Gene
KWMTBOMO07518
Pre Gene Modal
BGIBMGA005884
Annotation
PREDICTED:_LOW_QUALITY_PROTEIN:_remodeling_and_spacing_factor_1-like_[Bombyx_mori]
Location in the cell
Nuclear Reliability : 3.228
Sequence
CDS
ATGCTACAACGACATCTGGTCCGACAGGTCCGCGCGGAGTTGCGGGGCTTGCTGTCGGCCGAGGAGCGCCCCGCGCCGCTGCACGCGCACCCCTCGCTGTCCGAAGGTACATTGTCGGTGGCCGGCTCCCCGCAGCCGTTCAAGCCGGTGTCTGAAGAGCCTAGTGTTATCACGAGAATGCCGCATATGATAAACCAGTTTAGGAACCAGATGATGTACGGAGGCGGCGGTCCCGCGTACGGTCCGCGCGGGCAGGGCGCGGTGTACATGCAGGGCGCCGCACGCTTCCCGCCGCGCTACTACCCGGGCCCCGCGCCCCCCGCCTACCTGCCGCCCCCCGGGCCCCTCAACTACGCGCGCGGGCCCCCGCACCCGATGCCGCCGCGACCGCTCGATGTCCGAGCCCCAGCGCACAATTTGGAATCTCGAGTCCCGCCGCATCATTCTTCAGATACCCGCGTTCCTCCAAATCATGCTTCAGAACTACGCGGATCACCACATCGTGGTCCAGATTTACACGGACCTCCACATCGAGGCCCGGAAGCGCGCGGACCTCCACATCATGGCCCCGAAATGCGAGCCCTACCCAACCATGGACCCGAAATGCGCGGTCCCCCTAACCATGGACCCGAAATGCGCGGTCCCCCTAACCATGGACCCGAAATGCGCGGTCCCCTTAATCATGGACCCGAAATGAGAGGTCCACTTACTCATGGACCCGAAATGAGAAGTCCCTCTAATCACGGGCCCGAAATGAGAGGTCCTCCTAACCACGGGCCTGAAATGAGAGGTCTCGCTAACCACGGGCCTGAAATGAGAGGTCCCTCTAACCATGGGCCTGAAATGAGAGGTCCTCCTAACCATGGGCCTGAAATGAGAGGTCCCCTTAATCATGGACCTGAAATGAGAAGTCCACCTAATCATGGACCCGAAATGAGAAGTCCCCCTAATCATGGGCCCGAAATGAGAGGTCCCCCTAACCATGGGCCTGAAATGAGAGGTCTCCCCAACCACGGGCCTGAAATGAGAGGTCCCTCTAACCATGGGCCTGAAATGAGAGGTCCCCCTAACCATGGGCCTGAAATGAGAGGTCCCCCTAACCATGGGCCTGAAATGAGAGGTCCCCCTAACCATGGGCCTGAAATGAGAGGTCCTCCTAACCATAGGCCTGAAATGAGAGGTCCCCTTAATCATGGTCCCGAAATGAGGGGTCCCCTTAATCATGGACCCGAAATGAGGGGTCCCCCTAATCATGGACCCGAAATGAGAGGTCCCCCTAATCATGGGCCCGAAATGCGACGTCCTCCTACTCTTGGTCTGGAAGTGCGCGTGCCTCCACATCACGGTCATGACGTACATGGACCTCCGCACCACGGGCCGGACGCTCGTGTTCCTCCACAACATGCATCAGATGCACGAGTGAATCAGCACCTGGGTCTAGATGTACGTTTGCCTCCGCATCTTAGTTCTGATGCCAGAGTACCGCCACATCACGGTCCAGATACTCGTGTACCTGCACAACACGCTCCAGACGTGCGAGCTCCTCATCACGGACCAGACCTACGTATACCTCCACATCTTGGCTCGGAGGAACGAGTGCCTTCACAACATGGTGCTGACTTAAGATTACCTCCACATCATGACCCAGAATCTCGTTTGCCTGTACAGCATGGGCCCGATACACGAATACCTCCACATCACGTCCCTGATACACGGATACTAGCACATCACGCCCTAGACTCAAGAATACCCCCACATCACGCTCCAGACTCAAGAATACCTCCACATCACCCTCCAGACTCAAGAATACCTGCACATCACGCTCCAGATTCATCAAGAGTTTCCTCACATCATATACCTGAATCACAGGTTCCTCCACTTCACGCTCCAGAAGCACCGTTACCGACACACAGTGCCCCAGAATCTCGCGCGCCGCCGCACCACGCGCCATCCATACCGCTCCATCCGCTAGACTCGCGGGTTCCACCGCATCTCTTAGACTCTCGCGTTTCTCCGCATTCAATGAACTCACGCGTGTCGCTGCACGCAATGGATTCCCGCATTCCACCCCATCATTTGGAATCGCGCATTCCACCAGTCCCGTCACCGCACGGACCTGGATTCAATCCGGCGAGACTCAGCGTGTCACCCGCGAATCAAAGCATGCAGACCACAAAATCGAGGAGTCCCTCCGCGGGGCCTAGACCCTCGACCCCTGGATCGGAAGCGTCTAAAAGCGCCGGACCTACGCCGCCGCCCGCCACGCTCGGGGCCTCCTCTCCTGCCGCGCCAGTCGTTGATCCCTTCATTCGGATAAAAGCCGAAGTTAAAACCGAACCGGAGTATCGATCACCAGTGGGATCACCGGCGCCGGCCTCGCCCGGACCAACGCCGGAGCCGCTGCGGCATCCTAAGATAAAACATACGGAGAACAAGGACCGGCGACCGCGACACCCGCTGGGCCCGTACGCGCCGCAGTACGGACCGTACGGGCCGTACGCGCCGGGGCCGCTGCCGCGCGGCTTCGTGCCGGAATACGGCGCGCCGGTCCGGGCCGCGCCGCCGGACCCGGACGGCGGGGAGTTCGGCGGCCTCGTCAGCTACTTCTCGAGCCAGCAAGATGCTGACATCGACTCCTAG
Protein
MLQRHLVRQVRAELRGLLSAEERPAPLHAHPSLSEGTLSVAGSPQPFKPVSEEPSVITRMPHMINQFRNQMMYGGGGPAYGPRGQGAVYMQGAARFPPRYYPGPAPPAYLPPPGPLNYARGPPHPMPPRPLDVRAPAHNLESRVPPHHSSDTRVPPNHASELRGSPHRGPDLHGPPHRGPEARGPPHHGPEMRALPNHGPEMRGPPNHGPEMRGPPNHGPEMRGPLNHGPEMRGPLTHGPEMRSPSNHGPEMRGPPNHGPEMRGLANHGPEMRGPSNHGPEMRGPPNHGPEMRGPLNHGPEMRSPPNHGPEMRSPPNHGPEMRGPPNHGPEMRGLPNHGPEMRGPSNHGPEMRGPPNHGPEMRGPPNHGPEMRGPPNHGPEMRGPPNHRPEMRGPLNHGPEMRGPLNHGPEMRGPPNHGPEMRGPPNHGPEMRRPPTLGLEVRVPPHHGHDVHGPPHHGPDARVPPQHASDARVNQHLGLDVRLPPHLSSDARVPPHHGPDTRVPAQHAPDVRAPHHGPDLRIPPHLGSEERVPSQHGADLRLPPHHDPESRLPVQHGPDTRIPPHHVPDTRILAHHALDSRIPPHHAPDSRIPPHHPPDSRIPAHHAPDSSRVSSHHIPESQVPPLHAPEAPLPTHSAPESRAPPHHAPSIPLHPLDSRVPPHLLDSRVSPHSMNSRVSLHAMDSRIPPHHLESRIPPVPSPHGPGFNPARLSVSPANQSMQTTKSRSPSAGPRPSTPGSEASKSAGPTPPPATLGASSPAAPVVDPFIRIKAEVKTEPEYRSPVGSPAPASPGPTPEPLRHPKIKHTENKDRRPRHPLGPYAPQYGPYGPYAPGPLPRGFVPEYGAPVRAAPPDPDGGEFGGLVSYFSSQQDADIDS
Summary
Uniprot
Pubmed
EMBL
Proteomes
PRIDE
ProteinModelPortal
PDB
6FEC
E-value=0.00254346,
Score=100
Ontologies
KEGG
GO
Topology
Length:
879
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01056
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00054
outside
1 - 879
Population Genetic Test Statistics
Pi
14.241702
Theta
16.62738
Tajima's D
-0.537508
CLR
1.008508
CSRT
0.23628818559072
Interpretation
Uncertain
