Gene

KWMTBOMO07510

Annotation

PREDICTED:_ubiquitin-like-conjugating_enzyme_ATG10_isoform_X1_[Amyelois_transitella]

Location

Bomo_Chr12(+):15266798-15268702      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 3.318

CDS

ATGTCTTCCGTGACTTATACAGATTTCATAGAAGCAGCGAAAAATTTTATTGAAATCTCAAATAGATGTTGTGATGGTTGGAAATTTATTGAACACGATAAAGATAAATGCTATTTACGTAAAGAAACATTTTTGAATTATAAAAACGGTGATTATGAACGTTTATTGAAAGCTGATTATGTAATATTTTACAAGGAGAGTTATTGTGTTCCATCCTTTAGTTTTAATGTTTGGAACTCGGCTGGCATGTTGTTGTCATTGGATGATATAAGGACGATGTCTTTGATAAGCATAAACAAAAAAGACTTTTACTCAGTGGTCACACAACAAGAGCATCCAATATTCCAAAGACCGTACTTCATCATTCATCCGTGTCACACCGAATCAGTACTGGCTGCTTTTAAAGACAAATCAAAAAATATAATTGTGACATTTCTAGGCTTGGTTTGTCCTTTGCTTAATATTAATTTACCTCTTGAATATGGAATGTGA

Protein

MSSVTYTDFIEAAKNFIEISNRCCDGWKFIEHDKDKCYLRKETFLNYKNGDYERLLKADYVIFYKESYCVPSFSFNVWNSAGMLLSLDDIRTMSLISINKKDFYSVVTQQEHPIFQRPYFIIHPCHTESVLAAFKDKSKNIIVTFLGLVCPLLNINLPLEYGM

Uniprot

A0A2H1V5T6   A0A2A4JI25   A0A212EK08   A0A0L7L2Y7   A0A0N1PH86   A0A194Q0D0   + More
S4PFP0   Q28YA5   B4J851   A0A067RJW1   A0A0M5IXZ6   A0A2J7PWD6   A0A1W4WBD4   B3MG99   A0A0Q9W0G0   B4ME07   A0A2P8Y044   A0A146LX41   A0A3B0JPL2   A0A0A9WLK0   B4QET6   A0A0J9TVQ3   A0A1B6CTH3   U5EIJ7   A0A1I8NIB2   B4KQ32   Q4V6A8   B4HR87   A0A293LCP4   A0A336KKK8   B3N9D5   Q3ZAP6   A0A336M593   B4P247   B4MQZ2   A0A1J1IS58   W8BAH4   D6X345   B0X8P7   A0A1I8PMS3   A0A2C9LV01   A0A293MIB4   G3MQQ7   Q16I24   A0A1L8DV80   A0A0K8RQH0   Q16TL2   A0A1X7V4U2   A0A0L0CDK0   A0A182GPK4   J9M5L1   A0A131Z6J3   A0A0K8VWS2   K1PT50   A0A2L2YHT8   A0A1Y1N6G1   A0A0A1XHC6   A0A2M4AYS8   A0A1E1X1Z5   A0A1S3IQI9   A0A2S2P6Z2   A0A1S3IRC3   A0A2M4CJ12   C3ZFN7   A0A2I0LUX5   A0A091EGN2   A0A1S3DTL6   U3KDX0   A0A034W9I1   A0A087R6G2   A0A3Q2XY50   R7T4Q0   H0Z992   A0A1V4KE37   A0A2S2QB34   A0A2P6LA25   A0A0A0ALB2   A0A093IYX0   A0A093P849   A0A091VT16   A0A182RIK3   A0A2Z4EUH6   A0A2H8TPW5   A0A1W4ZID3   A0A093I8L8   A0A3Q3LKQ1   N6T1Q7   A0A093CS88   A0A1W4Z9T8   A0A2Z4EUV6   U3ICM1   R4GK76   A0A182WFL4  

