SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07513
Pre Gene Modal
BGIBMGA005880
Annotation
PREDICTED:_probable_phospholipid-transporting_ATPase_IF_isoform_X1_[Bombyx_mori]
Full name
Phospholipid-transporting ATPase      
Location in the cell
PlasmaMembrane   Reliability : 4.587
 

Sequence

CDS
ATGGTTTCATCTGATAGTCCTGTATCGCCTTTCACAAGCATCGCTCCGTTATCATTCATGGTGTTCGTAACAGCTGTCAAGCAAGGCTACGAAGACTGGCTCAGGCACAAGACTGATAATAAAGTCAACAATCAGATTGTTGAAATAGTCTACAAAGGCGTGATCAAAGAAGTGAAAAATTCCACGATAGCCCCTGGAACCTTGGTTCGTGTAAAACGAGGAAGGGAAGTACCAGCCGACCTCGTGCTCCTCTGTTCCGCCGGAGAGAAGGGAAAATGTTATATCACCACTGCGAATCTGGACGGGGAGACCAATTTGAAAACACTAAGGGTGCCCCCACCTTTAGTCGGGTATACGCCGGACATTTTGCCACAAAACATGCGTATCGAGATACCGAACCCGGTGGCCGACTTGTATACCTTTTATGGACGCCTCGAGATCCCGGGGCTAGACAGCCTGGTGCTGTCCACCGATAACCTCATGCTTAGAGGATCCAGAGTCAAAAATACGGAGTGGGCCATAGGTTGTGCTATTTACACAGGGGAAGAAAGTAAACTGGCTCTCAATTCGAAATACACAGGGAACAAGTTCTCATCGTGCGAACTGGCCGTCAACGGGTTCCTGCTCTTCTTTATTTTGGTATTACTCATCGAGATGGTCGTGTCTTTGATCGCCAAGCTTGTCATAGAGCACAGGAACCCCGAGAAGGACCTGTACCTCGGTCCGGGCACCACGTTCCCGCCGCACGTCTCCGACCTACTTCAGGATCTTTTCTCGTTTCTGCTGCTATATTATTATATCATACCGATGTCTCTGTACGTGACCATCGAGCTTTATAAATTTATAGGAGCACTATTTATCGGATGGGACGAAGACTTTCGCTGCGAGGACACAGGAAGACCGGCGATGGCCAACACATCGGACCTCAACGAAGAGCTAGGTCAGGTCGAGGTTTTGTTCTCAGACAAAACTGGCACCTTAACGAAAAACCTCATGGTGTTCAAGACATGTTCAATCAAAGGCAACGTTTACGAAGAGAGGAGTAACCAGCTGTACAACGTGGAAAGGTTTGAAGAGCCCGTCGATGTGCTTCAGACAGACATCAAATTTTTCTTCAAAATCCTCGCCCTGTGTCATTCGGTTCAAGTTTCCAGTGAAGACATGAAGAAGCTTAGCGCACGACTGTCTGGCGGAGGAGATACTCAACTGATGAACTTCTTTCGAAGGAAAAAACAAAATAAAAATCCCAACAACGGCGTACTGGACAATGTCAGTTGGGACTCGGCCTTGAAAGAAGCTGGCAGTAAAATGGACTACCAAGGCAGCAGCCCCGATGAGAAAGCATTGGTGGAGGCCGCCGATAGAGTGGGAGTCACGTTTTTGGGCGAAGAGGGCAATAATCTCGTATTGAAAGTGGGTGAGAACACGGAAATGTATGAAAGATTGCAACTCATCGAATTCACTTCGGAGAGGAAGAGGATGTCAGTTATTCTTCGTGATAAAGACGGAAAGATATGGTTATTTTGCAAGGGAGCCGAAAGCTCTGTGTTTCCACTGTGCAAAGACTCGGCTCTGGTGGAGGAGGTGAACAGGGACATCAATGCGTTCGCAGTGAAGGGACTGCGGACATTAGCTATTGCTTACAGAGAGATTTCTGACGAGGAATACACTAGAGTCTCCGAAAGCATAAAGCATGTAGACGGAAAGAGCGCGGAGGCTCTGCAGCAACTCACCCAGCAGTACCGGGTTTTAGAACAACAACTGATATTAGTCGGCGCCACTGGAGTCGAGGACTGTCTGCAGGACGACGTGGCCGACACGCTCGCCTCCTTACGAAGAGCTGGCATCAAAACCTGGGTGCTCACTGGGGATAAGGTGGAAACAGCGCTCAACGTGGCCCAGTCGTGCGCGCACATATCGGAGACGGACCGGCGCATGTTCCTGGTCGGGGTGGAGTCGGCCGGCGCGCTGCTCGCCCACCTGGACGAGTGCCGCCGGATCGTCGCCGAGCCCGGCTACCGGGACCTCACGCTGGTGCTGGACGGGACCAGCATGACGCAGCTGCTGGACGCCGGCGCCGCGCAGGCCTTCGTCGATATATCGCTGCAGTGCAACGCCGTGCTGTGCTGCCGACTGTCGCCCATACAGAAGGCTAAGATAGTGAGACTTATAAAGAGCAGTCCGCAGCATCCGATCACGGCCGCTATAGGCGACGGCGCTAATGACATCTCTATGATACAAGAGGCGCACGTCGGCTTCGGTATATTCGGAAGAGAGGGTCATCAGGCCGCGAGATCCGCAGATTTCGCCATAACAAAATTTTCAATGATAAAAAAGTTTTTACTCGTGTTGGGACATTGGTACTATCAGCGGCTGGCGACGCTCATACACTACTTCTTCTACAAAAATCTAGTCTTAGGTAATATAATGTTCGCGTTTCAAATCCAAACGGCCTTTTCGACACAATCGGTATACGACTCGATGTACCTGACGCTGTTCAACCTGCTGTTCACGTCGCTGCCCTGCCTCATCCTGTCGGTGACGGAGCAGCGCTGGCCGGCCGACATGCTGCTCAAAAACCCGACACTGTACAGAAGCATCACGAAGAACAAGCTGATGACGTGGTCTAACTTCGGGGTGTGGTGCCTCTCGGCCGTGTACCACTCTGTTGTCATTTACATGTTCACGTATCTGATATTCGTCGTGCCCGTCATTAATCTCGACGGGAACACTGTCGACTTGTGGTCGTACGGCGCTGCGCTATTCCACCTCACGATGGTCACCGTGAGTCTCAAGCTGTGGCTGCAGGCGCGCTACCACACGCTCGTGTTCGTCGCCTCCACCCTGCTCTCCTTATTCAGCTACCTCGTCTTCAACACGATCTACTCGCTCGTCTATCTACAAATCGACGGTGACGTGCTAGGGACGTACATTCGTTTACTAACATCTCCTGCGTTCGCATTTCTAAACTTGGTGGTTGTGATCGCGACGCTAGTGCCGGACTACTGCGTGCGGCTCGCGTCGGACCGCGGGGGCCGCCCCCGCCACGCGCCCCCCACCCGCGCGCCTCCCGCCGCCCTCTCCACCAGGCTCTAG
Protein
MVSSDSPVSPFTSIAPLSFMVFVTAVKQGYEDWLRHKTDNKVNNQIVEIVYKGVIKEVKNSTIAPGTLVRVKRGREVPADLVLLCSAGEKGKCYITTANLDGETNLKTLRVPPPLVGYTPDILPQNMRIEIPNPVADLYTFYGRLEIPGLDSLVLSTDNLMLRGSRVKNTEWAIGCAIYTGEESKLALNSKYTGNKFSSCELAVNGFLLFFILVLLIEMVVSLIAKLVIEHRNPEKDLYLGPGTTFPPHVSDLLQDLFSFLLLYYYIIPMSLYVTIELYKFIGALFIGWDEDFRCEDTGRPAMANTSDLNEELGQVEVLFSDKTGTLTKNLMVFKTCSIKGNVYEERSNQLYNVERFEEPVDVLQTDIKFFFKILALCHSVQVSSEDMKKLSARLSGGGDTQLMNFFRRKKQNKNPNNGVLDNVSWDSALKEAGSKMDYQGSSPDEKALVEAADRVGVTFLGEEGNNLVLKVGENTEMYERLQLIEFTSERKRMSVILRDKDGKIWLFCKGAESSVFPLCKDSALVEEVNRDINAFAVKGLRTLAIAYREISDEEYTRVSESIKHVDGKSAEALQQLTQQYRVLEQQLILVGATGVEDCLQDDVADTLASLRRAGIKTWVLTGDKVETALNVAQSCAHISETDRRMFLVGVESAGALLAHLDECRRIVAEPGYRDLTLVLDGTSMTQLLDAGAAQAFVDISLQCNAVLCCRLSPIQKAKIVRLIKSSPQHPITAAIGDGANDISMIQEAHVGFGIFGREGHQAARSADFAITKFSMIKKFLLVLGHWYYQRLATLIHYFFYKNLVLGNIMFAFQIQTAFSTQSVYDSMYLTLFNLLFTSLPCLILSVTEQRWPADMLLKNPTLYRSITKNKLMTWSNFGVWCLSAVYHSVVIYMFTYLIFVVPVINLDGNTVDLWSYGAALFHLTMVTVSLKLWLQARYHTLVFVASTLLSLFSYLVFNTIYSLVYLQIDGDVLGTYIRLLTSPAFAFLNLVVVIATLVPDYCVRLASDRGGRPRHAPPTRAPPAALSTRL

