Gene

KWMTBOMO07507

Pre Gene Modal

BGIBMGA005879

Annotation

PREDICTED:_protein_bric-a-brac_1-like_isoform_X3_[Bombyx_mori]

Location

Bomo_Chr12(+):15239078-15246364      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.049

CDS

ATGTGTACCGGATTAAGTAGCCTACAGCAGAACAATGAATTTGTCGACATGACACTAGCAGCCGAAGGTCATTTTGTGAAAGTGCACCAAGTCATAATCGCTCTGTCTAGTCCATATTTCAAGGATCTCCTGGCTTCAGCACCGTGTCAACATCCAGTTGTGTTTCTCAATAAAGTATCATACACAACTTTAAGCTTGATACTGGAGTACATATACACCGGAGAAGTGTACATCAACGTTGAGAACCTATTGGAGCTGATTGAGGCAGCGAAAGAATTGAAGATAAAAGGACTTGAAGACATGAAATTACCCGAAATTACATCTGTTCAAGAGCCTGATGTTGAGGACGAGATGAGCACACAAGAACATGATTACAATGATGAAAATTCACAAATTGAGGCTTTAGAAGAGGGTACATGTTACTTAGAGATATCAAATTTGACCATGGATGAAAAACCTTATATAATAGATGATGACAGTTATTCAGTGGTAGAATGCAAAGAACAGCTATTACAACATGTAACGGATCACACGTACGAAGAGACGATTAAACAGGATCAAAACGCTGATGATACAAACGAAAATGAAACTTTACCTAATTCGGATAAAAATATCACTACTCTATTTAGTAACAATGCAAAAGCTTCCGTGATACAATACACAGTGTCCAATCAAGGCTCATTACAGATGATATTAAACAGATACATATATTATTTGAAGCACACAAACAAGAATAAGTCGCAACAGTGGCGGTGCATAGACTATTTGAACAGCAAGAAATGTCCAGCTTATGTCGTTAGCAAAGACGGTGTCATTATATTAAGGATTTCAGCTCACACACACGCCTTCCACGACAAAAGGATTTTAAAGAAAGTTCGGTCGGGTGTTGTGTTCTCGGCGCTCGACGAAGCAGAGGAACGCGGTTTTGATATAAAGAAAAATAAAAGCTATGATGGAAACAGCGAATAA

Protein

MCTGLSSLQQNNEFVDMTLAAEGHFVKVHQVIIALSSPYFKDLLASAPCQHPVVFLNKVSYTTLSLILEYIYTGEVYINVENLLELIEAAKELKIKGLEDMKLPEITSVQEPDVEDEMSTQEHDYNDENSQIEALEEGTCYLEISNLTMDEKPYIIDDDSYSVVECKEQLLQHVTDHTYEETIKQDQNADDTNENETLPNSDKNITTLFSNNAKASVIQYTVSNQGSLQMILNRYIYYLKHTNKNKSQQWRCIDYLNSKKCPAYVVSKDGVIILRISAHTHAFHDKRILKKVRSGVVFSALDEAEERGFDIKKNKSYDGNSE

Uniprot

A0A2A4JH22   J9QBN1   A0A0N1IEB4   A0A2H1VSC0   A0A2A4JG78   A0A1E1WN00   + More
A0A212EK14   A0A1E1W6C7   A0A2A4K9T4   S4NN21   A0A212EHW9   A0A194R0D4   A0A2A4JGG4   A0A2A4JI35   A0A2H1VAN7   H9J8Q6   A0A2A4KA62   A0A212EHU3   S4PLX9   A0A194PIC4   A0A2H1WEX0   A0A0T6B6S9   N6U288   A0A1Y1K4D4   A0A067RMV3   E2AID6   A0A1Y1L877  

Pubmed

26354079    22118469    23622113    19121390    23537049    28004739    + More
24845553    20798317   

EMBL

NWSH01001496    PCG71076.1    JN790614    AFD01656.1    KQ460954    KPJ10251.1    + More
ODYU01004162    SOQ43735.1    PCG71077.1    GDQN01002828    JAT88226.1    AGBW02014349    OWR41829.1    GDQN01008516    JAT82538.1    NWSH01000030    PCG80543.1    GAIX01014126    JAA78434.1    AGBW02014789    OWR41074.1    KQ460883    KPJ11162.1    PCG71071.1    PCG71072.1    ODYU01001544    SOQ37909.1    BABH01030375    PCG80542.1    OWR41073.1    GAIX01003810    JAA88750.1    KQ459603    KPI92798.1    ODYU01008202    SOQ51601.1    LJIG01009440    KRT83076.1    APGK01052695    KB741213    KB631874    ENN72667.1    ERL86872.1    GEZM01095826    JAV55318.1    KK852529    KDR21955.1    GL439757    EFN66811.1    GEZM01067980    GEZM01067978    GEZM01067977    JAV67287.1   

Proteomes

UP000218220    UP000053240    UP000007151    UP000005204    UP000053268    UP000019118    + More
UP000030742    UP000027135    UP000000311   

PRIDE

H9J8Q6   

Pfam

PF00651   BTB        + More
PF04500   FLYWCH

Interpro

IPR007588   Znf_FLYWCH        + More
IPR011333   SKP1/BTB/POZ_sf       
IPR000210   BTB/POZ_dom       

SUPFAM

SSF54695   SSF54695       

ProteinModelPortal

A0A2A4JH22   J9QBN1   A0A0N1IEB4   A0A2H1VSC0   A0A2A4JG78   A0A1E1WN00   + More
A0A212EK14   A0A1E1W6C7   A0A2A4K9T4   S4NN21   A0A212EHW9   A0A194R0D4   A0A2A4JGG4   A0A2A4JI35   A0A2H1VAN7   H9J8Q6   A0A2A4KA62   A0A212EHU3   S4PLX9   A0A194PIC4   A0A2H1WEX0   A0A0T6B6S9   N6U288   A0A1Y1K4D4   A0A067RMV3   E2AID6   A0A1Y1L877  

PDB

3GA1     E-value=0.00218098,     Score=96

KEGG

101742337    no KO assigned | (RefSeq) protein bric-a-brac 1-like

GO

GO:0005515   GO:0005673   GO:0004553   GO:0042600   GO:0006811   GO:0005509   GO:0016042   GO:0016020   GO:0003707   GO:0051537  

Length:

322

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.04809

Exp number, first 60 AAs:

0.01027

Total prob of N-in:

0.01318

outside

1  -  322

 

 

Pi

16.815347

Theta

15.342409

Tajima's D

-1.511648

CLR

0.767369

CSRT

0.0574471276436178

Interpretation

Uncertain