Pubmed

22118469    26227816    26354079    23622113    15632085    17994087    + More
23185243    24845553    18057021    29403074    26823975    25401762    22936249    25315136    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    24495485    18362917    19820115    15562597    22216098    17510324    26108605    26483478    26830274    22992520    26561354    28004739    25830018    28503490    18563158    23371554    25348373    23254933    20360741    29885584    23537049    23749191    15592404   

EMBL

ODYU01000832    SOQ36193.1    NWSH01001496    PCG71083.1    AGBW02014349    OWR41827.1    + More
JTDY01003254    KOB69868.1    KQ460954    KPJ10253.1    KQ459592    KPI96870.1    GAIX01006490    JAA86070.1    CM000071    EAL26060.4    KRT02800.1    KRT02801.1    CH916367    EDW01188.1    KK852584    KDR20860.1    CP012524    ALC42268.1    NEVH01020933    PNF20644.1    CH902619    EDV37802.1    CH940662    KRF78476.1    KRF78477.1    EDW58772.2    PYGN01001097    PSN37627.1    GDHC01007403    JAQ11226.1    OUUW01000001    SPP75569.1    GBHO01035298    GBHO01035297    JAG08306.1    JAG08307.1    CM000362    EDX06082.1    CM002911    KMY92108.1    KMY92109.1    KMY92110.1    GEDC01020526    GEDC01002627    JAS16772.1    JAS34671.1    GANO01002610    JAB57261.1    CH933808    EDW08134.2    BT022398    AE013599    BT088901    AAY54814.1    ABV53717.1    ABV53718.2    ACT09398.1    CH480816    EDW46830.1    GFWV01001066    MAA25796.1    UFQS01000382    UFQT01000382    SSX03433.1    SSX23798.1    CH954177    EDV59622.1    BT023823    AAZ86744.1    UFQS01000452    UFQT01000452    SSX04156.1    SSX24521.1    CM000157    EDW89248.1    CH963849    EDW74531.1    CVRI01000059    CRL02984.1    GAMC01008280    JAB98275.1    KQ971372    EFA10325.2    DS232495    EDS42639.1    GFWV01014959    MAA39688.1    JO844208    AEO35825.1    CH478115    EAT33918.1    GFDF01003736    JAV10348.1    GADI01000680    JAA73128.1    CH477646    EAT37838.1    JRES01000655    KNC29549.1    JXUM01078724    KQ563083    KXJ74515.1    ABLF02008896    GEDV01002167    JAP86390.1    GDHF01008987    JAI43327.1    JH817025    EKC27442.1    IAAA01024202    IAAA01024203    LAA07688.1    GEZM01013965    GEZM01013964    JAV92245.1    GBXI01003987    JAD10305.1    GGFK01012628    MBW45949.1    GFAC01006122    JAT93066.1    GGMR01012594    MBY25213.1    GGFL01001158    MBW65336.1    GG666614    EEN48645.1    AKCR02000088    PKK21223.1    KK718505    KFO57083.1    AGTO01001568    GAKP01008167    JAC50785.1    KL226141    KFM09066.1    AMQN01003529    KB312025    ELT88047.1    ABQF01040068    ABQF01040069    LSYS01003952    OPJ82127.1    GGMS01005537    MBY74740.1    MWRG01000743    PRD35409.1    KL872227    KGL94816.1    KK566826    KFW04842.1    KL225475    KFW72576.1    KL409970    KFQ92793.1    MH231827    AWV66634.1    GFXV01003877    MBW15682.1    KL215059    KFV63096.1    APGK01055713    APGK01055714    KB741269    ENN71453.1    KL470662    KFV18750.1    MH231902    AWV66709.1    ADON01012350    ADON01012351    ADON01012352    ADON01012353    ADON01012354    ADON01012355    ADON01012356    ADON01012357    ADON01012358    ADON01012359    AC186822    AC186823   

