
IPR001878   Znf_CCHC       
IPR018061   Retropepsins       

SUPFAM

SSF50630   SSF50630        + More
SSF53098   SSF53098       
SSF57756   SSF57756       

Gene 3D

2.40.70.10     3.30.420.10    

ProteinModelPortal

A0A224XHC7   A0A2L2Y6Q3   D7EM19   V5I839   A0A3B5R366   A0A1Y1MVI4   + More
A0A224XHI1   A0A224X632   L7LV95   L7ML53   A0A146TD60   A0A3P8Q5A9   L7LWL7   A0A2R5LP11   A0A3B3IK80   A0A1E1XKD7   L7LYQ9   L7LYP4   L7MAW1   A0A3B3BX27   A0A1Y1JVH7   A0A147BUF5   A0A1B6IL28   A0A3B5QFT0   L7MCS8   L7LW11   A0A2R5L8F2   A0A1E1X293   A0A3P9MP57   A0A147BLY7   A0A0J7K8R1   L7LY95   L7MFA7   A0A147BST7   A0A131XQ77   A0A147BJI2   A0A023EY78   L7MA76   A0A0J7KPJ7   L7LW12   A0A2R5LEZ4   A0A096XIB4   A0A023EY81   A0A131XRN7   A0A1Z5L5G8   L7MKE1   A0A224X6V5   L7LV55   A0A1Y1LZS5   A0A0A9Z8Q1   A0A131XL91   H3A4B4   L7MBZ6   A0A3B1JJM2   A0A090XDG5   L7MMB3   A0A023EXS9   A0A085NIH7   A0A034V458   A0A164KLJ0   A0A085MWH5   A0A1Y1L0V4   L7LVQ9   A0A1E1XL81   L7MAT3   A0A147BPL7   A0A0V1KKR9   A0A0A9XMW3   A0A0V1GQZ9   A0A0V1KLB2   A0A1Y1N3D6   A0A1Y1MWM5   A0A1B6GUE5   A0A1Y1NGJ5   A0A224Z6Q8   A0A1E1XKL3   A0A147BIK4   A0A0P4ZJW3   A0A0V0RFH3   A0A1E1XK89   A0A0P5WAS7   A0A1Z5L4X0   A0A0V1KLV8  

PDB

4OL8     E-value=8.91344e-74,     Score=709

KEGG

102466450    no KO assigned | (RefSeq) Mir3402, bmo-mir-3402; microRNA 3402

GO

GO:0003676   GO:0015074   GO:0005634   GO:0004190   GO:0008233   GO:0003964   GO:0008270   GO:0016021   GO:0000287   GO:0004012   GO:0005524   GO:0015914   GO:0016020   GO:0003707   GO:0051537  

Length:

1215

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00197

Exp number, first 60 AAs:

0.00113

Total prob of N-in:

0.00009

outside

1  -  1215

 

 

Pi

18.444806

Theta

20.494011

Tajima's D

-1.042107

CLR

66.030559

CSRT

0.128093595320234

Interpretation

Uncertain