SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07512  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA005896
Annotation
PREDICTED:_uncharacterized_protein_LOC101741620_isoform_X1_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.347
 

Sequence

CDS
ATGTGTGACATTGAACTGTTAATTTCACTCGTGAAACAACATCAATGCATCTGGAACGTGGATCATGAAGATTACCACAATCCATATAATAAAGAGCAAGCTTGGAAGGAGATATGTAAAGAAATGTGTGAGAATTGGGATAAAGCGAGTCCAATGGAAAGGAAGCGCGCTTGCTTAGAATGTAAAAAGAAATGGAATAATGTCAGAGGGAACTACCAAAAGGACGTTATAAAAAGACATTTATTGGGGCCGAAAGCAAAAAAAGTTAAAAAGTATTACCATGCTGACGCATTATCTTTTCTGGAACCAATCATACTGAAGAACAAAACAGAATTCGAAACAGTCGACTGTGGGACAGCAGAAGTTAGTACCGAGACAGACGAGGAAGACCACACAGAACCTGTAGAACAAAAATGTATACCAATTGATGATACAACAACAGAATTATCCGAAGATACATCATTATATCCTGTGATAAAAATAATTGAACCGAAGCTTGAGACAGACGAGGATACAATGTTCTTACTGAGTTTTCGGAGTCATATGAAGGAAATGACACAGAGACAAAAACTAAACTTTAAGACTGCAATGCTCAAATTACTGAAAGATAGTTCGAATATGGAACTCAAAAAGAAATGGAATAACGTAAGGGATTCGTATCGTAAAGACGTTATGAAAAGTCAAGCCCTTGGTAGGAATAGTAGGAGGTACATATACGCTGCAGAATTGGAATTCATGGAGCGAATTTTCTTGAGAAATAAATCTGTATTCGAGACCATAAATTGCGAAAGTATAAAAGACCATTTTCAAGACAGCGTTGATTTTAATAGCGAATATTTGGAAGAAGCGTTCGAGCCTGAGTTTGAATTTAAAGCGGGGAGTCCCTCTGGAAACTTCAAAATGGCAACTGGAAATTCAAATAGAAGGAGTCTCAACAGTAAAGACGATGATACGATAGTCGTCGGAGCACCATGGTTCCTAAGGAACCTGGATCTCCATGATGACCTGGAGCTTGACTCAGTCAGTAAGTATCTACAGTCGGCATCATTGCGCCACTTTGAGAAGGCGGCACGACATGAGAACCCTCTTGTCGTGGCCGCTGGAAATTACATACCCGGTCTTGTAGACCGAATGGTAAACAGTCGACGTCACCCAAAACACGTCATTACGGATCCTCCCGACCCATTAACGGTGCTTTTAGGTGCGCTATTGAGGAAGAAATGGAAGAATTTAAGATTGTATTACCGAGACGTAGTATTGAAAAGATACAGTCCTAATTTGGGAGGAAAGCAAGACAGAAAATACGTGTACGCCGAACACTTATCATTCTTGTTGCCGATCATAATGAAATGTAAAACTAAATTTGAGACTGTAAGTTGCAACGGCAGTACAGAGCCTAATCCTGAACCCACTGAATTCGAAACGGCTTACATTCAAGTGAAGATAGAGGGAGAAGATGATGACACAGAAGAGTTGCCGCTAGCTGAGCGATCTGCTCAGTCCACTGGCCATAGCAAACAAGAAAACACCGTGGATTTAAATGATGATGACACATTATTTTTACTGAGTCTCCAAAGTCACATGAGAGATATGGATATGACAAAGAAATTGGATTTCAAGATTTCCGTCATGGATGTCGTGAAGGAATGTATTCCATTCGCTTGA
Protein
MCDIELLISLVKQHQCIWNVDHEDYHNPYNKEQAWKEICKEMCENWDKASPMERKRACLECKKKWNNVRGNYQKDVIKRHLLGPKAKKVKKYYHADALSFLEPIILKNKTEFETVDCGTAEVSTETDEEDHTEPVEQKCIPIDDTTTELSEDTSLYPVIKIIEPKLETDEDTMFLLSFRSHMKEMTQRQKLNFKTAMLKLLKDSSNMELKKKWNNVRDSYRKDVMKSQALGRNSRRYIYAAELEFMERIFLRNKSVFETINCESIKDHFQDSVDFNSEYLEEAFEPEFEFKAGSPSGNFKMATGNSNRRSLNSKDDDTIVVGAPWFLRNLDLHDDLELDSVSKYLQSASLRHFEKAARHENPLVVAAGNYIPGLVDRMVNSRRHPKHVITDPPDPLTVLLGALLRKKWKNLRLYYRDVVLKRYSPNLGGKQDRKYVYAEHLSFLLPIIMKCKTKFETVSCNGSTEPNPEPTEFETAYIQVKIEGEDDDTEELPLAERSAQSTGHSKQENTVDLNDDDTLFLLSLQSHMRDMDMTKKLDFKISVMDVVKECIPFA

Summary

Uniprot
ProteinModelPortal

Ontologies

Topology

Length:
554
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00122
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00020
outside
1  -  554
 
 

Population Genetic Test Statistics

Pi
24.684773
Theta
17.787436
Tajima's D
-1.678054
CLR
0.601608
CSRT
0.0390980450977451
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26385322 MCDIELLISLVKQHQCIWNVDHEDYHNPYNKEQAWKEICKEMCENWDKASPMERKRACLECKKKWNNVRGNYQKDVIKRHLLGPKAKKVKKYYHADALSFLEPIILKNKTEFETVDCGTAEVSTETDEEDHTEPVEQKCIPIDDTTTELSEDTSLYPVIKIIEPKLETDEDTMFLLSFRSHMKEMTQRQKLNFKTAMLKL 100.00 0.0
26385322 MCDIELLISLVKQHQCIWNVDHEDYHNPYNKEQAWKEICKEMCENWDKASPMERKRACLECKKKWNNVRGNYQKDVIKRHLLGPKAKKVKKYYHADALSFLEPIILKNKTEFETVDCGTAEVSTETDEEDHTEPVEQKCIPIDDTTTELSEDTSLYPVIKIIEPKLETDEDTMFLLSFRSHMKEMTQRQKLNFKTAMLKL 98.72 1e-92
26385322 MCFKIKNNCYLKLQHSFTTASLVGSSTKSQCSKLLNTCNSSNSGVHANNCRVHGSNERLEPELNKPKLVIKALTSINWSIFKPNSLFIYEMNTRRRSIAPPPNVYAINAKICHLVKLHPCLYDRHDDNYLRKSTVKNAWKEISNEMRNSVKSCKERWRNIRSSYARSIKLHHGANTYYLNSELKFLQKHITPGVPVPLRG 100.00 0.0
26385322 MCFKIKNNCYLKLQHSFTTASLVGSSTKSQCSKLLNTCNSSNSGVHANNCRVHGSNERLEPELNKPKLVIKALTSINWSIFKPNSLFIYEMNTRRRSIAPPPNVYAINAKICHLVKLHPCLYDRHDDNYLRKSTVKNAWKEISNEMRNSVKSCKERWRNIRSSYARSIKLHHGANTYYLNSELKFLQKHITPGVPVPLRG 98.72 1e-92
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