Proteomes

UP000218220    UP000007151    UP000037510    UP000053240    UP000053268    UP000001819    + More
UP000001070    UP000027135    UP000092553    UP000235965    UP000192221    UP000007801    UP000008792    UP000245037    UP000268350    UP000000304    UP000095301    UP000009192    UP000000803    UP000001292    UP000008711    UP000002282    UP000007798    UP000183832    UP000007266    UP000002320    UP000095300    UP000076420    UP000008820    UP000007879    UP000037069    UP000069940    UP000249989    UP000007819    UP000005408    UP000085678    UP000001554    UP000053872    UP000052976    UP000079169    UP000016665    UP000053286    UP000264820    UP000014760    UP000007754    UP000190648    UP000053858    UP000054081    UP000053283    UP000075900    UP000192224    UP000053875    UP000261640    UP000019118    UP000016666    UP000000539    UP000075920   

PRIDE

Q4V6A8    Q3ZAP6   

Pfam

PF03987   Autophagy_act_C        + More
PF11822   DUF3342

Interpro

IPR007135   Autophagy-rel_prot_3        + More
IPR021777   DUF3342       

ProteinModelPortal

A0A2H1V5T6   A0A2A4JI25   A0A212EK08   A0A0L7L2Y7   A0A0N1PH86   A0A194Q0D0   + More
S4PFP0   Q28YA5   B4J851   A0A067RJW1   A0A0M5IXZ6   A0A2J7PWD6   A0A1W4WBD4   B3MG99   A0A0Q9W0G0   B4ME07   A0A2P8Y044   A0A146LX41   A0A3B0JPL2   A0A0A9WLK0   B4QET6   A0A0J9TVQ3   A0A1B6CTH3   U5EIJ7   A0A1I8NIB2   B4KQ32   Q4V6A8   B4HR87   A0A293LCP4   A0A336KKK8   B3N9D5   Q3ZAP6   A0A336M593   B4P247   B4MQZ2   A0A1J1IS58   W8BAH4   D6X345   B0X8P7   A0A1I8PMS3   A0A2C9LV01   A0A293MIB4   G3MQQ7   Q16I24   A0A1L8DV80   A0A0K8RQH0   Q16TL2   A0A1X7V4U2   A0A0L0CDK0   A0A182GPK4   J9M5L1   A0A131Z6J3   A0A0K8VWS2   K1PT50   A0A2L2YHT8   A0A1Y1N6G1   A0A0A1XHC6   A0A2M4AYS8   A0A1E1X1Z5   A0A1S3IQI9   A0A2S2P6Z2   A0A1S3IRC3   A0A2M4CJ12   C3ZFN7   A0A2I0LUX5   A0A091EGN2   A0A1S3DTL6   U3KDX0   A0A034W9I1   A0A087R6G2   A0A3Q2XY50   R7T4Q0   H0Z992   A0A1V4KE37   A0A2S2QB34   A0A2P6LA25   A0A0A0ALB2   A0A093IYX0   A0A093P849   A0A091VT16   A0A182RIK3   A0A2Z4EUH6   A0A2H8TPW5   A0A1W4ZID3   A0A093I8L8   A0A3Q3LKQ1   N6T1Q7   A0A093CS88   A0A1W4Z9T8   A0A2Z4EUV6   U3ICM1   R4GK76   A0A182WFL4  

KEGG

101741949    K17888 ubiquitin-like-conjugating enzyme ATG10 | (RefSeq) ubiquitin-like-conjugating enzyme ATG10

PATHWAY

04136    Autophagy - other - Bombyx mori (domestic silkworm)
04140    Autophagy - animal - Bombyx mori (domestic silkworm)

GO

GO:0006914   GO:0019777   GO:0016236   GO:0006464   GO:0032446   GO:0006497   GO:0016021   GO:0006983  

Length:

163

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

12.71816

Exp number, first 60 AAs:

0.0035

Total prob of N-in:

0.53739

outside

1  -  163

 

 

Pi

2.158188

Theta

8.792918

Tajima's D

-2.2539

CLR

163.549712

CSRT

0.00339983000849958

Interpretation

Possibly Positive selection