Summary

Catalytic Activity
ATP + H(2)O + phospholipid(Side 1) = ADP + phosphate + phospholipid(Side 2).
Similarity
Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
Feature
chain  Phospholipid-transporting ATPase
EC Number
7.6.2.1
EMBL
BABH01030370    BABH01030371    NWSH01001496    PCG71069.1    PCG71070.1    KQ460954    + More
KPJ10254.1    AGBW02011576    OWR46472.1    RSAL01000060    RVE49642.1    ODYU01000832    SOQ36194.1    KQ459592    KPI96871.1    JTDY01000838    KOB75715.1    QOIP01000006    RLU22183.1    ADTU01010853    ADTU01010854    ADTU01010855    KQ434804    KZC06097.1    KQ976417    KYM89670.1    GDIP01181463    JAJ41939.1    GL767291    EFZ13815.1    GDIQ01009216    JAN85521.1    KQ981953    KYN32338.1    GDIP01094734    JAM08981.1    LRGB01001036    KZS13759.1    KQ762207    OAD56072.1    KQ982630    KYQ53419.1    GDIP01126472    JAL77242.1    GDIP01153322    JAJ70080.1    GL732536    EFX83825.1    BDGG01000002    GAU94683.1    GDIQ01130269    GDIQ01033905    JAN60832.1    GDIQ01189587    JAK62138.1    GDIQ01044106    JAN50631.1    GDIQ01170353    JAK81372.1    GDIQ01195584    GDIQ01139058    GDIQ01130268    JAK56141.1    GDIQ01074785    JAN19952.1    GDIP01011466    JAM92249.1    KZS13758.1    GDIQ01074784    JAN19953.1    GDIQ01152304    JAK99421.1    GDIQ01052204    JAN42533.1    GDIQ01152305    JAK99420.1    GDIQ01018874    JAN75863.1    GDIQ01155157    JAK96568.1    AGCU01198561    AGCU01198562    AGCU01198563    AGCU01198564    AGCU01198565    AGCU01198566    JARO02010907    KPP60303.1    NNAY01000185    OXU30197.1    AAZX01001793    AQIB01119177    AQIB01119178    KK501163    KFP13201.1    KK477793    KFQ59527.1    HADW01004270    SBP05670.1    KE161377    EPQ03498.1    AGTP01061711    AGTP01061712    AGTP01061713    AADN05000526    GFFV01000533    JAV39412.1    HAAF01009997    CCP81821.1    KL206809    KFV85952.1    AAEX03017263    AAEX03017264    NDHI03003390    PNJ69033.1    GDIQ01139059    GDIQ01038799    JAN55938.1    KL411359    KFR06025.1    GDIQ01032109    JAN62628.1    KB031155    ELK00742.1    GDIP01051036    JAM52679.1    AKHW03006437    KYO20038.1    KK735892    KFR16375.1    AEYP01017042    AEYP01017043    AEYP01017044    AEYP01017045    AEYP01017046    AEYP01017047    AJFE02113381    AJFE02113382    AACZ04067283    KL515867    KFO88003.1    KK526564    KFP68343.1   
Pfam
PF16212   PhoLip_ATPase_C        + More
PF16209   PhoLip_ATPase_N
PF00400   WD40
Interpro
IPR036412   HAD-like_sf        + More
IPR023214   HAD_sf       
IPR008250   ATPase_P-typ_transduc_dom_A_sf       
IPR023298   ATPase_P-typ_TM_dom_sf       
IPR001757   P_typ_ATPase       
IPR023299   ATPase_P-typ_cyto_dom_N       
IPR006539   P-type_ATPase_IV       
IPR032630   P_typ_ATPase_c       
IPR018303   ATPase_P-typ_P_site       
IPR032631   P-type_ATPase_N       
IPR019775   WD40_repeat_CS       
IPR036322   WD40_repeat_dom_sf       
IPR017986   WD40_repeat_dom       
IPR001680   WD40_repeat       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR030362   ATP11B       
SUPFAM
SSF81653   SSF81653        + More
SSF56784   SSF56784       
SSF81665   SSF81665       
SSF81660   SSF81660       
SSF50978   SSF50978       
PDB
6A69     E-value=3.30497e-14,     Score=195

Ontologies

Topology

Subcellular location
Membrane  
Length:
1031
Number of predicted TMHs:
9
Exp number of AAs in TMHs:
192.95372
Exp number, first 60 AAs:
15.49642
Total prob of N-in:
0.13639
POSSIBLE N-term signal
sequence
outside
1  -  9
TMhelix
10  -  27
inside
28  -  201
TMhelix
202  -  224
outside
225  -  256
TMhelix
257  -  279
inside
280  -  795
TMhelix
796  -  818
outside
819  -  827
TMhelix
828  -  847
inside
848  -  877
TMhelix
878  -  900
outside
901  -  914
TMhelix
915  -  934
inside
935  -  940
TMhelix
941  -  963
outside
964  -  977
TMhelix
978  -  1000
inside
1001  -  1031
 
 

Population Genetic Test Statistics

Pi
18.400294
Theta
17.140457
Tajima's D
-1.14336
CLR
0.735761
CSRT
0.113394330283486
Interpretation
Uncertain
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